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gnu: r-scater: Update to 1.12.0. 

* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.0.
[propagated-inputs]: Add r-biocneighbors and r-biocsingular; remove r-plyr,
r-reshape2, and r-rhdf5lib.
This commit is contained in:
Ricardo Wurmus 2019-05-05 23:43:43 +02:00
parent 4540727a21
commit 70d04dc183
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1 changed files with 4 additions and 5 deletions
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gnu/packages/bioinformatics.scm
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@ -10570,28 +10570,27 @@ libraries.")
(define-public r-scater (define-public r-scater
(package (package
(name "r-scater") (name "r-scater")
(version "1.10.1") (version "1.12.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "scater" version)) (uri (bioconductor-uri "scater" version))
(sha256 (sha256
(base32 (base32
"0rijhy7g5qmcn927y1wyd63la1fhyar9fv1hccsqd23jd98yc55a")))) "0qwwkas9va4gsnn1ghg9wznqgr0wq5y3pnf7ym4h6q9qvhky41vk"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-beachmat" ,r-beachmat) `(("r-beachmat" ,r-beachmat)
("r-biocgenerics" ,r-biocgenerics) ("r-biocgenerics" ,r-biocgenerics)
("r-biocneighbors" ,r-biocneighbors)
("r-biocparallel" ,r-biocparallel) ("r-biocparallel" ,r-biocparallel)
("r-biocsingular" ,r-biocsingular)
("r-delayedarray" ,r-delayedarray) ("r-delayedarray" ,r-delayedarray)
("r-delayedmatrixstats" ,r-delayedmatrixstats) ("r-delayedmatrixstats" ,r-delayedmatrixstats)
("r-dplyr" ,r-dplyr) ("r-dplyr" ,r-dplyr)
("r-ggbeeswarm" ,r-ggbeeswarm) ("r-ggbeeswarm" ,r-ggbeeswarm)
("r-ggplot2" ,r-ggplot2) ("r-ggplot2" ,r-ggplot2)
("r-matrix" ,r-matrix) ("r-matrix" ,r-matrix)
("r-plyr" ,r-plyr)
("r-rcpp" ,r-rcpp) ("r-rcpp" ,r-rcpp)
("r-reshape2" ,r-reshape2)
("r-rhdf5lib" ,r-rhdf5lib)
("r-s4vectors" ,r-s4vectors) ("r-s4vectors" ,r-s4vectors)
("r-singlecellexperiment" ,r-singlecellexperiment) ("r-singlecellexperiment" ,r-singlecellexperiment)
("r-summarizedexperiment" ,r-summarizedexperiment) ("r-summarizedexperiment" ,r-summarizedexperiment)