gnu: Add r-mutationalpatterns.
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): New variable.
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@ -7394,6 +7394,39 @@ library implementing most of the pipeline's features.")
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@dfn{RNA-centric annotation system} (RCAS).")
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@dfn{RNA-centric annotation system} (RCAS).")
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(license license:agpl3+)))
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(license license:agpl3+)))
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(define-public r-mutationalpatterns
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(package
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(name "r-mutationalpatterns")
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(version "1.0.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "MutationalPatterns" version))
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(sha256
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(base32
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"1a3c2bm0xx0q4gf98jiw74msmdf2fr8rbsdysd5ww9kqlzmsbr17"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biocgenerics" ,r-biocgenerics)
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("r-biostrings" ,r-biostrings)
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("r-genomicranges" ,r-genomicranges)
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("r-genomeinfodb" ,r-genomeinfodb)
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("r-ggplot2" ,r-ggplot2)
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("r-gridextra" ,r-gridextra)
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("r-iranges" ,r-iranges)
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("r-nmf" ,r-nmf)
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("r-plyr" ,r-plyr)
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("r-pracma" ,r-pracma)
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("r-reshape2" ,r-reshape2)
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("r-summarizedexperiment" ,r-summarizedexperiment)
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("r-variantannotation" ,r-variantannotation)))
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(home-page "http://bioconductor.org/packages/MutationalPatterns/")
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(synopsis "Extract and visualize mutational patterns in genomic data")
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(description "This package provides an extensive toolset for the
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characterization and visualization of a wide range of mutational patterns
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in SNV base substitution data.")
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(license license:expat)))
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(define-public emboss
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(define-public emboss
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(package
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(package
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(name "emboss")
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(name "emboss")
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