gnu: Add python-networkx2.

* gnu/packages/python.scm (python-networkx2, python2-networkx2): New variables.
* gnu/local.mk (dist_patch_DATA): Register 'python-networkx2-reproducible-build.patch'.
* gnu/packages/patches/python-networkx2-reproducible-build.patch: New file.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
This commit is contained in:
Gábor Boskovits 2017-11-06 12:15:32 +01:00 committed by Marius Bakke
parent 2b295f5a2f
commit 75d342ffa9
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GPG Key ID: A2A06DF2A33A54FA
3 changed files with 49 additions and 0 deletions

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@ -996,6 +996,7 @@ dist_patch_DATA = \
%D%/packages/patches/python-genshi-isstring-helper.patch \
%D%/packages/patches/python-genshi-stripping-of-unsafe-script-tags.patch \
%D%/packages/patches/python2-larch-coverage-4.0a6-compatibility.patch \
%D%/packages/patches/python-networkx2-reproducible-build.patch \
%D%/packages/patches/python-nose-timer-drop-ordereddict.patch \
%D%/packages/patches/python-parse-too-many-fields.patch \
%D%/packages/patches/python2-rdflib-drop-sparqlwrapper.patch \

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@ -0,0 +1,29 @@
From c065b972ed294769a41936d6b9feb336473af5d1 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?G=C3=A1bor=20Boskovits?= <boskovits@gmail.com>
Date: Sat, 4 Nov 2017 15:28:47 +0100
Subject: Fix SOURCE_DATE_EPOCH ignored bug (#2735)
* Fix SOURCE_DATE_EPOCH ignored bug
Fix a bug in networkx/release.py that makes build
non-reproducible.
---
networkx/release.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/networkx/release.py b/networkx/release.py
index e81fc0c0..6322cf0d 100644
--- a/networkx/release.py
+++ b/networkx/release.py
@@ -135,7 +135,7 @@ def get_revision():
def get_info(dynamic=True):
# Date information
- date_info = datetime.datetime.now()
+ date_info = datetime.datetime.utcfromtimestamp(int(os.environ.get('SOURCE_DATE_EPOCH', time.time())))
date = time.asctime(date_info.timetuple())
revision, version, version_info, vcs_info = None, None, None, None
--
2.14.2

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@ -6624,6 +6624,25 @@ of the structure, dynamics, and functions of complex networks.")
(define-public python2-networkx
(package-with-python2 python-networkx))
;; Define new package, because the current version of python-colormath does
;; not build against 2.0.
(define-public python-networkx2
(package (inherit python-networkx)
(name "python-networkx2")
(version "2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "networkx" version ".zip"))
(sha256
(base32
"1ajl2jp8qry9nyjzzkqpy0vmsr14d23z1qk7y0vr5iwjbpvzhpyd"))
(patches
(search-patches "python-networkx2-reproducible-build.patch"))))))
(define-public python2-networkx2
(package-with-python2 python-networkx2))
(define-public snakemake
(package
(name "snakemake")