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gnu: sra-tools: Update to 2.8.2-1. 

* gnu/packages/bioinformatics.scm (sra-tools): Update to 2.8.2-1.
[arguments]: Add DEFAULT_CRT and DEFAULT_KFG to make flags.
This commit is contained in:
Ricardo Wurmus 2017-03-16 13:40:36 +01:00
parent d5e1716239
commit 79849358f8
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1 changed files with 9 additions and 3 deletions
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gnu/packages/bioinformatics.scm
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@ -4738,7 +4738,7 @@ sequence itself can be retrieved from these databases.")
(define-public sra-tools (define-public sra-tools
(package (package
(name "sra-tools") (name "sra-tools")
(version "2.7.0") (version "2.8.2-1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
@ -4748,13 +4748,19 @@ sequence itself can be retrieved from these databases.")
(file-name (string-append name "-" version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"13paw7bq6y47d2pl0ac5gpgcqp1xsy1g7v1fwysm3hr8lb2dck17")))) "1camsijmvv2s45mb4iyf44ghl4gkd4rl0viphpcgl3ccchy32a0g"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:parallel-build? #f ; not supported `(#:parallel-build? #f ; not supported
#:tests? #f ; no "check" target #:tests? #f ; no "check" target
#:make-flags #:make-flags
(list (string-append "VDB_LIBDIR=" (list (string-append "DEFAULT_CRT="
(assoc-ref %build-inputs "ncbi-vdb")
"/kfg/certs.kfg")
(string-append "DEFAULT_KFG="
(assoc-ref %build-inputs "ncbi-vdb")
"/kfg/default.kfg")
(string-append "VDB_LIBDIR="
(assoc-ref %build-inputs "ncbi-vdb") (assoc-ref %build-inputs "ncbi-vdb")
,(if (string-prefix? "x86_64" ,(if (string-prefix? "x86_64"
(or (%current-target-system) (or (%current-target-system)