From 7bba95b769e25cd9d1854029a1557d4f97c84235 Mon Sep 17 00:00:00 2001 From: Ben Woodcroft Date: Mon, 19 Sep 2016 12:18:19 +1000 Subject: [PATCH] gnu: seqmagick: Use BioPython 1.66. * gnu/packages/bioinformatics.scm (seqmagick)[inputs]: Use python2-biopython-1.66 instead of python2-biopython. --- gnu/packages/bioinformatics.scm | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5effc80a4c..21fc96e033 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4593,7 +4593,11 @@ bioinformatics file formats, sequence alignment, and more.") ;; https://github.com/fhcrc/seqmagick/issues/55 (replace 'check (lambda _ (zero? (system* "nosetests"))))))) (inputs - `(("python-biopython" ,python2-biopython))) + ;; biopython-1.66 is required due to + ;; https://github.com/fhcrc/seqmagick/issues/59 + ;; When that issue is resolved the 'python2-biopython-1.66' package + ;; should be removed. + `(("python-biopython" ,python2-biopython-1.66))) (native-inputs `(("python-setuptools" ,python2-setuptools) ("python-nose" ,python2-nose)))