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gnu: freebayes: Move bamtools to inputs. 

* gnu/packages/bioinformatics.scm (freebayes)[native-inputs]: Move bamtools
from here...
[inputs]: ...to here.
This commit is contained in:
Ricardo Wurmus 2019-08-09 12:03:14 +02:00
parent db18d87ac3
commit 7cd98e868e
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GPG Key ID: 197A5888235FACAC
1 changed files with 3 additions and 3 deletions
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@ -15119,8 +15119,9 @@ manipulations on VCF files.")
(base32 "1sbzwmcbn78ybymjnhwk7qc5r912azy5vqz2y7y81616yc3ba2a2")))) (base32 "1sbzwmcbn78ybymjnhwk7qc5r912azy5vqz2y7y81616yc3ba2a2"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs (inputs
`(("zlib" ,zlib) `(("bamtools" ,bamtools)
("htslib" ,htslib))) ("htslib" ,htslib)
("zlib" ,zlib)))
(native-inputs (native-inputs
`(("bc" ,bc) ; Needed for running tests. `(("bc" ,bc) ; Needed for running tests.
("samtools" ,samtools) ; Needed for running tests. ("samtools" ,samtools) ; Needed for running tests.
@ -15128,7 +15129,6 @@ manipulations on VCF files.")
("perl" ,perl) ; Needed for running tests. ("perl" ,perl) ; Needed for running tests.
("procps" ,procps) ; Needed for running tests. ("procps" ,procps) ; Needed for running tests.
("python" ,python-2) ; Needed for running tests. ("python" ,python-2) ; Needed for running tests.
("bamtools" ,bamtools)
("vcflib-src" ,(package-source vcflib)) ("vcflib-src" ,(package-source vcflib))
;; These are submodules for the vcflib version used in freebayes. ;; These are submodules for the vcflib version used in freebayes.
;; This package builds against the .o files so we need to extract the source. ;; This package builds against the .o files so we need to extract the source.