gnu: Add r-pore.

* gnu/packages/bioinformatics.scm (r-pore): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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pimi 2018-09-11 16:54:32 +02:00 committed by Ludovic Courtès
parent 45201bf245
commit 7e27393f82
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@ -13736,3 +13736,32 @@ juicer) and single-resolution or multi-resolution @code{.cool} files (for
cooler). Both @code{hic} and @code{cool} files describe Hi-C contact
matrices.")
(license license:expat)))
(define-public r-pore
(package
(name "r-pore")
(version "0.24")
(source
(origin
(method url-fetch)
(uri
(string-append "mirror://sourceforge/rpore/" version
"/poRe_" version ".tar.gz"))
(sha256
(base32 "0pih9nljbv8g4x8rkk29i7aqq681b782r5s5ynp4nw9yzqnmmksv"))))
(properties `((upstream-name . "poRe")))
(build-system r-build-system)
(propagated-inputs
`(("r-bit64" ,r-bit64)
("r-data-table" ,r-data-table)
("r-rhdf5" ,r-rhdf5)
("r-shiny" ,r-shiny)
("r-svdialogs" ,r-svdialogs)))
(home-page "https://sourceforge.net/projects/rpore/")
(synopsis "Visualize Nanopore sequencing data")
(description
"This package provides graphical user interfaces to organize and visualize Nanopore
sequencing data.")
;; This is free software but the license variant is unclear:
;; <https://github.com/mw55309/poRe_docs/issues/10>.
(license license:bsd-3)))