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gnu: r-chippeakanno: Update to 3.18.0. 

* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.0.
[propagated-inputs]: Add r-rtracklayer.
This commit is contained in:
Ricardo Wurmus 2019-05-06 00:09:30 +02:00
parent c24adbbf07
commit 85c1d20fa6
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1 changed files with 17 additions and 16 deletions
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gnu/packages/bioconductor.scm
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@ -1152,44 +1152,45 @@ determining dependencies between variables, code improvement suggestions.")
(define-public r-chippeakanno (define-public r-chippeakanno
(package (package
(name "r-chippeakanno") (name "r-chippeakanno")
(version "3.16.1") (version "3.18.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "ChIPpeakAnno" version)) (uri (bioconductor-uri "ChIPpeakAnno" version))
(sha256 (sha256
(base32 (base32
"1x98d8iwrxjwdz1s5cnvi6flynw9gdkmara9gwf205qxgmy7j3a3")))) "089v16mm5m0rlyyyd0d6rz8gwb852zf3bcdrrw70wanlfjn258q7"))))
(properties `((upstream-name . "ChIPpeakAnno"))) (properties `((upstream-name . "ChIPpeakAnno")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics) `(("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-biocmanager" ,r-biocmanager) ("r-biocmanager" ,r-biocmanager)
("r-biostrings" ,r-biostrings)
("r-delayedarray" ,r-delayedarray)
("r-go-db" ,r-go-db)
("r-biomart" ,r-biomart) ("r-biomart" ,r-biomart)
("r-biostrings" ,r-biostrings)
("r-bsgenome" ,r-bsgenome) ("r-bsgenome" ,r-bsgenome)
("r-dbi" ,r-dbi)
("r-delayedarray" ,r-delayedarray)
("r-ensembldb" ,r-ensembldb)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicfeatures" ,r-genomicfeatures) ("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges) ("r-genomicranges" ,r-genomicranges)
("r-genomeinfodb" ,r-genomeinfodb) ("r-go-db" ,r-go-db)
("r-graph" ,r-graph)
("r-idr" ,r-idr)
("r-iranges" ,r-iranges) ("r-iranges" ,r-iranges)
("r-matrixstats" ,r-matrixstats)
("r-annotationdbi" ,r-annotationdbi)
("r-limma" ,r-limma) ("r-limma" ,r-limma)
("r-matrixstats" ,r-matrixstats)
("r-multtest" ,r-multtest) ("r-multtest" ,r-multtest)
("r-rbgl" ,r-rbgl) ("r-rbgl" ,r-rbgl)
("r-graph" ,r-graph)
("r-regioner" ,r-regioner) ("r-regioner" ,r-regioner)
("r-dbi" ,r-dbi) ("r-rsamtools" ,r-rsamtools)
("r-ensembldb" ,r-ensembldb) ("r-rtracklayer" ,r-rtracklayer)
("r-biobase" ,r-biobase)
("r-s4vectors" ,r-s4vectors) ("r-s4vectors" ,r-s4vectors)
("r-seqinr" ,r-seqinr) ("r-seqinr" ,r-seqinr)
("r-idr" ,r-idr)
("r-genomicalignments" ,r-genomicalignments)
("r-summarizedexperiment" ,r-summarizedexperiment) ("r-summarizedexperiment" ,r-summarizedexperiment)
("r-rsamtools" ,r-rsamtools)
("r-venndiagram" ,r-venndiagram))) ("r-venndiagram" ,r-venndiagram)))
(home-page "http://bioconductor.org/packages/ChIPpeakAnno") (home-page "http://bioconductor.org/packages/ChIPpeakAnno")
(synopsis "Peaks annotation from ChIP-seq and ChIP-chip experiments") (synopsis "Peaks annotation from ChIP-seq and ChIP-chip experiments")