gnu: Add r-savr.
* gnu/packages/bioconductor.scm (r-savr): New variable.
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@ -969,3 +969,29 @@ using pre-clustering with the k-means algorithm. Functions are also provided
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to search for all neighbors within a given distance. Parallelization is
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to search for all neighbors within a given distance. Parallelization is
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achieved for all methods using the BiocParallel framework.")
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achieved for all methods using the BiocParallel framework.")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-savr
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(package
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(name "r-savr")
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(version "1.20.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "savR" version))
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(sha256
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(base32
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"13bwq2a2pygdkmhrcmvz525wsi5i01j911711zgs6x93wj20b2w7"))))
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(properties `((upstream-name . "savR")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-ggplot2" ,r-ggplot2)
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("r-gridextra" ,r-gridextra)
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("r-reshape2" ,r-reshape2)
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("r-scales" ,r-scales)
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("r-xml" ,r-xml)))
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(home-page "https://github.com/bcalder/savR")
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(synopsis "Parse and analyze Illumina SAV files")
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(description
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"This package provides tools to parse Illumina Sequence Analysis
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Viewer (SAV) files, access data, and generate QC plots.")
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(license license:agpl3+)))
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