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251e08301a
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925fcdbb79
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@ -1932,3 +1932,36 @@ performance metrics for evaluation of ranking and binary
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classification (assignment) methods. It also contains a Shiny application for
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classification (assignment) methods. It also contains a Shiny application for
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interactive exploration of results.")
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interactive exploration of results.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-mast
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(package
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(name "r-mast")
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(version "1.8.2")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "MAST" version))
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(sha256
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(base32
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"0rhx655dza0m6yg9jcfz2nmxqahvxx2l91kqgyp7qai0bzz9d9ix"))))
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(properties `((upstream-name . "MAST")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-abind" ,r-abind)
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("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-data-table" ,r-data-table)
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("r-ggplot2" ,r-ggplot2)
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("r-plyr" ,r-plyr)
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("r-progress" ,r-progress)
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("r-reshape2" ,r-reshape2)
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("r-s4vectors" ,r-s4vectors)
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("r-singlecellexperiment" ,r-singlecellexperiment)
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("r-stringr" ,r-stringr)
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("r-summarizedexperiment" ,r-summarizedexperiment)))
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(home-page "https://github.com/RGLab/MAST/")
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(synopsis "Model-based analysis of single cell transcriptomics")
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(description
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"This package provides methods and models for handling zero-inflated
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single cell assay data.")
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(license license:gpl2+)))
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