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gnu: aragorn: Use invoke and simplify. 

* gnu/packages/bioinformatics.scm (aragorn)[arguments]: Use INVOKE in build
phase; simplify install phase.
This commit is contained in:
Ricardo Wurmus 2018-10-20 21:34:20 +02:00
parent 8b4102b903
commit 95758e2faf
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GPG Key ID: 197A5888235FACAC
1 changed files with 16 additions and 17 deletions
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gnu/packages/bioinformatics.scm
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@ -136,24 +136,23 @@
(modify-phases %standard-phases (modify-phases %standard-phases
(delete 'configure) (delete 'configure)
(replace 'build (replace 'build
(lambda _ (lambda _
(zero? (system* "gcc" (invoke "gcc"
"-O3" "-O3"
"-ffast-math" "-ffast-math"
"-finline-functions" "-finline-functions"
"-o" "-o"
"aragorn" "aragorn"
(string-append "aragorn" ,version ".c"))))) (string-append "aragorn" ,version ".c"))
#t))
(replace 'install (replace 'install
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out")) (let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin")) (bin (string-append out "/bin"))
(man (string-append out "/share/man/man1"))) (man (string-append out "/share/man/man1")))
(mkdir-p bin) (install-file "aragorn" bin)
(install-file "aragorn" bin) (install-file "aragorn.1" man))
(mkdir-p man) #t)))))
(install-file "aragorn.1" man))
#t)))))
(home-page "http://mbio-serv2.mbioekol.lu.se/ARAGORN") (home-page "http://mbio-serv2.mbioekol.lu.se/ARAGORN")
(synopsis "Detect tRNA, mtRNA and tmRNA genes in nucleotide sequences") (synopsis "Detect tRNA, mtRNA and tmRNA genes in nucleotide sequences")
(description (description