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gnu: Add bedtools-2.18. 

* gnu/packages/bioinformatics.scm (bedtools-2.18): New variable.
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Ricardo Wurmus 2016-07-12 12:19:15 +02:00
parent 34c553b07e
commit 9a8f309cf1
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1 changed files with 15 additions and 0 deletions
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gnu/packages/bioinformatics.scm
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@ -258,6 +258,21 @@ intervals from multiple files in widely-used genomic file formats such as BAM,
BED, GFF/GTF, VCF.") BED, GFF/GTF, VCF.")
(license license:gpl2))) (license license:gpl2)))
;; Later releases of bedtools produce files with more columns than
;; what Ribotaper expects.
(define-public bedtools-2.18
(package (inherit bedtools)
(name "bedtools")
(version "2.18.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/arq5x/bedtools2/"
"archive/v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"05vrnr8yp7swfagshzpgqmzk1blnwnq8pq5pckzi1m26w98d63vf"))))))
(define-public bioawk (define-public bioawk
(package (package
(name "bioawk") (name "bioawk")