gnu: Add r-anota.

* gnu/packages/bioconductor.scm (r-anota): New variable.
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Ricardo Wurmus 2019-03-25 16:20:00 +01:00
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@ -2671,3 +2671,34 @@ have became important basis for many bioinformatics analysis approaches.
GOSemSim is an R package for semantic similarity computation among GO terms,
sets of GO terms, gene products and gene clusters.")
(license license:artistic2.0)))
(define-public r-anota
(package
(name "r-anota")
(version "1.30.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "anota" version))
(sha256
(base32
"182fp6dpws516y0igvwn6936higfqvy25haa0xs273f8aczr9cf0"))))
(build-system r-build-system)
(propagated-inputs
`(("r-multtest" ,r-multtest)
("r-qvalue" ,r-qvalue)))
(home-page "https://bioconductor.org/packages/anota/")
(synopsis "Analysis of translational activity")
(description
"Genome wide studies of translational control is emerging as a tool to
study verious biological conditions. The output from such analysis is both
the mRNA level (e.g. cytosolic mRNA level) and the levl of mRNA actively
involved in translation (the actively translating mRNA level) for each mRNA.
The standard analysis of such data strives towards identifying differential
translational between two or more sample classes - i.e. differences in
actively translated mRNA levels that are independent of underlying differences
in cytosolic mRNA levels. This package allows for such analysis using partial
variances and the random variance model. As 10s of thousands of mRNAs are
analyzed in parallell the library performs a number of tests to assure that
the data set is suitable for such analysis.")
(license license:gpl3)))