From 9e5ef614aa2b6574c4026533e971d787644cb299 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 20 Nov 2015 15:15:42 +0100 Subject: [PATCH] gnu: ncbi-vdb: Update to 2.5.4. * gnu/packages/bioinformatics.scm (ncbi-vdb): Update to 2.5.4. --- gnu/packages/bioinformatics.scm | 18 ++---------------- 1 file changed, 2 insertions(+), 16 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 017f233cba..0ba09107de 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2399,7 +2399,7 @@ simultaneously.") (define-public ncbi-vdb (package (name "ncbi-vdb") - (version "2.4.5-5") + (version "2.5.4") (source (origin (method url-fetch) @@ -2409,7 +2409,7 @@ simultaneously.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1cj8nk6if8sqagv20vx36v566fdvhcaadf0x1ycnbgql6chbs6vy")))) + "1rcnyc4xkdfcjww2i0s0qrbapys0cxbjcx2sy3qkpslf9f400fgj")))) (build-system gnu-build-system) (arguments `(#:parallel-build? #f ; not supported @@ -2419,20 +2419,6 @@ simultaneously.") 'configure (lambda* (#:key inputs outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) - ;; Only replace the version suffix, not the version number in the - ;; directory name; fixed in commit 4dbba5c6a809 (no release yet). - (substitute* "setup/konfigure.perl" - (((string-append "\\$\\(subst " - "(\\$\\(VERSION[^\\)]*\\))," - "(\\$\\([^\\)]+\\))," - "(\\$\\([^\\)]+\\)|\\$\\@)" - "\\)") - _ pattern replacement target) - (string-append "$(patsubst " - "%" pattern "," - "%" replacement "," - target ")"))) - ;; Override include path for libmagic (substitute* "setup/package.prl" (("name => 'magic', Include => '/usr/include'")