gnu: Add r-beachmat.

* gnu/packages/bioinformatics.scm (r-beachmat): New variable.
master
Ricardo Wurmus 2018-02-12 15:19:00 +01:00
parent 748e9f163a
commit 9ec0898824
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 27 additions and 0 deletions

View File

@ -10484,6 +10484,33 @@ block processing.")
packages.")
(license license:artistic2.0)))
(define-public r-beachmat
(package
(name "r-beachmat")
(version "1.0.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "beachmat" version))
(sha256
(base32
"0b6dzja5fbx4dawb7ixj67mlhw4fy62pfp20mfp918fy96zmdwqz"))))
(build-system r-build-system)
(inputs
`(("hdf5" ,hdf5)))
(propagated-inputs
`(("r-delayedarray" ,r-delayedarray)
("r-hdf5array" ,r-hdf5array)
("r-rcpp" ,r-rcpp)
("r-rhdf5" ,r-rhdf5)
("r-rhdf5lib" ,r-rhdf5lib)))
(home-page "https://bioconductor.org/packages/beachmat")
(synopsis "Compiling Bioconductor to handle each matrix type")
(description "This package provides a consistent C++ class interface for a
variety of commonly used matrix types, including sparse and HDF5-backed
matrices.")
(license license:gpl3)))
(define htslib-for-sambamba
(let ((commit "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5"))
(package