gnu: Add r-all.
* gnu/packages/bioconductor.scm (r-all): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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@ -865,6 +865,34 @@ which were then sequenced to a depth of ~4 million reads per library,
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resulting in a complete gene expression profile for each cell.")
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(license license:artistic2.0)))
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(define-public r-all
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(package
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(name "r-all")
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(version "1.26.0")
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(source (origin
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(method url-fetch)
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;; We cannot use bioconductor-uri here because this tarball is
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;; located under "data/experiment/" instead of "bioc/".
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(uri (string-append "https://www.bioconductor.org/packages/"
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"release/data/experiment/src/contrib/"
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"ALL_" version ".tar.gz"))
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(sha256
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(base32
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"1z7kpjw4ndj6fkxwvhqf3gawhrn26ksrlns7j2c78qzxqmjndik9"))))
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(properties `((upstream-name . "ALL")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)))
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(home-page "https://bioconductor.org/packages/ALL")
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(synopsis "Acute Lymphoblastic Leukemia data from the Ritz laboratory")
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(description
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"The data consist of microarrays from 128 different individuals with
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@dfn{acute lymphoblastic leukemia} (ALL). A number of additional covariates
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are available. The data have been normalized (using rma) and it is the
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jointly normalized data that are available here. The data are presented in
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the form of an @code{exprSet} object.")
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(license license:artistic2.0)))
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;;; Packages
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