From adf7d8135b6fbb96d9d263760e749a7ada21754b Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 29 Mar 2019 18:05:45 +0100 Subject: [PATCH] gnu: Add r-annotationtools. * gnu/packages/bioconductor.scm (r-annotationtools): New variable. --- gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 599f774042..be618d39b9 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3485,3 +3485,28 @@ the brain using an ontology, both provided by the Allen Brain Atlas project.") different identifieres using the Biocore Data Team data-packages (e.g. @code{org.Bt.eg.db}).") (license license:gpl2))) + +(define-public r-annotationtools + (package + (name "r-annotationtools") + (version "1.56.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "annotationTools" version)) + (sha256 + (base32 + "0hqy0mq6pkn05p2dv4pw24p697yvikhdn351adf2ynldy6f3sl9z")))) + (properties + `((upstream-name . "annotationTools"))) + (build-system r-build-system) + (propagated-inputs `(("r-biobase" ,r-biobase))) + (home-page "https://bioconductor.org/packages/annotationTools/") + (synopsis "Annotate microarrays and perform gene expression analyses") + (description + "This package provides functions to annotate microarrays, find orthologs, +and integrate heterogeneous gene expression profiles using annotation and +other molecular biology information available as flat file database (plain +text files).") + ;; Any version of the GPL. + (license (list license:gpl2+))))