gnu: Add r-tfmpvalue.
* gnu/packages/cran.scm (r-tfmpvalue): New variable.
This commit is contained in:
parent
adcd0cc87e
commit
b2e777b27c
|
@ -9024,3 +9024,29 @@ stack groups of columns and to reshape wide data, even when the data are
|
||||||
and which @code{melt} and @code{dcast} from @code{reshape2} do not easily
|
and which @code{melt} and @code{dcast} from @code{reshape2} do not easily
|
||||||
handle.")
|
handle.")
|
||||||
(license license:gpl3)))
|
(license license:gpl3)))
|
||||||
|
|
||||||
|
(define-public r-tfmpvalue
|
||||||
|
(package
|
||||||
|
(name "r-tfmpvalue")
|
||||||
|
(version "0.0.8")
|
||||||
|
(source
|
||||||
|
(origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (cran-uri "TFMPvalue" version))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"0h9qkl15k8v17v3g9bdnfwvh2s04ywjgg5y0xn2077dmywlja1bd"))))
|
||||||
|
(properties `((upstream-name . "TFMPvalue")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs `(("r-rcpp" ,r-rcpp)))
|
||||||
|
(home-page "https://github.com/ge11232002/TFMPvalue")
|
||||||
|
(synopsis "P-value computation for position weight matrices")
|
||||||
|
(description
|
||||||
|
"In putative @dfn{Transcription Factor Binding Sites} (TFBSs)
|
||||||
|
identification from sequence/alignments, we are interested in the significance
|
||||||
|
of certain match scores. TFMPvalue provides the accurate calculation of a
|
||||||
|
p-value with a score threshold for position weight matrices, or the score with
|
||||||
|
a given p-value. It is an interface to code originally made available by
|
||||||
|
Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15.
|
||||||
|
Touzet and Varre (2007).")
|
||||||
|
(license license:gpl2)))
|
||||||
|
|
Loading…
Reference in New Issue