gnu: Add r-inspect.
* gnu/packages/bioconductor.scm (r-inspect): New variable.
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@ -28,6 +28,7 @@
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#:use-module (gnu packages cran)
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#:use-module (gnu packages compression)
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#:use-module (gnu packages graph)
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#:use-module (gnu packages maths)
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#:use-module (gnu packages statistics)
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#:use-module (gnu packages web))
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@ -802,3 +803,39 @@ information.")
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@dfn{Reproducibility-Optimized Test Statistic} (ROTS) for differential testing
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in omics data.")
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(license license:gpl2+)))
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(define-public r-inspect
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(package
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(name "r-inspect")
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(version "1.10.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "INSPEcT" version))
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(sha256
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(base32
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"1gk0pwyimkswrvgb2xr3c2zy4myi448a2shr5ap65rq9pcpp0l8p"))))
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(properties `((upstream-name . "INSPEcT")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-biocparallel" ,r-biocparallel)
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("r-desolve" ,r-desolve)
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("r-genomicalignments" ,r-genomicalignments)
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("r-genomicfeatures" ,r-genomicfeatures)
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("r-genomicranges" ,r-genomicranges)
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("r-iranges" ,r-iranges)
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("r-preprocesscore" ,r-preprocesscore)
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("r-proc" ,r-proc)
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("r-rootsolve" ,r-rootsolve)
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("r-rsamtools" ,r-rsamtools)
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("r-s4vectors" ,r-s4vectors)))
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(home-page "https://bioconductor.org/packages/INSPEcT")
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(synopsis "Analysis of 4sU-seq and RNA-seq time-course data")
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(description
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"INSPEcT (INference of Synthesis, Processing and dEgradation rates in
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Time-Course experiments) analyses 4sU-seq and RNA-seq time-course data in
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order to evaluate synthesis, processing and degradation rates and assess via
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modeling the rates that determines changes in mature mRNA levels.")
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(license license:gpl2)))
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