gnu: Add kaiju.
* gnu/packages/bioinformatics.scm (kaiju): New variable.
This commit is contained in:
parent
99c63f3f07
commit
b9a601d9db
|
@ -3214,6 +3214,44 @@ data.")
|
|||
(supported-systems '("x86_64-linux"))
|
||||
(license license:bsd-3)))
|
||||
|
||||
(define-public kaiju
|
||||
(package
|
||||
(name "kaiju")
|
||||
(version "1.5.0")
|
||||
(source (origin
|
||||
(method url-fetch)
|
||||
(uri (string-append
|
||||
"https://github.com/bioinformatics-centre/kaiju/archive/v"
|
||||
version ".tar.gz"))
|
||||
(file-name (string-append name "-" version ".tar.gz"))
|
||||
(sha256
|
||||
(base32
|
||||
"0afbfalfw9y39bkwnqjrh9bghs118ws1pzj5h8l0nblgn3mbjdks"))))
|
||||
(build-system gnu-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f ; There are no tests.
|
||||
#:phases
|
||||
(modify-phases %standard-phases
|
||||
(delete 'configure)
|
||||
(add-before 'build 'move-to-src-dir
|
||||
(lambda _ (chdir "src") #t))
|
||||
(replace 'install
|
||||
(lambda* (#:key inputs outputs #:allow-other-keys)
|
||||
(let ((bin (string-append (assoc-ref outputs "out") "/bin")))
|
||||
(mkdir-p bin)
|
||||
(chdir "..")
|
||||
(copy-recursively "bin" bin)
|
||||
(copy-recursively "util" bin))
|
||||
#t)))))
|
||||
(inputs
|
||||
`(("perl" ,perl)))
|
||||
(home-page "http://kaiju.binf.ku.dk/")
|
||||
(synopsis "Fast and sensitive taxonomic classification for metagenomics")
|
||||
(description "Kaiju is a program for sensitive taxonomic classification
|
||||
of high-throughput sequencing reads from metagenomic whole genome sequencing
|
||||
experiments.")
|
||||
(license license:gpl3+)))
|
||||
|
||||
(define-public macs
|
||||
(package
|
||||
(name "macs")
|
||||
|
|
Loading…
Reference in New Issue