gnu: Add r-wiggleplotr.

* gnu/packages/bioconductor.scm (r-wiggleplotr): New variable.
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Ricardo Wurmus 2019-04-03 16:13:05 +02:00
parent 8830664d61
commit b9b8b447ec
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@ -4064,3 +4064,35 @@ data for high-throughput, untargeted analyte profiling.")
"Wrench is a package for normalization sparse genomic count data, like
that arising from 16s metagenomic surveys.")
(license license:artistic2.0)))
(define-public r-wiggleplotr
(package
(name "r-wiggleplotr")
(version "1.6.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "wiggleplotr" version))
(sha256
(base32
"12fhbskkjwv4d9bdy3gab8n9pcf7qpwiwgx0248as445vfw8dil3"))))
(build-system r-build-system)
(propagated-inputs
`(("r-assertthat" ,r-assertthat)
("r-cowplot" ,r-cowplot)
("r-dplyr" ,r-dplyr)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
("r-ggplot2" ,r-ggplot2)
("r-iranges" ,r-iranges)
("r-purrr" ,r-purrr)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)))
(home-page "https://bioconductor.org/packages/wiggleplotr/")
(synopsis "Make read coverage plots from BigWig files")
(description
"This package provides tools to visualize read coverage from sequencing
experiments together with genomic annotations (genes, transcripts, peaks).
Introns of long transcripts can be rescaled to a fixed length for better
visualization of exonic read coverage.")
(license license:asl2.0)))