gnu: Add r-bayseq.

* gnu/packages/bioconductor.scm (r-bayseq): New variable.
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Ricardo Wurmus 2018-06-15 07:24:23 +02:00
parent b494bbe466
commit bb15b581f7
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@ -371,3 +371,29 @@ filtered to remove spurious regions in the genome. Downstream steps of
segmentation and calling are also implemented via packages DNAcopy and CGHcall, segmentation and calling are also implemented via packages DNAcopy and CGHcall,
respectively.") respectively.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public r-bayseq
(package
(name "r-bayseq")
(version "2.14.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "baySeq" version))
(sha256
(base32
"0hbmm01a8libara9mbxknpk0wzarwfngnfwlmhpww91a0cmy5klg"))))
(properties `((upstream-name . "baySeq")))
(build-system r-build-system)
(propagated-inputs
`(("r-abind" ,r-abind)
("r-edger" ,r-edger)
("r-genomicranges" ,r-genomicranges)))
(home-page "https://bioconductor.org/packages/baySeq/")
(synopsis "Bayesian analysis of differential expression patterns in count data")
(description
"This package identifies differential expression in high-throughput count
data, such as that derived from next-generation sequencing machines,
calculating estimated posterior likelihoods of differential expression (or
more complex hypotheses) via empirical Bayesian methods.")
(license license:gpl3)))