gnu: Add r-bayseq.
* gnu/packages/bioconductor.scm (r-bayseq): New variable.
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@ -371,3 +371,29 @@ filtered to remove spurious regions in the genome. Downstream steps of
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segmentation and calling are also implemented via packages DNAcopy and CGHcall,
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segmentation and calling are also implemented via packages DNAcopy and CGHcall,
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respectively.")
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respectively.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-bayseq
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(package
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(name "r-bayseq")
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(version "2.14.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "baySeq" version))
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(sha256
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(base32
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"0hbmm01a8libara9mbxknpk0wzarwfngnfwlmhpww91a0cmy5klg"))))
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(properties `((upstream-name . "baySeq")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-abind" ,r-abind)
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("r-edger" ,r-edger)
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("r-genomicranges" ,r-genomicranges)))
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(home-page "https://bioconductor.org/packages/baySeq/")
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(synopsis "Bayesian analysis of differential expression patterns in count data")
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(description
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"This package identifies differential expression in high-throughput count
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data, such as that derived from next-generation sequencing machines,
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calculating estimated posterior likelihoods of differential expression (or
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more complex hypotheses) via empirical Bayesian methods.")
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(license license:gpl3)))
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