gnu: Add hdf4
* gnu/packages/maths.scm (hdf4, hdf4-alt): New variables. * gnu/packages/patches/hdf4-reproducibility.patch: New file. * gnu/packages/patches/hdf4-shared-fortran.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Co-Authored-By: Jeremy Robst <jpro@bas.ac.uk> Signed-off-by: Ludovic Courtès <ludo@gnu.org>master
Thomas Danckaert
Ludovic Courtès
parent
69e7322fdc
commit
becbbefc9b
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@ -573,6 +573,8 @@ dist_patch_DATA = \
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%D%/packages/patches/gtk3-respect-GUIX_GTK3_PATH.patch \
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%D%/packages/patches/gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch \
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%D%/packages/patches/gtkglext-disable-disable-deprecated.patch \
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%D%/packages/patches/hdf4-shared-fortran.patch \
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%D%/packages/patches/hdf4-reproducibility.patch \
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%D%/packages/patches/hdf5-config-date.patch \
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%D%/packages/patches/hdf-eos5-build-shared.patch \
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%D%/packages/patches/hdf-eos5-remove-gctp.patch \
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@ -445,6 +445,65 @@ computations.")
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(home-page "https://github.com/OkoSanto/GCTP")
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(license license:public-domain))) ;https://www2.usgs.gov/laws/info_policies.html
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(define-public hdf4
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(package
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(name "hdf4")
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(version "4.2.11")
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(source
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(origin
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(method url-fetch)
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(uri (string-append "https://support.hdfgroup.org/ftp/HDF/releases/HDF"
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version "/src/hdf-" version ".tar.bz2"))
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(sha256
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(base32 "16yr50j845zlfx20skmw3y75ww77akk9gg0affjqkg66ih5r03mv"))
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(patches (search-patches "hdf4-reproducibility.patch"
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"hdf4-shared-fortran.patch"))))
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(build-system gnu-build-system)
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(native-inputs
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`(("gfortran" ,gfortran)
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("bison" ,bison)
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("flex" ,flex)))
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(inputs
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`(("zlib" ,zlib)
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("libjpeg" ,libjpeg)))
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(arguments
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`(#:parallel-tests? #f
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#:configure-flags '("--enable-shared")
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#:phases
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(modify-phases %standard-phases
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(add-before 'configure 'patchbuild
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(lambda _
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(substitute*
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'("mfhdf/hdfimport/testutil.sh.in" "hdf/util/testutil.sh.in")
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(("/bin/rm") "rm")
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(("/bin/mkdir") "mkdir"))
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(substitute* (find-files "." "^Makefile\\.in$")
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(("@HDF_BUILD_XDR_TRUE@XDR_ADD = \
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-R\\$\\(abs_top_builddir\\)/mfhdf/xdr/\\.libs") "")
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(("@HDF_BUILD_SHARED_TRUE@AM_LDFLAGS = \
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-R\\$\\(abs_top_builddir\\)/mfhdf/libsrc/\\.libs \
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-R\\$\\(abs_top_builddir\\)/hdf/src/\\.libs \\$\\(XDR_ADD\\)") "")))))))
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(home-page "https://www.hdfgroup.org/products/hdf4/")
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(synopsis
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"Library and multi-object file format for storing and managing data")
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(description "HDF4 is a library and multi-object file format for storing
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and managing data between machines. HDF4 is an older hierarchical data format,
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incompatible with HDF5.")
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(license
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(license:non-copyleft
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"https://www.hdfgroup.org/ftp/HDF/HDF_Current/src/unpacked/COPYING"))))
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(define-public hdf4-alt
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(package
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(inherit hdf4)
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(name "hdf4-alt")
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(arguments
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(substitute-keyword-arguments (package-arguments hdf4)
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((#:configure-flags flags) `(cons* "--disable-netcdf" ,flags))))
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(synopsis
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"HDF4 without netCDF API, can be combined with the regular netCDF library")))
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(define-public hdf5
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(package
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(name "hdf5")
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@ -0,0 +1,35 @@
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Remove/patch unreproducible config data.
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diff --git a/configure b/configure
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index eb9f346..ebab94d 100755
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--- a/configure
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+++ b/configure
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@@ -23163,7 +23163,7 @@ H4_VERSION="`cut -d' ' -f3 $srcdir/README.txt | head -1`"
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## Configuration date
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- CONFIG_DATE="`date`"
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+CONFIG_DATE=`date -u -d "@$SOURCE_DATE_EPOCH"`
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## User doing the configuration
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CONFIG_USER="`whoami`@`hostname`"
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diff --git a/libhdf4.settings.in b/libhdf4.settings.in
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index 1d9bbb9..4180d72 100644
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--- a/libhdf4.settings.in
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+++ b/libhdf4.settings.in
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@@ -5,10 +5,10 @@ General Information:
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-------------------
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HDF4 Version: @H4_VERSION@
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Configured on: @CONFIG_DATE@
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- Configured by: @CONFIG_USER@
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+ Configured by: guix
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Configure mode: @CONFIG_MODE@
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- Host system: @host_cpu@-@host_vendor@-@host_os@
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- Uname information: @UNAME_INFO@
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+ Host system: guix
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+ Uname information: guix
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Libraries: @STATIC_SHARED@
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Installation point: @prefix@
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--
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2.10.0
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@ -0,0 +1,25 @@
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Allow building a shared library with Fortran.
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---
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configure | 6 ------
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1 file changed, 6 deletions(-)
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diff --git a/configure b/configure
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index f37d2fa..eb9f346 100755
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--- a/configure
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+++ b/configure
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@@ -6141,12 +6141,6 @@ if test "X${enable_shared}" != "Xyes"; then
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enable_shared="no"
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fi
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-if test "X${enable_shared}" = "Xyes"; then
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- if test "X${BUILD_FORTRAN}" = "Xyes"; then
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- as_fn_error $? "Cannot build shared fortran libraries. Please configure with --disable-fortran flag." "$LINENO" 5
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- fi
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-fi
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-
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{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether ln -s works" >&5
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$as_echo_n "checking whether ln -s works... " >&6; }
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--
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2.10.0
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