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gnu: sra-tools: Use "modify-phases" syntax. 

* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use "modify-phases"
syntax.
This commit is contained in:
Ricardo Wurmus 2017-04-05 17:48:26 +02:00 committed by Ricardo Wurmus
parent fc5b12879f
commit beebe43176
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1 changed files with 41 additions and 42 deletions
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@ -4790,8 +4790,8 @@ sequence itself can be retrieved from these databases.")
"/lib64" "/lib64"
"/lib32"))) "/lib32")))
#:phases #:phases
(alist-replace (modify-phases %standard-phases
'configure (replace 'configure
(lambda* (#:key inputs outputs #:allow-other-keys) (lambda* (#:key inputs outputs #:allow-other-keys)
;; The build system expects a directory containing the sources and ;; The build system expects a directory containing the sources and
;; raw build output of ncbi-vdb, including files that are not ;; raw build output of ncbi-vdb, including files that are not
@ -4832,8 +4832,7 @@ sequence itself can be retrieved from these databases.")
(string-append "--with-ngs-sdk-prefix=" (string-append "--with-ngs-sdk-prefix="
(assoc-ref inputs "ngs-sdk")) (assoc-ref inputs "ngs-sdk"))
(string-append "--with-hdf5-prefix=" (string-append "--with-hdf5-prefix="
(assoc-ref inputs "hdf5"))))) (assoc-ref inputs "hdf5")))))))))
%standard-phases)))
(native-inputs `(("perl" ,perl))) (native-inputs `(("perl" ,perl)))
(inputs (inputs
`(("ngs-sdk" ,ngs-sdk) `(("ngs-sdk" ,ngs-sdk)