gnu: Add Biostrings.

* gnu/packages/bioinformatics.scm (r-biostrings): New variable.
master
Ricardo Wurmus 2015-12-18 14:07:32 +01:00
parent e91d362e48
commit bf15935337
1 changed files with 26 additions and 0 deletions

View File

@ -3569,6 +3569,32 @@ functions for parallel evaluation, tailored to use with Bioconductor
objects.")
(license (list license:gpl2+ license:gpl3+))))
(define-public r-biostrings
(package
(name "r-biostrings")
(version "2.38.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "Biostrings" version))
(sha256
(base32
"1afp9szc8ci6jn0m3hrrqh6df65cpw3v1dcnl6xir3d3m3lwwmk4"))))
(properties
`((upstream-name . "Biostrings")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-iranges" ,r-iranges)
("r-s4vectors" ,r-s4vectors)
("r-xvector" ,r-xvector)))
(home-page "http://bioconductor.org/packages/Biostrings")
(synopsis "String objects and algorithms for biological sequences")
(description
"This package provides memory efficient string containers, string
matching algorithms, and other utilities, for fast manipulation of large
biological sequences or sets of sequences.")
(license license:artistic2.0)))
(define-public r-qtl
(package
(name "r-qtl")