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gnu: r-wgcna: Move to (gnu packages cran). 

* gnu/packages/bioinformatics.scm (r-wgcna): Move from here...
* gnu/packages/cran.scm (r-wgcna): ...to here.
This commit is contained in:
Ricardo Wurmus 2019-03-25 14:05:09 +01:00
parent 72a216a9d0
commit c5a2b518ad
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2 changed files with 39 additions and 39 deletions
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39
gnu/packages/bioinformatics.scm
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@ -8466,45 +8466,6 @@ characterization and visualization of a wide range of mutational patterns
in SNV base substitution data.") in SNV base substitution data.")
(license license:expat))) (license license:expat)))
(define-public r-wgcna
(package
(name "r-wgcna")
(version "1.66")
(source
(origin
(method url-fetch)
(uri (cran-uri "WGCNA" version))
(sha256
(base32
"0rhnyhzfn93yp24jz9v6dzrmyizwzdw070a7idm0k33w1cm8sjqv"))))
(properties `((upstream-name . "WGCNA")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-doparallel" ,r-doparallel)
("r-dynamictreecut" ,r-dynamictreecut)
("r-fastcluster" ,r-fastcluster)
("r-foreach" ,r-foreach)
("r-go-db" ,r-go-db)
("r-hmisc" ,r-hmisc)
("r-impute" ,r-impute)
("r-rcpp" ,r-rcpp)
("r-robust" ,r-robust)
("r-survival" ,r-survival)
("r-matrixstats" ,r-matrixstats)
("r-preprocesscore" ,r-preprocesscore)))
(home-page
"http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/")
(synopsis "Weighted correlation network analysis")
(description
"This package provides functions necessary to perform Weighted
Correlation Network Analysis on high-dimensional data. It includes functions
for rudimentary data cleaning, construction and summarization of correlation
networks, module identification and functions for relating both variables and
modules to sample traits. It also includes a number of utility functions for
data manipulation and visualization.")
(license license:gpl2+)))
(define-public r-chipkernels (define-public r-chipkernels
(let ((commit "c9cfcacb626b1221094fb3490ea7bac0fd625372") (let ((commit "c9cfcacb626b1221094fb3490ea7bac0fd625372")
(revision "1")) (revision "1"))

39
gnu/packages/cran.scm
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@ -12715,3 +12715,42 @@ authoring books and technical documents with R Markdown.")
@code{optparse} library to be used with Rscript to write shebang scripts @code{optparse} library to be used with Rscript to write shebang scripts
that accept short and long options.") that accept short and long options.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public r-wgcna
(package
(name "r-wgcna")
(version "1.66")
(source
(origin
(method url-fetch)
(uri (cran-uri "WGCNA" version))
(sha256
(base32
"0rhnyhzfn93yp24jz9v6dzrmyizwzdw070a7idm0k33w1cm8sjqv"))))
(properties `((upstream-name . "WGCNA")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-doparallel" ,r-doparallel)
("r-dynamictreecut" ,r-dynamictreecut)
("r-fastcluster" ,r-fastcluster)
("r-foreach" ,r-foreach)
("r-go-db" ,r-go-db)
("r-hmisc" ,r-hmisc)
("r-impute" ,r-impute)
("r-rcpp" ,r-rcpp)
("r-robust" ,r-robust)
("r-survival" ,r-survival)
("r-matrixstats" ,r-matrixstats)
("r-preprocesscore" ,r-preprocesscore)))
(home-page
"http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/")
(synopsis "Weighted correlation network analysis")
(description
"This package provides functions necessary to perform Weighted
Correlation Network Analysis on high-dimensional data. It includes functions
for rudimentary data cleaning, construction and summarization of correlation
networks, module identification and functions for relating both variables and
modules to sample traits. It also includes a number of utility functions for
data manipulation and visualization.")
(license license:gpl2+)))