nixo
/
guix-devel
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity

import cran: Exclude experiment packages in predicate "bioconductor-package?". 

* guix/import/cran.scm (bioconductor-package?): Exclude experiment packages,
because they cannot be updated with the default bioconductor updater.
master
Ricardo Wurmus 2017-04-05 18:42:05 +02:00
parent 7c9fcb0825
commit c9ffa91fd3
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 3 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

4
guix/import/cran.scm
View File

@ -433,7 +433,9 @@ dependencies."
;; the Github mirror, so we have to exclude them
;; from the set of bioconductor packages that can be
;; updated automatically.
(not (string-contains uri "/data/annotation/"))))))
(not (string-contains uri "/data/annotation/"))
;; Experiment packages are in a separate repository.
(not (string-contains uri "/data/experiment/"))))))
(and (string-prefix? "r-" (package-name package))
(match (and=> (package-source package) origin-uri)
((? string? uri)