gnu: Add r-copyhelper.

* gnu/packages/bioinformatics.scm (r-copyhelper): New variable.
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Ricardo Wurmus 2017-01-04 16:25:20 +01:00 committed by Ricardo Wurmus
parent 6193563a36
commit d407bdb931
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@ -7894,3 +7894,29 @@ common bioinformatics tools.")
"This package provides tools for processing short read data from ChIPseq "This package provides tools for processing short read data from ChIPseq
experiments.") experiments.")
(license license:artistic2.0))) (license license:artistic2.0)))
(define-public r-copyhelper
(package
(name "r-copyhelper")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (string-append "http://bioconductor.org/packages/release/"
"data/experiment/src/contrib/CopyhelpeR_"
version ".tar.gz"))
(sha256
(base32
"0x7cyynjmxls9as2gg0iyp9x5fpalxmdjq914ss7i84i9zyk5bhq"))))
(properties `((upstream-name . "CopyhelpeR")))
(build-system r-build-system)
(home-page "http://bioconductor.org/packages/CopyhelpeR/")
(synopsis "Helper files for CopywriteR")
(description
"This package contains the helper files that are required to run the
Bioconductor package CopywriteR. It contains pre-assembled 1kb bin GC-content
and mappability files for the reference genomes hg18, hg19, hg38, mm9 and
mm10. In addition, it contains a blacklist filter to remove regions that
display copy number variation. Files are stored as GRanges objects from the
GenomicRanges Bioconductor package.")
(license license:gpl2)))