gnu: Add r-aroma-light.

* gnu/packages/bioinformatics.scm (r-aroma-light): New variable.
master
Ricardo Wurmus 2017-05-17 16:36:35 +02:00
parent fd3782d13b
commit d4b83651d1
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@ -8994,6 +8994,33 @@ algorithms; density clustering, hierarchical clustering, k-means, and the
discovery of differentially expressed genes and markers.")
(license license:gpl3))))
(define-public r-aroma-light
(package
(name "r-aroma-light")
(version "3.6.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "aroma.light" version))
(sha256
(base32
"10snykmmx36qaymyf5s1n1km8hsscyzpykcpf0mzsrcv8ml9rp8a"))))
(properties `((upstream-name . "aroma.light")))
(build-system r-build-system)
(propagated-inputs
`(("r-matrixstats" ,r-matrixstats)
("r-r-methodss3" ,r-r-methodss3)
("r-r-oo" ,r-r-oo)
("r-r-utils" ,r-r-utils)))
(home-page "https://github.com/HenrikBengtsson/aroma.light")
(synopsis "Methods for normalization and visualization of microarray data")
(description
"This package provides methods for microarray analysis that take basic
data types such as matrices and lists of vectors. These methods can be used
standalone, be utilized in other packages, or be wrapped up in higher-level
classes.")
(license license:gpl2+)))
(define htslib-for-sambamba
(let ((commit "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5"))
(package