gnu: r-org-hs-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Move from here... * gnu/packages/bioconductor.scm (r-org-hs-eg-db): ...to here.master
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@ -438,6 +438,32 @@ annotations for the genome of the model fruit fly Drosophila melanogaster.")
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based on mapping using Entrez Gene identifiers.")
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based on mapping using Entrez Gene identifiers.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-org-hs-eg-db
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(package
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(name "r-org-hs-eg-db")
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(version "3.7.0")
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(source (origin
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(method url-fetch)
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;; We cannot use bioconductor-uri here because this tarball is
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;; located under "data/annotation/" instead of "bioc/".
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(uri (string-append "https://www.bioconductor.org/packages/"
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"release/data/annotation/src/contrib/"
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"org.Hs.eg.db_" version ".tar.gz"))
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(sha256
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(base32
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"1qxz9l80yg3qdqszs6dsscp7lrpfi1bgd0pxh9j7q34vprzwhdim"))))
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(properties
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`((upstream-name . "org.Hs.eg.db")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)))
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(home-page "https://www.bioconductor.org/packages/org.Hs.eg.db/")
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(synopsis "Genome wide annotation for Human")
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(description
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"This package contains genome-wide annotations for Human, primarily based
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on mapping using Entrez Gene identifiers.")
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(license license:artistic2.0)))
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(define-public r-bsgenome-hsapiens-ucsc-hg19
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(define-public r-bsgenome-hsapiens-ucsc-hg19
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(package
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(package
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(name "r-bsgenome-hsapiens-ucsc-hg19")
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(name "r-bsgenome-hsapiens-ucsc-hg19")
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@ -7980,32 +7980,6 @@ genomation package. Included are Chip Seq, Methylation and Cage data,
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downloaded from Encode.")
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downloaded from Encode.")
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(license license:gpl3+)))
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(license license:gpl3+)))
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(define-public r-org-hs-eg-db
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(package
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(name "r-org-hs-eg-db")
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(version "3.7.0")
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(source (origin
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(method url-fetch)
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;; We cannot use bioconductor-uri here because this tarball is
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;; located under "data/annotation/" instead of "bioc/".
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(uri (string-append "https://www.bioconductor.org/packages/"
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"release/data/annotation/src/contrib/"
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"org.Hs.eg.db_" version ".tar.gz"))
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(sha256
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(base32
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"1qxz9l80yg3qdqszs6dsscp7lrpfi1bgd0pxh9j7q34vprzwhdim"))))
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(properties
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`((upstream-name . "org.Hs.eg.db")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)))
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(home-page "https://www.bioconductor.org/packages/org.Hs.eg.db/")
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(synopsis "Genome wide annotation for Human")
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(description
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"This package contains genome-wide annotations for Human, primarily based
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on mapping using Entrez Gene identifiers.")
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(license license:artistic2.0)))
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(define-public r-org-mm-eg-db
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(define-public r-org-mm-eg-db
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(package
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(package
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(name "r-org-mm-eg-db")
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(name "r-org-mm-eg-db")
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