gnu: Add r-wgcna.
* gnu/packages/bioinformatics.scm (r-wgcna): New variable.
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@ -7541,6 +7541,42 @@ characterization and visualization of a wide range of mutational patterns
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in SNV base substitution data.")
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(license license:expat)))
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(define-public r-wgcna
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(package
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(name "r-wgcna")
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(version "1.51")
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(source
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(origin
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(method url-fetch)
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(uri (cran-uri "WGCNA" version))
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(sha256
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(base32
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"0hzvnhw76vwg8bl8x368f0c5szpwb8323bmrb3bir93i5bmfjsxx"))))
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(properties `((upstream-name . "WGCNA")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)
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("r-doparallel" ,r-doparallel)
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("r-dynamictreecut" ,r-dynamictreecut)
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("r-fastcluster" ,r-fastcluster)
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("r-foreach" ,r-foreach)
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("r-go-db" ,r-go-db)
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("r-hmisc" ,r-hmisc)
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("r-impute" ,r-impute)
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("r-matrixstats" ,r-matrixstats)
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("r-preprocesscore" ,r-preprocesscore)))
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(home-page
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"http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/")
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(synopsis "Weighted correlation network analysis")
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(description
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"This package provides functions necessary to perform Weighted
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Correlation Network Analysis on high-dimensional data. It includes functions
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for rudimentary data cleaning, construction and summarization of correlation
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networks, module identification and functions for relating both variables and
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modules to sample traits. It also includes a number of utility functions for
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data manipulation and visualization.")
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(license license:gpl2+)))
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(define-public emboss
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(package
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(name "emboss")
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