gnu: Add insight-toolkit.

* gnu/packages/image-processing.scm (insight-toolkit): New variable.
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Ricardo Wurmus 2019-08-13 18:55:46 +02:00 committed by Ricardo Wurmus
parent 4243af4e57
commit d7701e1b94
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@ -36,6 +36,7 @@
#:use-module (gnu packages algebra)
#:use-module (gnu packages bison)
#:use-module (gnu packages boost)
#:use-module (gnu packages check)
#:use-module (gnu packages compression)
#:use-module (gnu packages documentation)
#:use-module (gnu packages flex)
@ -60,6 +61,7 @@
#:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages serialization)
#:use-module (gnu packages tbb)
#:use-module (gnu packages tls)
#:use-module (gnu packages video)
#:use-module (gnu packages xiph)
@ -608,3 +610,64 @@ libraries designed for computer vision research and implementation.")
`(#:configure-flags
;; Needed for itk-snap
(list "-DVNL_CONFIG_LEGACY_METHODS=ON")))))
(define-public insight-toolkit
(package
(name "insight-toolkit")
(version "5.0.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/InsightSoftwareConsortium/ITK/"
"releases/download/v" version "/InsightToolkit-"
version ".tar.xz"))
(sha256
(base32 "0bs63mk4q8jmx38f031jy5w5n9yy5ng9x8ijwinvjyvas8cichqi"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; tests require network access and external data
#:configure-flags
'("-DITK_USE_GPU=ON"
"-DITK_USE_SYSTEM_LIBRARIES=ON"
"-DITK_USE_SYSTEM_GOOGLETEST=ON"
"-DITK_BUILD_SHARED=ON"
;; This prevents "GTest::GTest" from being added to the ITK_LIBRARIES
;; variable in the installed CMake files. This is necessary as other
;; packages using insight-toolkit could not be configured otherwise.
"-DGTEST_ROOT=gtest")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'do-not-tune
(lambda _
(substitute* "CMake/ITKSetStandardCompilerFlags.cmake"
(("-mute=native") ""))
#t)))))
(inputs
`(("eigen" ,eigen)
("expat" ,expat)
("fftw" ,fftw)
("fftwf" ,fftwf)
("hdf5" ,hdf5)
("libjpeg" ,libjpeg)
("libpng" ,libpng)
("libtiff" ,libtiff)
("mesa" ,mesa-opencl)
("perl" ,perl)
("python" ,python)
("tbb" ,tbb)
("vxl" ,vxl-1)
("zlib" ,zlib)))
(native-inputs
`(("googletest" ,googletest)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/InsightSoftwareConsortium/ITK/")
(synopsis "Scientific image processing, segmentation and registration")
(description "The Insight Toolkit (ITK) is a toolkit for N-dimensional
scientific image processing, segmentation, and registration. Segmentation is
the process of identifying and classifying data found in a digitally sampled
representation. Typically the sampled representation is an image acquired
from such medical instrumentation as CT or MRI scanners. Registration is the
task of aligning or developing correspondences between data. For example, in
the medical environment, a CT scan may be aligned with a MRI scan in order to
combine the information contained in both.")
(license license:asl2.0)))