nixo
/
guix-devel
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity

gnu: r-scran: Update to 1.8.2. 

* gnu/packages/bioinformatics.scm (r-scran): Update to 1.8.2.
[propagated-inputs]: Remove r-zoo; add r-delayedmatrixstats and r-delayedarray.
This commit is contained in:
Ricardo Wurmus 2018-06-02 13:35:20 +02:00
parent 8ec56b2956
commit d7e3299987
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 5 additions and 4 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

9
gnu/packages/bioinformatics.scm
View File

@ -10888,19 +10888,21 @@ quality control.")
(define-public r-scran (define-public r-scran
(package (package
(name "r-scran") (name "r-scran")
(version "1.6.9") (version "1.8.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "scran" version)) (uri (bioconductor-uri "scran" version))
(sha256 (sha256
(base32 (base32
"0cs64cnf0xjcgmawr210y99j3gxs6aqgh8081n9827kkqnx2y5dm")))) "0nbn5x75gf9d0p18w7vpkbv30cpdqvp5bz8xvila0h7jla7xdyih"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-beachmat" ,r-beachmat) `(("r-beachmat" ,r-beachmat)
("r-biocgenerics" ,r-biocgenerics) ("r-biocgenerics" ,r-biocgenerics)
("r-biocparallel" ,r-biocparallel) ("r-biocparallel" ,r-biocparallel)
("r-delayedarray" ,r-delayedarray)
("r-delayedmatrixstats" ,r-delayedmatrixstats)
("r-dt" ,r-dt) ("r-dt" ,r-dt)
("r-dynamictreecut" ,r-dynamictreecut) ("r-dynamictreecut" ,r-dynamictreecut)
("r-edger" ,r-edger) ("r-edger" ,r-edger)
@ -10917,8 +10919,7 @@ quality control.")
("r-singlecellexperiment" ,r-singlecellexperiment) ("r-singlecellexperiment" ,r-singlecellexperiment)
("r-statmod" ,r-statmod) ("r-statmod" ,r-statmod)
("r-summarizedexperiment" ,r-summarizedexperiment) ("r-summarizedexperiment" ,r-summarizedexperiment)
("r-viridis" ,r-viridis) ("r-viridis" ,r-viridis)))
("r-zoo" ,r-zoo)))
(home-page "https://bioconductor.org/packages/scran") (home-page "https://bioconductor.org/packages/scran")
(synopsis "Methods for single-cell RNA-Seq data analysis") (synopsis "Methods for single-cell RNA-Seq data analysis")
(description "This package implements a variety of low-level analyses of (description "This package implements a variety of low-level analyses of