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gnu: Add r-genie3. 

* gnu/packages/bioconductor.scm (r-genie3): New variable.
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Ricardo Wurmus 2019-08-30 22:42:29 +02:00
parent 06947252d3
commit d85c0f9842
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@ -5230,3 +5230,24 @@ cis-regulatory topics (cisTopics) from single cell epigenomics data, and
includes functionalities to identify cell states based on the contribution of includes functionalities to identify cell states based on the contribution of
cisTopics and explore the nature and regulatory proteins driving them.") cisTopics and explore the nature and regulatory proteins driving them.")
(license license:gpl3)))) (license license:gpl3))))
(define-public r-genie3
(package
(name "r-genie3")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "GENIE3" version))
(sha256
(base32
"0lvrpw4xn7xyinmn13f65i0vkzfzwdj5y8gsa8vyy8kcn83d28fx"))))
(properties `((upstream-name . "GENIE3")))
(build-system r-build-system)
(propagated-inputs `(("r-reshape2" ,r-reshape2)))
(home-page "https://bioconductor.org/packages/GENIE3")
(synopsis "Gene network inference with ensemble of trees")
(description
"This package implements the GENIE3 algorithm for inferring gene
regulatory networks from expression data.")
(license license:gpl2+)))