gnu: Add r-genie3.
* gnu/packages/bioconductor.scm (r-genie3): New variable.
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@ -5230,3 +5230,24 @@ cis-regulatory topics (cisTopics) from single cell epigenomics data, and
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includes functionalities to identify cell states based on the contribution of
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cisTopics and explore the nature and regulatory proteins driving them.")
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(license license:gpl3))))
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(define-public r-genie3
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(package
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(name "r-genie3")
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(version "1.6.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "GENIE3" version))
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(sha256
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(base32
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"0lvrpw4xn7xyinmn13f65i0vkzfzwdj5y8gsa8vyy8kcn83d28fx"))))
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(properties `((upstream-name . "GENIE3")))
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(build-system r-build-system)
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(propagated-inputs `(("r-reshape2" ,r-reshape2)))
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(home-page "https://bioconductor.org/packages/GENIE3")
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(synopsis "Gene network inference with ensemble of trees")
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(description
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"This package implements the GENIE3 algorithm for inferring gene
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regulatory networks from expression data.")
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(license license:gpl2+)))
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