gnu: scotch: Update to 6.0.5a.
* gnu/packages/patches/pt-scotch-build-parallelism.patch: Delete files. * gnu/packages/patches/scotch-build-parallelism.patch, gnu/packages/patches/scotch-graph-diam-64.patch, gnu/packages/patches/scotch-graph-induce-type-64.patch: New files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/maths.scm (scotch): Update to 6.0.5a. [source](patches): Adjust accordingly.master
Eric Bavier
Eric Bavier
parent
c2e76b7082
commit
d98e9009a9
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@ -1014,7 +1014,6 @@ dist_patch_DATA = \
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%D%/packages/patches/psm-arch.patch \
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%D%/packages/patches/psm-ldflags.patch \
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%D%/packages/patches/psm-repro.patch \
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%D%/packages/patches/pt-scotch-build-parallelism.patch \
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%D%/packages/patches/pulseaudio-fix-mult-test.patch \
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%D%/packages/patches/pulseaudio-longer-test-timeout.patch \
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%D%/packages/patches/pycairo-wscript.patch \
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@ -1086,6 +1085,9 @@ dist_patch_DATA = \
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%D%/packages/patches/rxvt-unicode-escape-sequences.patch \
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%D%/packages/patches/scheme48-tests.patch \
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%D%/packages/patches/scotch-test-threading.patch \
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%D%/packages/patches/scotch-build-parallelism.patch \
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%D%/packages/patches/scotch-graph-diam-64.patch \
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%D%/packages/patches/scotch-graph-induce-type-64.patch \
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%D%/packages/patches/sdl-libx11-1.6.patch \
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%D%/packages/patches/seq24-rename-mutex.patch \
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%D%/packages/patches/shadow-CVE-2018-7169.patch \
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@ -2199,16 +2199,18 @@ implemented in ANSI C, and MPI for communications.")
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(define-public scotch
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(package
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(name "scotch")
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(version "6.0.4")
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(version "6.0.5a")
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(source
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(origin
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(method url-fetch)
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(uri (string-append "https://gforge.inria.fr/frs/download.php/"
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"latestfile/298/scotch_" version ".tar.gz"))
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(sha256
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(base32 "1ir088mvrqggyqdkx9qfynmiaffqbyih5qfl5mga2nrlm1qlsgzm"))
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(base32 "0vsmgjz8qv80di3ljmc7hbdsizxxxwy2b9rgd2fl1mdc6dgbj8av"))
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(patches (search-patches "scotch-test-threading.patch"
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"pt-scotch-build-parallelism.patch"))))
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"scotch-build-parallelism.patch"
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"scotch-graph-induce-type-64.patch"
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"scotch-graph-diam-64.patch"))))
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(build-system gnu-build-system)
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(inputs
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`(("zlib" ,zlib)
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@ -1,13 +0,0 @@
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Building with -j may cause the esmumps_main target to fail with a "no rule for
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dependency libptesmumps.a" error. Fix the dependency name.
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--- scotch_6.0.4/src/esmumps/Makefile 2012-12-01 08:29:29.000000000 -0600
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+++ scotch_6.0.4/src/esmumps/Makefile 2015-06-15 17:29:23.279605734 -0500
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@@ -160,6 +160,6 @@
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order.h \
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symbol.h \
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esmumps.h \
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- lib$(ESMUMPSLIB)$(LIB) \
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+ libesmumps$(LIB) \
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$(libdir)/lib$(SCOTCHLIB)$(LIB) \
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$(libdir)/lib$(SCOTCHLIB)errexit$(LIB)
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@ -0,0 +1,39 @@
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Fixes make with -j, otherwise scotch.h may not be generated by the time make
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tries to compile library_graph_diam.o et al.
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Reported upstream at
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https://gforge.inria.fr/tracker/index.php?func=detail&aid=21651&group_id=248&atid=1081
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diff --git a/src/libscotch/Makefile b/src/libscotch/Makefile
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index 9898894..b0ee14c 100644
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--- a/src/libscotch/Makefile
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+++ b/src/libscotch/Makefile
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@@ -2229,6 +2229,28 @@ library_graph_color_f$(OBJ) : library_graph_color_f.c \
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common.h \
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scotch.h
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+library_graph_diam$(OBJ) : library_graph_diam.c \
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+ module.h \
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+ common.h \
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+ graph.h \
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+ scotch.h
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+
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+library_graph_diam_f$(OBJ) : library_graph_diam.c \
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+ module.h \
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+ common.h \
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+ scotch.h
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+
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+library_graph_induce$(OBJ) : library_graph_diam.c \
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+ module.h \
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+ common.h \
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+ graph.h \
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+ scotch.h
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+
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+library_graph_induce_f$(OBJ) : library_graph_diam.c \
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+ module.h \
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+ common.h \
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+ scotch.h
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+
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library_graph_io_chac$(OBJ) : library_graph_io_chac.c \
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module.h \
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common.h \
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@ -0,0 +1,27 @@
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Fixes test_scotch_graph_diam test with -DINTSIZE64.
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Reported upstream at
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https://gforge.inria.fr/tracker/index.php?func=detail&aid=21650&group_id=248&atid=1081
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--- scotch-6.0.5a/src/libscotch/library.h
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+++ scotch-6.0.5a/src/libscotch/library.h
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@@ -187,6 +187,7 @@ SCOTCH_Num SCOTCH_graphBase (SCOTCH_Graph * const, const SCO
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int SCOTCH_graphCheck (const SCOTCH_Graph * const);
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void SCOTCH_graphSize (const SCOTCH_Graph * const, SCOTCH_Num * const, SCOTCH_Num * const);
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void SCOTCH_graphData (const SCOTCH_Graph * const, SCOTCH_Num * const, SCOTCH_Num * const, SCOTCH_Num ** const, SCOTCH_Num ** const, SCOTCH_Num ** const, SCOTCH_Num ** const, SCOTCH_Num * const, SCOTCH_Num ** const, SCOTCH_Num ** const);
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+SCOTCH_Num SCOTCH_graphDiamPV (SCOTCH_Graph * const);
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void SCOTCH_graphStat (const SCOTCH_Graph * const, SCOTCH_Num * const, SCOTCH_Num * const, SCOTCH_Num * const, double * const, double * const, SCOTCH_Num * const, SCOTCH_Num * const, double * const, double * const, SCOTCH_Num * const, SCOTCH_Num * const, SCOTCH_Num * const, double * const, double * const);
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int SCOTCH_graphCoarsen (const SCOTCH_Graph * const, const SCOTCH_Num, const double, const SCOTCH_Num, SCOTCH_Graph * const, SCOTCH_Num * const);
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int SCOTCH_graphCoarsenMatch (const SCOTCH_Graph * const, SCOTCH_Num * const, const double, const SCOTCH_Num, SCOTCH_Num * const);
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--- scotch-6.0.5a/src/libscotch/library_graph_diam.c
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+++ scotch-6.0.5a/src/libscotch/library_graph_diam.c
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@@ -72,8 +72,7 @@
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SCOTCH_Num
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SCOTCH_graphDiamPV (
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-SCOTCH_Graph * const grafptr,
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-const SCOTCH_Num baseval)
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+SCOTCH_Graph * const grafptr)
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{
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return ((SCOTCH_Num) graphDiamPV ((Graph * const) grafptr));
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}
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@ -0,0 +1,19 @@
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Fixes return type of SCOTCH_graphInduceList and SCOTCH_graphInducePart
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so that the definition matches with -DINTSIZE64.
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Reported upstream at
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https://gforge.inria.fr/tracker/index.php?func=detail&aid=21608&group_id=248&atid=1081
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--- scotch_6.0.5a/src/libscotch/library.h.orig 2018-02-11 10:52:38.000000000 -0600
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+++ scotch_6.0.5a/src/libscotch/library.h 2018-02-23 16:56:41.000000000 -0600
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@@ -199,8 +199,8 @@
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int SCOTCH_graphGeomSaveChac (const SCOTCH_Graph * const, const SCOTCH_Geom * const, FILE * const, FILE * const, const char * const);
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int SCOTCH_graphGeomSaveMmkt (const SCOTCH_Graph * const, const SCOTCH_Geom * const, FILE * const, FILE * const, const char * const);
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int SCOTCH_graphGeomSaveScot (const SCOTCH_Graph * const, const SCOTCH_Geom * const, FILE * const, FILE * const, const char * const);
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-int SCOTCH_graphInduceList (const SCOTCH_Graph * const, const SCOTCH_Num, const SCOTCH_Num * const, SCOTCH_Graph * const);
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-int SCOTCH_graphInducePart (const SCOTCH_Graph * const, const SCOTCH_Num, const SCOTCH_GraphPart2 * const, const SCOTCH_GraphPart2, SCOTCH_Graph * const);
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+SCOTCH_Num SCOTCH_graphInduceList (const SCOTCH_Graph * const, const SCOTCH_Num, const SCOTCH_Num * const, SCOTCH_Graph * const);
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+SCOTCH_Num SCOTCH_graphInducePart (const SCOTCH_Graph * const, const SCOTCH_Num, const SCOTCH_GraphPart2 * const, const SCOTCH_GraphPart2, SCOTCH_Graph * const);
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int SCOTCH_graphMapInit (const SCOTCH_Graph * const, SCOTCH_Mapping * const, const SCOTCH_Arch * const, SCOTCH_Num * const);
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void SCOTCH_graphMapExit (const SCOTCH_Graph * const, SCOTCH_Mapping * const);
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