gnu: Add r-sva.
* gnu/packages/bioinformatics.scm (r-sva): New variable.
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@ -7995,3 +7995,29 @@ immunoprecipitation and target enrichment on small gene panels. Thereby,
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CopywriteR constitutes a widely applicable alternative to available copy
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CopywriteR constitutes a widely applicable alternative to available copy
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number detection tools.")
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number detection tools.")
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(license license:gpl2)))
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(license license:gpl2)))
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(define-public r-sva
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(package
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(name "r-sva")
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(version "3.22.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "sva" version))
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(sha256
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(base32
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"1wc1fjm6dzlsqqagm43y57w8jh8nsh0r0m8z1p6ximcb5gxqh7hn"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-genefilter" ,r-genefilter)))
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(home-page "http://bioconductor.org/packages/sva")
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(synopsis "Surrogate variable analysis")
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(description
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"This package contains functions for removing batch effects and other
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unwanted variation in high-throughput experiment. It also contains functions
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for identifying and building surrogate variables for high-dimensional data
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sets. Surrogate variables are covariates constructed directly from
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high-dimensional data like gene expression/RNA sequencing/methylation/brain
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imaging data that can be used in subsequent analyses to adjust for unknown,
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unmodeled, or latent sources of noise.")
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(license license:artistic2.0)))
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