gnu: fasttree: Update to 2.1.9.
* gnu/packages/bioinformatics.scm (fasttree): Update to 2.1.9.
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@ -1831,7 +1831,7 @@ similarity of community members.")
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(define-public fasttree
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(package
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(name "fasttree")
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(version "2.1.8")
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(version "2.1.9")
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(source (origin
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(method url-fetch)
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(uri (string-append
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@ -1839,7 +1839,7 @@ similarity of community members.")
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version ".c"))
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(sha256
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(base32
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"0dzqc9vr9iiiw21y159xfjl2z90vw0y7r4x6456pcaxiy5hd2wmi"))))
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"0ljvvw8i1als1wbfzvrf15c3ii2vw9db20a259g6pzg34xyyb97k"))))
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(build-system gnu-build-system)
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(arguments
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`(#:tests? #f ; no "check" target
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@ -1848,37 +1848,37 @@ similarity of community members.")
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(delete 'unpack)
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(delete 'configure)
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(replace 'build
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(lambda* (#:key source #:allow-other-keys)
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(and (zero? (system* "gcc"
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"-O3"
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"-finline-functions"
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"-funroll-loops"
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"-Wall"
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"-o"
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"FastTree"
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source
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"-lm"))
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(zero? (system* "gcc"
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"-DOPENMP"
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"-fopenmp"
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"-O3"
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"-finline-functions"
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"-funroll-loops"
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"-Wall"
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"-o"
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"FastTreeMP"
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source
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"-lm")))))
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(lambda* (#:key source #:allow-other-keys)
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(and (zero? (system* "gcc"
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"-O3"
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"-finline-functions"
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"-funroll-loops"
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"-Wall"
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"-o"
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"FastTree"
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source
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"-lm"))
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(zero? (system* "gcc"
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"-DOPENMP"
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"-fopenmp"
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"-O3"
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"-finline-functions"
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"-funroll-loops"
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"-Wall"
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"-o"
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"FastTreeMP"
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source
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"-lm")))))
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(replace 'install
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((bin (string-append (assoc-ref outputs "out")
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"/bin")))
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(mkdir-p bin)
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(copy-file "FastTree"
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(string-append bin "/FastTree"))
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(copy-file "FastTreeMP"
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(string-append bin "/FastTreeMP"))
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#t))))))
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((bin (string-append (assoc-ref outputs "out")
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"/bin")))
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(mkdir-p bin)
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(copy-file "FastTree"
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(string-append bin "/FastTree"))
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(copy-file "FastTreeMP"
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(string-append bin "/FastTreeMP"))
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#t))))))
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(home-page "http://www.microbesonline.org/fasttree")
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(synopsis "Infers approximately-maximum-likelihood phylogenetic trees")
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(description
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