gnu: Add r-ddrtree.

* gnu/packages/cran.scm (r-ddrtree): New variable.
master
Ricardo Wurmus 2019-01-07 16:40:37 +01:00 committed by Ricardo Wurmus
parent 9f33d76c33
commit e3bb076678
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@ -8821,3 +8821,34 @@ package for using sparse matrices. Some of the functions are very general,
while other are highly specific for the special data format used for
@dfn{quantitative language comparison} (QLC).")
(license license:gpl3)))
(define-public r-ddrtree
(package
(name "r-ddrtree")
(version "0.1.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "DDRTree" version))
(sha256
(base32
"16s5fjw7kwlxhrkzdny62sx32fvmg3rxjc3wrh6krd31jh1fqlfk"))))
(properties `((upstream-name . "DDRTree")))
(build-system r-build-system)
(propagated-inputs
`(("r-bh" ,r-bh)
("r-irlba" ,r-irlba)
("r-rcpp" ,r-rcpp)
("r-rcppeigen" ,r-rcppeigen)))
(home-page "https://cran.r-project.org/web/packages/DDRTree")
(synopsis "Learning principal graphs with DDRTree")
(description
"This package provides an implementation of the framework of
@dfn{reversed graph embedding} (RGE) which projects data into a reduced
dimensional space while constructs a principal tree which passes through the
middle of the data simultaneously. DDRTree shows superiority to
alternatives (Wishbone, DPT) for inferring the ordering as well as the
intrinsic structure of single cell genomics data. In general, it could be
used to reconstruct the temporal progression as well as the bifurcation
structure of any data type.")
(license license:asl2.0)))