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Merge branch 'master' into core-updates

This commit is contained in:
Ludovic Courtès 2017-03-09 16:35:41 +01:00
parent 8ea0700d23 9ec2a4d3fe
commit e90e0fad1b
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166 changed files with 5815 additions and 2464 deletions
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5
.gitignore vendored
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@ -44,11 +44,6 @@
/doc/os-config-desktop.texi
/doc/stamp-vti
/doc/version.texi
/emacs/Makefile
/emacs/Makefile.in
/emacs/guix-autoloads.el
/emacs/guix-config.el
/emacs/guix-helper.scm
/etc/guix-daemon.conf
/etc/guix-daemon.service
/etc/guix-publish.conf

25
Makefile.am
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@ -1,7 +1,7 @@
# GNU Guix --- Functional package management for GNU
# Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
# Copyright © 2013 Andreas Enge <andreas@enge.fr>
# Copyright © 2015 Alex Kost <alezost@gmail.com>
# Copyright © 2015, 2017 Alex Kost <alezost@gmail.com>
# Copyright © 2016 Mathieu Lirzin <mthl@gnu.org>
# Copyright © 2016, 2017 Mark H Weaver <mhw@netris.org>
#
@ -196,16 +196,17 @@ endif BUILD_DAEMON_OFFLOAD
# Internal modules with test suite support.
dist_noinst_DATA = guix/tests.scm guix/tests/http.scm
# Linux-Libre configurations.
KCONFIGS = \
gnu/packages/linux-libre-4.10-i686.conf \
gnu/packages/linux-libre-4.10-x86_64.conf \
gnu/packages/linux-libre-4.9-i686.conf \
gnu/packages/linux-libre-4.9-x86_64.conf \
gnu/packages/linux-libre-4.4-i686.conf \
gnu/packages/linux-libre-4.4-x86_64.conf \
gnu/packages/linux-libre-4.1-i686.conf \
gnu/packages/linux-libre-4.1-x86_64.conf
# Auxiliary files for packages.
AUX_FILES = \
gnu/packages/aux-files/emacs/guix-emacs.el \
gnu/packages/aux-files/linux-libre/4.10-i686.conf \
gnu/packages/aux-files/linux-libre/4.10-x86_64.conf \
gnu/packages/aux-files/linux-libre/4.9-i686.conf \
gnu/packages/aux-files/linux-libre/4.9-x86_64.conf \
gnu/packages/aux-files/linux-libre/4.4-i686.conf \
gnu/packages/aux-files/linux-libre/4.4-x86_64.conf \
gnu/packages/aux-files/linux-libre/4.1-i686.conf \
gnu/packages/aux-files/linux-libre/4.1-x86_64.conf
# Templates, examples.
EXAMPLES = \
@ -216,7 +217,7 @@ EXAMPLES = \
GOBJECTS = $(MODULES:%.scm=%.go) guix/config.go $(dist_noinst_DATA:%.scm=%.go)
nobase_dist_guilemodule_DATA = \
$(MODULES) $(KCONFIGS) $(EXAMPLES) \
$(MODULES) $(AUX_FILES) $(EXAMPLES) \
$(MISC_DISTRO_FILES)
nobase_nodist_guilemodule_DATA = $(GOBJECTS) guix/config.scm

7
build-aux/hydra/gnu-system.scm
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@ -259,14 +259,17 @@ valid."
;; prevents known-to-fail cross-builds from i686-linux or armhf-linux to
;; mips64el-linux-gnuabi64.
(and (or (string-prefix? "i686-" system)
(string-prefix? "i586-" system)
(string-prefix? "armhf-" system))
(string-suffix? "64" target)))
(string-contains target "64"))) ;x86_64, mips64el, aarch64, etc.
(define (same? target)
;; Return true if SYSTEM and TARGET are the same thing. This is so we
;; don't try to cross-compile to 'mips64el-linux-gnu' from
;; 'mips64el-linux'.
(string-contains target system))
(or (string-contains target system)
(and (string-prefix? "armhf" system) ;armhf-linux
(string-prefix? "arm" target)))) ;arm-linux-gnueabihf
(define (pointless? target)
;; Return #t if it makes no sense to cross-build to TARGET from SYSTEM.

15
build-aux/pre-inst-env.in
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@ -1,7 +1,7 @@
#!/bin/sh
# GNU Guix --- Functional package management for GNU
# Copyright © 2012, 2013, 2014, 2015 Ludovic Courtès <ludo@gnu.org>
# Copyright © 2012, 2013, 2014, 2015, 2017 Ludovic Courtès <ludo@gnu.org>
#
# This file is part of GNU Guix.
#
@ -45,11 +45,18 @@ export PATH
NIX_ROOT_FINDER="$abs_top_builddir/nix/scripts/list-runtime-roots"
NIX_SUBSTITUTERS="$abs_top_builddir/nix/scripts/substitute"
NIX_BUILD_HOOK="$abs_top_builddir/nix/scripts/offload"
NIX_LIBEXEC_DIR="@abs_top_builddir@/nix/scripts" # for 'guix-authenticate'
export NIX_ROOT_FINDER NIX_SUBSTITUTERS \
NIX_BUILD_HOOK NIX_LIBEXEC_DIR
export NIX_ROOT_FINDER NIX_SUBSTITUTERS NIX_LIBEXEC_DIR
NIX_BUILD_HOOK="$abs_top_builddir/nix/scripts/offload"
if [ -x "$NIX_BUILD_HOOK" ]
then
export NIX_BUILD_HOOK
else
# No offloading support.
unset NIX_BUILD_HOOK
fi
# The 'guix-register' program.
GUIX_REGISTER="$abs_top_builddir/guix-register"

188
doc/guix.texi
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@ -443,8 +443,15 @@ Run the daemon, and set it to automatically start on boot.
If your host distro uses the systemd init system, this can be achieved
with these commands:
@c Versions of systemd that supported symlinked service files are not
@c yet widely deployed, so we should suggest that users copy the service
@c files into place.
@c
@c See this thread for more information:
@c http://lists.gnu.org/archive/html/guix-devel/2017-01/msg01199.html
@example
# ln -s ~root/.guix-profile/lib/systemd/system/guix-daemon.service \
# cp ~root/.guix-profile/lib/systemd/system/guix-daemon.service \
/etc/systemd/system/
# systemctl start guix-daemon && systemctl enable guix-daemon
@end example
@ -452,8 +459,8 @@ with these commands:
If your host distro uses the Upstart init system:
@example
# ln -s ~root/.guix-profile/lib/upstart/system/guix-daemon.conf /etc/init/
# initctl reload-configuration
# cp ~root/.guix-profile/lib/upstart/system/guix-daemon.conf /etc/init/
# start guix-daemon
@end example
@ -8396,7 +8403,7 @@ other things.
@deftp {Data Type} mingetty-configuration
This is the data type representing the configuration of Mingetty, which
implements console log-in.
provides the default implementation of virtual console log-in.
@table @asis
@ -8423,6 +8430,172 @@ The Mingetty package to use.
@end table
@end deftp
@deffn {Scheme Procedure} agetty-service @var{config}
Return a service to run agetty according to @var{config}, an
@code{<agetty-configuration>} object, which specifies the tty to run,
among other things.
@end deffn
@deftp {Data Type} agetty-configuration
This is the data type representing the configuration of agetty, which
implements virtual and serial console log-in. See the @code{agetty(8)}
man page for more information.
@table @asis
@item @code{tty}
The name of the console this agetty runs on, as a string---e.g.,
@code{"ttyS0"}. This argument is mandatory.
@item @code{baud-rate} (default: @code{#f})
A string containing a comma-separated list of one or more baud rates, in
descending order.
@item @code{term} (default: @code{#f})
A string containing the value used for the @code{TERM} environment
variable.
@item @code{eight-bits?} (default: @code{#f})
When @code{#t}, the tty is assumed to be 8-bit clean, and parity detection is
disabled.
@item @code{auto-login} (default: @code{#f})
When passed a login name, as a string, the specified user will be logged
in automatically without prompting for their login name or password.
@item @code{no-reset?} (default: @code{#f})
When @code{#t}, don't reset terminal cflags (control modes).
@item @code{host} (default: @code{#f})
This accepts a string containing the "login_host", which will be written
into the @file{/var/run/utmpx} file.
@item @code{remote?} (default: @code{#f})
When set to @code{#t} in conjunction with @var{host}, this will add an
@code{-r} fakehost option to the command line of the login program
specified in @var{login-program}.
@item @code{flow-control?} (default: @code{#f})
When set to @code{#t}, enable hardware (RTS/CTS) flow control.
@item @code{no-issue?} (default: @code{#f})
When set to @code{#t}, the contents of the @file{/etc/issue} file will
not be displayed before presenting the login prompt.
@item @code{init-string} (default: @code{#f})
This accepts a string that will be sent to the tty or modem before
sending anything else. It can be used to initialize a modem.
@item @code{no-clear?} (default: @code{#f})
When set to @code{#t}, agetty will not clear the screen before showing
the login prompt.
@item @code{login-program} (default: (file-append shadow "/bin/login"))
This must be either a gexp denoting the name of a log-in program, or
unset, in which case the default value is the @command{login} from the
Shadow tool suite.
@item @code{local-line} (default: @code{#f})
Control the CLOCAL line flag. This accepts one of three symbols as
arguments, @code{'auto}, @code{'always}, or @code{'never}. If @code{#f},
the default value chosen by agetty is @code{'auto}.
@item @code{extract-baud?} (default: @code{#f})
When set to @code{#t}, instruct agetty to try to extract the baud rate
from the status messages produced by certain types of modems.
@item @code{skip-login?} (default: @code{#f})
When set to @code{#t}, do not prompt the user for a login name. This
can be used with @var{login-program} field to use non-standard login
systems.
@item @code{no-newline?} (default: @code{#f})
When set to @code{#t}, do not print a newline before printing the
@file{/etc/issue} file.
@c Is this dangerous only when used with login-program, or always?
@item @code{login-options} (default: @code{#f})
This option accepts a string containing options that are passed to the
login program. When used with the @var{login-program}, be aware that a
malicious user could try to enter a login name containing embedded
options that could be parsed by the login program.
@item @code{login-pause} (default: @code{#f})
When set to @code{#t}, wait for any key before showing the login prompt.
This can be used in conjunction with @var{auto-login} to save memory by
lazily spawning shells.
@item @code{chroot} (default: @code{#f})
Change root to the specified directory. This option accepts a directory
path as a string.
@item @code{hangup?} (default: @code{#f})
Use the Linux system call @code{vhangup} to do a virtual hangup of the
specified terminal.
@item @code{keep-baud?} (default: @code{#f})
When set to @code{#t}, try to keep the existing baud rate. The baud
rates from @var{baud-rate} are used when agetty receives a @key{BREAK}
character.
@item @code{timeout} (default: @code{#f})
When set to an integer value, terminate if no user name could be read
within @var{timeout} seconds.
@item @code{detect-case?} (default: @code{#f})
When set to @code{#t}, turn on support for detecting an uppercase-only
terminal. This setting will detect a login name containing only
uppercase letters as indicating an uppercase-only terminal and turn on
some upper-to-lower case conversions. Note that this will not support
Unicode characters.
@item @code{wait-cr?} (default: @code{#f})
When set to @code{#t}, wait for the user or modem to send a
carriage-return or linefeed character before displaying
@file{/etc/issue} or login prompt. This is typically used with the
@var{init-string} option.
@item @code{no-hints?} (default: @code{#f})
When set to @code{#t}, do not print hints about Num, Caps, and Scroll
locks.
@item @code{no-hostname?} (default: @code{#f})
By default, the hostname is printed. When this option is set to
@code{#t}, no hostname will be shown at all.
@item @code{long-hostname?} (default: @code{#f})
By default, the hostname is only printed until the first dot. When this
option is set to @code{#t}, the fully qualified hostname by
@code{gethostname} or @code{getaddrinfo} is shown.
@item @code{erase-characters} (default: @code{#f})
This option accepts a string of additional characters that should be
interpreted as backspace when the user types their login name.
@item @code{kill-characters} (default: @code{#f})
This option accepts a string that should be interpreted to mean "ignore
all previous characters" (also called a "kill" character) when the types
their login name.
@item @code{chdir} (default: @code{#f})
This option accepts, as a string, a directory path that will be changed
to before login.
@item @code{delay} (default: @code{#f})
This options accepts, as an integer, the number of seconds to sleep
before opening the tty and displaying the login prompt.
@item @code{nice} (default: @code{#f})
This option accepts, as an integer, the nice value with which to run the
@command{login} program.
@item @code{extra-options} (default: @code{'()})
This option provides an "escape hatch" for the user to provide arbitrary
command-line arguments to @command{agetty} as a list of strings.
@end table
@end deftp
@deffn {Scheme Procedure} kmscon-service-type @var{config}
Return a service to run @uref{https://www.freedesktop.org/wiki/Software/kmscon,kmscon}
according to @var{config}, a @code{<kmscon-configuration>} object, which
@ -8431,7 +8604,7 @@ specifies the tty to run, among other things.
@deftp {Data Type} kmscon-configuration
This is the data type representing the configuration of Kmscon, which
implements console log-in.
implements virtual console log-in.
@table @asis
@ -8616,6 +8789,13 @@ are written.
@item @code{lsof} (default: @var{lsof})
The lsof package to use.
@item @code{http-proxy} (default: @code{#f})
The HTTP proxy used for downloading fixed-output derivations and
substitutes.
@item @code{tmpdir} (default: @code{#f})
A directory path where the @command{guix-daemon} will perform builds.
@end table
@end deftp

2
etc/guix-daemon.conf.in
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@ -9,4 +9,4 @@ stop on runlevel [016]
task
exec @bindir@/guix-daemon --build-users-group=guixbuild
exec @localstatedir@/guix/profiles/per-user/root/guix-profile/bin/guix-daemon --build-users-group=guixbuild

2
etc/guix-daemon.service.in
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@ -6,7 +6,7 @@
Description=Build daemon for GNU Guix
[Service]
ExecStart=@bindir@/guix-daemon --build-users-group=guixbuild
ExecStart=@localstatedir@/guix/profiles/per-user/root/guix-profile/bin/guix-daemon --build-users-group=guixbuild
Environment=GUIX_LOCPATH=/root/.guix-profile/lib/locale
RemainAfterExit=yes
StandardOutput=syslog

2
etc/guix-publish.conf.in
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@ -9,4 +9,4 @@ stop on runlevel [016]
task
exec @bindir@/guix publish --user=nobody --port=8181
exec @localstatedir@/guix/profiles/per-user/root/guix-profile/bin/guix publish --user=nobody --port=8181

2
etc/guix-publish.service.in
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@ -6,7 +6,7 @@
Description=Publish the GNU Guix store
[Service]
ExecStart=@bindir@/guix publish --user=nobody --port=8181
ExecStart=@localstatedir@/guix/profiles/per-user/root/guix-profile/bin/guix publish --user=nobody --port=8181
Environment=GUIX_LOCPATH=/root/.guix-profile/lib/locale
RemainAfterExit=yes
StandardOutput=syslog

66
gnu/build/file-systems.scm
View File

@ -106,15 +106,17 @@ takes a bytevector and returns #t when it's a valid superblock."
(bytevector-copy! bv start result 0 size)
result))
(define (null-terminated-latin1->string bv)
"Return the volume name of SBLOCK as a string of at most 256 characters, or
#f if SBLOCK has no volume name."
;; This is a Latin-1, nul-terminated string.
(let ((bytes (take-while (negate zero?) (bytevector->u8-list bv))))
(define (latin1->string bv terminator)
"Return a string of BV, a latin1 bytevector, or #f. TERMINATOR is a predicate
that takes a number and returns #t when a termination character is found."
(let ((bytes (take-while (negate terminator) (bytevector->u8-list bv))))
(if (null? bytes)
#f
(list->string (map integer->char bytes)))))
(define null-terminated-latin1->string
(cut latin1->string <> zero?))
;;;
;;; Ext2 file systems.
@ -192,6 +194,51 @@ if DEVICE does not contain a btrfs file system."
(0 'pass)
(_ 'fatal-error)))
;;;
;;; FAT32 file systems.
;;;
;; <http://www.ecma-international.org/publications/files/ECMA-ST/Ecma-107.pdf>.
(define-syntax %fat32-endianness
;; Endianness of fat file systems.
(identifier-syntax (endianness little)))
(define (fat32-superblock? sblock)
"Return #t when SBLOCK is a fat32 superblock."
(bytevector=? (sub-bytevector sblock 82 8)
(string->utf8 "FAT32 ")))
(define (read-fat32-superblock device)
"Return the raw contents of DEVICE's fat32 superblock as a bytevector, or
#f if DEVICE does not contain a fat32 file system."
(read-superblock device 0 90 fat32-superblock?))
(define (fat32-superblock-uuid sblock)
"Return the Volume ID of a fat superblock SBLOCK as a 4-byte bytevector."
(sub-bytevector sblock 67 4))
(define (fat32-uuid->string uuid)
"Convert fat32 UUID, a 4-byte bytevector, to its string representation."
(let ((high (bytevector-uint-ref uuid 0 %fat32-endianness 2))
(low (bytevector-uint-ref uuid 2 %fat32-endianness 2)))
(format #f "~:@(~x-~x~)" low high)))
(define (fat32-superblock-volume-name sblock)
"Return the volume name of SBLOCK as a string of at most 11 characters, or
#f if SBLOCK has no volume name. The volume name is a latin1 string.
Trailing spaces are trimmed."
(string-trim-right (latin1->string (sub-bytevector sblock 71 11) (lambda (c) #f)) #\space))
(define (check-fat32-file-system device)
"Return the health of a fat file system on DEVICE."
(match (status:exit-val
(system* "fsck.vfat" "-v" "-a" device))
(0 'pass)
(1 'errors-corrected)
(_ 'fatal-error)))
;;;
;;; LUKS encrypted devices.
@ -307,13 +354,17 @@ partition field reader that returned a value."
(list (partition-field-reader read-ext2-superblock
ext2-superblock-volume-name)
(partition-field-reader read-btrfs-superblock
btrfs-superblock-volume-name)))
btrfs-superblock-volume-name)
(partition-field-reader read-fat32-superblock
fat32-superblock-volume-name)))
(define %partition-uuid-readers
(list (partition-field-reader read-ext2-superblock
ext2-superblock-uuid)
(partition-field-reader read-btrfs-superblock
btrfs-superblock-uuid)))
btrfs-superblock-uuid)
(partition-field-reader read-fat32-superblock
fat32-superblock-uuid)))
(define read-partition-label
(cut read-partition-field <> %partition-label-readers))
@ -481,6 +532,7 @@ the following:
(cond
((string-prefix? "ext" type) check-ext2-file-system)
((string-prefix? "btrfs" type) check-btrfs-file-system)
((string-suffix? "fat" type) check-fat32-file-system)
(else #f)))
(if check-procedure

24
gnu/local.mk
View File

@ -1,6 +1,6 @@
# GNU Guix --- Functional package management for GNU
# Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
# Copyright © 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
# Copyright © 2013, 2014, 2015, 2016, 2017 Andreas Enge <andreas@enge.fr>
# Copyright © 2016 Mathieu Lirzin <mthl@gnu.org>
# Copyright © 2013, 2014, 2015, 2016 Mark H Weaver <mhw@netris.org>
# Copyright © 2016 Chris Marusich <cmmarusich@gmail.com>
@ -483,7 +483,6 @@ dist_patch_DATA = \
%D%/packages/patches/agg-am_c_prototype.patch \
%D%/packages/patches/antiword-CVE-2014-8123.patch \
%D%/packages/patches/apr-skip-getservbyname-test.patch \
%D%/packages/patches/arb-ldconfig.patch \
%D%/packages/patches/artanis-fix-Makefile.in.patch \
%D%/packages/patches/ath9k-htc-firmware-binutils.patch \
%D%/packages/patches/ath9k-htc-firmware-gcc.patch \
@ -603,6 +602,7 @@ dist_patch_DATA = \
%D%/packages/patches/gmp-faulty-test.patch \
%D%/packages/patches/gnome-tweak-tool-search-paths.patch \
%D%/packages/patches/gnucash-price-quotes-perl.patch \
%D%/packages/patches/gnupg-2.1-fix-Y2038-test-failure.patch \
%D%/packages/patches/gobject-introspection-absolute-shlib-path.patch \
%D%/packages/patches/gobject-introspection-cc.patch \
%D%/packages/patches/gobject-introspection-girepository.patch \
@ -611,7 +611,6 @@ dist_patch_DATA = \
%D%/packages/patches/grub-gets-undeclared.patch \
%D%/packages/patches/grub-freetype.patch \
%D%/packages/patches/gsl-test-i686.patch \
%D%/packages/patches/gst-plugins-base-fix-test-on-32bit.patch \
%D%/packages/patches/guile-1.8-cpp-4.5.patch \
%D%/packages/patches/guile-arm-fixes.patch \
%D%/packages/patches/guile-default-utf8.patch \
@ -655,6 +654,7 @@ dist_patch_DATA = \
%D%/packages/patches/jq-CVE-2015-8863.patch \
%D%/packages/patches/kdbusaddons-kinit-file-name.patch \
%D%/packages/patches/khmer-use-libraries.patch \
%D%/packages/patches/kio-CVE-2017-6410.patch \
%D%/packages/patches/kmod-module-directory.patch \
%D%/packages/patches/kobodeluxe-paths.patch \
%D%/packages/patches/kobodeluxe-enemies-pipe-decl.patch \
@ -691,7 +691,6 @@ dist_patch_DATA = \
%D%/packages/patches/libmad-armv7-thumb-pt2.patch \
%D%/packages/patches/libmad-frame-length.patch \
%D%/packages/patches/libmad-mips-newgcc.patch \
%D%/packages/patches/libssh-0.6.5-CVE-2016-0739.patch \
%D%/packages/patches/libssh2-fix-build-failure-with-gcrypt.patch \
%D%/packages/patches/libtar-CVE-2013-4420.patch \
%D%/packages/patches/libtheora-config-guess.patch \
@ -749,7 +748,6 @@ dist_patch_DATA = \
%D%/packages/patches/make-impure-dirs.patch \
%D%/packages/patches/mars-install.patch \
%D%/packages/patches/mars-sfml-2.3.patch \
%D%/packages/patches/matplotlib-setupext-tk.patch \
%D%/packages/patches/maxima-defsystem-mkdir.patch \
%D%/packages/patches/mcron-install.patch \
%D%/packages/patches/mcrypt-CVE-2012-4409.patch \
@ -767,6 +765,8 @@ dist_patch_DATA = \
%D%/packages/patches/mupdf-build-with-openjpeg-2.1.patch \
%D%/packages/patches/mupdf-mujs-CVE-2016-10132.patch \
%D%/packages/patches/mupdf-mujs-CVE-2016-10133.patch \
%D%/packages/patches/mupdf-CVE-2017-5896.patch \
%D%/packages/patches/mupdf-CVE-2017-5991.patch \
%D%/packages/patches/mupen64plus-ui-console-notice.patch \
%D%/packages/patches/musl-CVE-2016-8859.patch \
%D%/packages/patches/mutt-store-references.patch \
@ -811,7 +811,6 @@ dist_patch_DATA = \
%D%/packages/patches/patchelf-rework-for-arm.patch \
%D%/packages/patches/patchutils-xfail-gendiff-tests.patch \
%D%/packages/patches/patch-hurd-path-max.patch \
%D%/packages/patches/pcre2-CVE-2016-3191.patch \
%D%/packages/patches/perl-autosplit-default-time.patch \
%D%/packages/patches/perl-deterministic-ordering.patch \
%D%/packages/patches/perl-finance-quote-unuse-mozilla-ca.patch \
@ -856,17 +855,24 @@ dist_patch_DATA = \
%D%/packages/patches/python-3-search-paths.patch \
%D%/packages/patches/python-3.4-fix-tests.patch \
%D%/packages/patches/python-3.5-fix-tests.patch \
%D%/packages/patches/python-dendropy-fix-tests.patch \
%D%/packages/patches/python-file-double-encoding-bug.patch \
%D%/packages/patches/python-fix-tests.patch \
%D%/packages/patches/python-parse-too-many-fields.patch \
%D%/packages/patches/python2-rdflib-drop-sparqlwrapper.patch \
%D%/packages/patches/python-statsmodels-fix-tests.patch \
%D%/packages/patches/python-configobj-setuptools.patch \
%D%/packages/patches/python-fake-factory-fix-build-32bit.patch \
%D%/packages/patches/python-faker-fix-build-32bit.patch \
%D%/packages/patches/python-pandas-skip-failing-tests.patch \
%D%/packages/patches/python-paste-remove-website-test.patch \
%D%/packages/patches/python-paste-remove-timing-test.patch \
%D%/packages/patches/python-pygit2-disable-network-tests.patch \
%D%/packages/patches/python-pyopenssl-skip-network-test.patch \
%D%/packages/patches/python-pycrypto-CVE-2013-7459.patch \
%D%/packages/patches/python2-pygobject-2-gi-info-type-error-domain.patch \
%D%/packages/patches/python-pygpgme-fix-pinentry-tests.patch \
%D%/packages/patches/python2-subprocess32-disable-input-test.patch \
%D%/packages/patches/qemu-CVE-2016-10155.patch \
%D%/packages/patches/qemu-CVE-2017-2615.patch \
%D%/packages/patches/qemu-CVE-2017-5525.patch \
@ -894,12 +900,12 @@ dist_patch_DATA = \
%D%/packages/patches/ruby-tzinfo-data-ignore-broken-test.patch\
%D%/packages/patches/scheme48-tests.patch \
%D%/packages/patches/scotch-test-threading.patch \
%D%/packages/patches/screen-CVE-2017-5618.patch \
%D%/packages/patches/sdl-libx11-1.6.patch \
%D%/packages/patches/seq24-rename-mutex.patch \
%D%/packages/patches/serf-comment-style-fix.patch \
%D%/packages/patches/serf-deflate-buckets-test-fix.patch \
%D%/packages/patches/shadow-4.4-su-snprintf-fix.patch \
%D%/packages/patches/shadow-CVE-2017-2616.patch \
%D%/packages/patches/slim-session.patch \
%D%/packages/patches/slim-config.patch \
%D%/packages/patches/slim-sigusr1.patch \
@ -925,6 +931,7 @@ dist_patch_DATA = \
%D%/packages/patches/tcsh-fix-autotest.patch \
%D%/packages/patches/tcsh-fix-out-of-bounds-read.patch \
%D%/packages/patches/teensy-loader-cli-help.patch \
%D%/packages/patches/texlive-texmf-CVE-2016-10243.patch \
%D%/packages/patches/texi2html-document-encoding.patch \
%D%/packages/patches/texi2html-i18n.patch \
%D%/packages/patches/tidy-CVE-2015-5522+5523.patch \
@ -951,9 +958,9 @@ dist_patch_DATA = \
%D%/packages/patches/unzip-overflow-long-fsize.patch \
%D%/packages/patches/unzip-remove-build-date.patch \
%D%/packages/patches/util-linux-tests.patch \
%D%/packages/patches/util-linux-CVE-2017-2616.patch \
%D%/packages/patches/upower-builddir.patch \
%D%/packages/patches/valgrind-enable-arm.patch \
%D%/packages/patches/vdirsyncer-test-suite-slow-machines.patch \
%D%/packages/patches/vim-CVE-2017-5953.patch \
%D%/packages/patches/vorbis-tools-CVE-2014-9638+CVE-2014-9639.patch \
%D%/packages/patches/vorbis-tools-CVE-2014-9640.patch \
@ -973,6 +980,7 @@ dist_patch_DATA = \
%D%/packages/patches/wordnet-CVE-2008-3908-pt2.patch \
%D%/packages/patches/xcb-proto-python3-print.patch \
%D%/packages/patches/xcb-proto-python3-whitespace.patch \
%D%/packages/patches/wxwidgets-fix-windowGTK.patch \
%D%/packages/patches/xdotool-fix-makefile.patch \
%D%/packages/patches/xf86-input-wacom-xorg-abi-25.patch \
%D%/packages/patches/xf86-video-ark-remove-mibstore.patch \

28
gnu/packages.scm
View File

@ -2,7 +2,7 @@
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2016 Alex Kost <alezost@gmail.com>
;;; Copyright © 2016, 2017 Alex Kost <alezost@gmail.com>
;;; Copyright © 2016 Mathieu Lirzin <mthl@gnu.org>
;;;
;;; This file is part of GNU Guix.
@ -40,8 +40,10 @@
#:use-module (srfi srfi-39)
#:export (search-patch
search-patches
search-auxiliary-file
search-bootstrap-binary
%patch-path
%auxiliary-files-path
%bootstrap-binaries-path
%package-module-path
@ -62,17 +64,27 @@
;;;
;;; Code:
;; By default, we store patches and bootstrap binaries alongside Guile
;; modules. This is so that these extra files can be found without
;; requiring a special setup, such as a specific installation directory
;; and an extra environment variable. One advantage of this setup is
;; that everything just works in an auto-compilation setting.
;; By default, we store patches, auxiliary files and bootstrap binaries
;; alongside Guile modules. This is so that these extra files can be
;; found without requiring a special setup, such as a specific
;; installation directory and an extra environment variable. One
;; advantage of this setup is that everything just works in an
;; auto-compilation setting.
(define %bootstrap-binaries-path
(make-parameter
(map (cut string-append <> "/gnu/packages/bootstrap")
%load-path)))
(define %auxiliary-files-path
(make-parameter
(map (cut string-append <> "/gnu/packages/aux-files")
%load-path)))
(define (search-auxiliary-file file-name)
"Search the auxiliary FILE-NAME. Return #f if not found."
(search-path (%auxiliary-files-path) file-name))
(define (search-patch file-name)
"Search the patch FILE-NAME. Raise an error if not found."
(or (search-path (%patch-path) file-name)
@ -299,8 +311,8 @@ return its return value."
((pkg . pkg*)
(unless (null? pkg*)
(warning (_ "ambiguous package specification `~a'~%") spec)
(warning (_ "choosing ~a from ~a~%")
(package-full-name pkg)
(warning (_ "choosing ~a@~a from ~a~%")
(package-name pkg) (package-version pkg)
(location->string (package-location pkg))))
(when fallback?
(warning (_ "deprecated NAME-VERSION syntax; \

39
gnu/packages/admin.scm
View File

@ -256,13 +256,11 @@ re-executing them as necessary.")
(base32
"05n65k4ixl85dc6rxc51b1b732gnmm8xnqi424dy9f1nz7ppb3xy"))))
(build-system gnu-build-system)
(arguments `(#:configure-flags '("--localstatedir=/var")
;; FIXME: `tftp.sh' relies on `netstat' from utils-linux,
;; which is currently missing.
#:tests? #f))
(arguments
'(#:configure-flags '("--localstatedir=/var")))
(inputs `(("ncurses" ,ncurses)
("readline" ,readline))) ; for 'ftp'
("readline" ,readline))) ;for 'ftp'
(native-inputs `(("netstat" ,net-tools))) ;for tests
(home-page "http://www.gnu.org/software/inetutils/")
(synopsis "Basic networking utilities")
(description
@ -279,7 +277,8 @@ client and server, a telnet client and server, and an rsh client and server.")
(uri (string-append
"https://github.com/shadow-maint/shadow/releases/"
"download/" version "/shadow-" version ".tar.xz"))
(patches (search-patches "shadow-4.4-su-snprintf-fix.patch"))
(patches (search-patches "shadow-4.4-su-snprintf-fix.patch"
"shadow-CVE-2017-2616.patch"))
(sha256
(base32
"0g7hf55ar2pafg5g3ldx0fwzjk36wf4xb21p4ndanbjm3c2a9ab1"))))
@ -1701,15 +1700,29 @@ throughput (in the same interval).")
(base32
"04q2cn8c83f6z6wn1scla1ilrpi5ssjc64987hvmwfvwvb82bvkp"))))
(build-system python-build-system)
(inputs
(arguments
'(#:tests? #f))
;; FIXME: 10 test failures. Some require newer pytest (> 2.9.2).
;; Others need more work. Un-comment the below to run the tests.
;; #:phases
;; (modify-phases %standard-phases
;; (replace 'check
;; (lambda _
;; ;; Some tests need write access to $HOME.
;; (setenv "HOME" "/tmp")
;; (zero? (system* "py.test" "-v")))))))
(propagated-inputs
`(("python-colorama" ,python-colorama)
("python-decorator" ,python-decorator)
("python-psutil" ,python-psutil)
("python-six" ,python-six)))
(native-inputs
`(("python-mock" ,python-mock)
("python-pytest" ,python-pytest)
("python-pytest-mock" ,python-pytest-mock)
;; Requires setuptools >= 17.1 due to some features used, while our
;; python currently only includes 12.0. TODO: Remove this input.
`(("python-setuptools" ,python-setuptools)))
("python-setuptools" ,python-setuptools)))
(home-page "https://github.com/nvbn/thefuck")
(synopsis "Correct mistyped console command")
(description
@ -1720,13 +1733,13 @@ a new command using the matched rule, and runs it.")
(define-public di
(package
(name "di")
(version "4.42")
(version "4.43")
(source
(origin
(method url-fetch)
(uri (string-append "https://gentoo.com/di/di-" version ".tar.gz"))
(sha256
(base32 "1i6m9zdnidn8268q1lz9fd8payk7s4pgwh5zlam9rr4dy6h6a67n"))))
(base32 "1q25jy51qfzsym9b2w0cqzscq2j492gn60dy6gbp88m8nwm4sdy8"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; Obscure test failures.
@ -1751,14 +1764,14 @@ highly portable. Great for heterogenous networks.")
(define-public cbatticon
(package
(name "cbatticon")
(version "1.6.4")
(version "1.6.5")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/valr/"
name "/archive/" version ".tar.gz"))
(sha256
(base32
"023fvsa4q7rl98rqgwrb1shyzaybdkkbyz5sywd0s5p7ixkksxqx"))
"0xzz1faqgm57bwlkw6sjdfbckf5hck81879zbfk18p7xn9vhvixv"))
(file-name (string-append name "-" version ".tar.gz"))))
(build-system gnu-build-system)
(arguments

19
gnu/packages/algebra.scm
View File

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2013, 2015, 2017 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
@ -128,7 +128,7 @@ solve the shortest vector problem.")
(define-public pari-gp
(package
(name "pari-gp")
(version "2.7.6")
(version "2.9.1")
(source (origin
(method url-fetch)
(uri (string-append
@ -136,7 +136,7 @@ solve the shortest vector problem.")
version ".tar.gz"))
(sha256
(base32
"04dqi697czd8mmw8aiwzrkgbvkjassqagg6lfy3lkf1k5qi9g9rr"))))
"0rq7wz9df1xs4acdzzb5dapx8vs6m5py39n2wynw2qv4d2b0ylfw"))))
(build-system gnu-build-system)
(native-inputs `(("texlive" ,texlive-minimal)))
(inputs `(("gmp" ,gmp)
@ -168,7 +168,7 @@ PARI is also available as a C library to allow for faster computations.")
(define-public gp2c
(package
(name "gp2c")
(version "0.0.9pl5")
(version "0.0.10")
(source (origin
(method url-fetch)
(uri (string-append
@ -176,7 +176,7 @@ PARI is also available as a C library to allow for faster computations.")
version ".tar.gz"))
(sha256
(base32
"1q003mkagc5ib6lqb2xfay7j4ffkwv7xlnznp6wdrq2sbqq4vyak"))))
"1xhpz5p81iw261ay1kip283ggr0ir8ydz8qx3v24z8jfms1r3y70"))))
(build-system gnu-build-system)
(native-inputs `(("perl" ,perl)))
(inputs `(("pari-gp" ,pari-gp)))
@ -202,7 +202,7 @@ GP2C, the GP to C compiler, translates GP scripts to PARI programs.")
(define-public giac-xcas
(package
(name "giac-xcas")
(version "1.2.3-19")
(version "1.2.3-25")
(source (origin
(method url-fetch)
;; "~parisse/giac" is not used because the maintainer regularly
@ -214,7 +214,7 @@ GP2C, the GP to C compiler, translates GP scripts to PARI programs.")
"source/giac_" version ".tar.gz"))
(sha256
(base32
"0asynsj0xcfdjn0vkyxdgdy3hfpr6gc9f92xxa1rmn7clbqmlk1y"))))
"0d6a42p8111raf7k16yvjajnpj22abiqndy3yzkrb4b8l071r24d"))))
(build-system gnu-build-system)
(arguments
`(#:phases
@ -311,7 +311,7 @@ fast arithmetic.")
(define-public arb
(package
(name "arb")
(version "2.8.1")
(version "2.10.0")
(source (origin
(method url-fetch)
(uri (string-append
@ -320,8 +320,7 @@ fast arithmetic.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"04hhcpshfkcq9fr4hixbhpps50yf9drk62xgkvlcaj5kb4nyrx7l"))
(patches (search-patches "arb-ldconfig.patch"))))
"0jwcv9ssvi8axb1y7m2h4ykgyl015cl6g28gfl92l4dgnag585ak"))))
(build-system gnu-build-system)
(propagated-inputs
`(("flint" ,flint))) ; flint.h is included by arf.h

46
gnu/packages/astronomy.scm
View File

@ -21,7 +21,13 @@
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix download)
#:use-module (gnu packages image)
#:use-module (gnu packages compression)
#:use-module (gnu packages gettext)
#:use-module (gnu packages perl)
#:use-module (gnu packages gl)
#:use-module (gnu packages qt)
#:use-module (gnu packages maths)
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu))
(define-public cfitsio
@ -107,3 +113,43 @@ systems in a FITS image header.")
(description "The GNU Astronomy Utilities (Gnuastro) is a suite of
programs for the manipulation and analysis of astronomical data.")
(license license:gpl3+)))
(define-public stellarium
(package
(name "stellarium")
(version "0.15.1")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/stellarium/"
"Stellarium-sources/"
version "/stellarium-" version ".tar.gz"))
(sha256
(base32
"04avigz8i8mi2x6x71bqr9np85n1p9qnvbj2hxr947f1jv22zr8g"))))
(build-system cmake-build-system)
(inputs
`(("qtbase" ,qtbase)
("qtmultimedia" ,qtmultimedia)
("qtscript" ,qtscript)
("qtserialport" ,qtserialport)
("zlib" ,zlib)))
(native-inputs
`(("gettext" ,gettext-minimal) ; xgettext is used at compile time
("perl" ,perl) ; For pod2man
("qtbase" ,qtbase) ; Qt MOC is needed at compile time
("qttools" ,qttools)))
(arguments
`(#:test-target "tests"
#:phases (modify-phases %standard-phases
(add-before 'check 'set-offscreen-display
(lambda _
(setenv "QT_QPA_PLATFORM" "offscreen")
(setenv "HOME" "/tmp")
#t)))))
(home-page "http://www.stellarium.org/")
(synopsis "3D sky viewer")
(description "Stellarium is a planetarium. It shows a realistic sky in
3D, just like what you see with the naked eye, binoculars, or a telescope. It
can be used to control telescopes over a serial port for tracking celestial
objects.")
(license license:gpl2+)))

14
gnu/packages/audio.scm
View File

@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2016 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015 Alex Kost <alezost@gmail.com>
@ -186,7 +186,7 @@ streams from live audio.")
(define-public ardour
(package
(name "ardour")
(version "5.6")
(version "5.8")
(source (origin
(method git-fetch)
(uri (git-reference
@ -203,18 +203,20 @@ streams from live audio.")
namespace ARDOUR { const char* revision = \"" version "\" ; }")))))
(sha256
(base32
"1fgvjmvdyh61qn8azpmh19ac58ps5sl2dywwshr56v0svakhwwh9"))
"1lcvslrcw6g4kp9w0h1jx46x6ilz4nzz0k2yrw4gd545k1rwx0c1"))
(file-name (string-append name "-" version))))
(build-system waf-build-system)
(arguments
`(#:configure-flags '("--cxx11" ; required by gtkmm
"--no-phone-home") ; don't contact ardour.org
"--no-phone-home" ; don't contact ardour.org
"--freedesktop" ; install .desktop file
"--test") ; build unit tests
#:phases
(modify-phases %standard-phases
(add-after
'unpack 'set-rpath-in-LDFLAGS
,(ardour-rpath-phase (version-prefix version 1))))
#:tests? #f ; no check target
#:test-target "test"
#:python ,python-2))
(inputs
`(("alsa-lib" ,alsa-lib)
@ -256,6 +258,8 @@ namespace ARDOUR { const char* revision = \"" version "\" ; }")))))
(native-inputs
`(("perl" ,perl)
("cppunit" ,cppunit)
("itstool" ,itstool)
("gettext" ,gettext-minimal)
("pkg-config" ,pkg-config)))
(home-page "http://ardour.org")
(synopsis "Digital audio workstation")

21
emacs/guix-emacs.el → gnu/packages/aux-files/emacs/guix-emacs.el
View File

@ -1,6 +1,6 @@
;;; guix-emacs.el --- Emacs packages installed with Guix
;; Copyright © 2014, 2015, 2016 Alex Kost <alezost@gmail.com>
;; Copyright © 2014, 2015, 2016, 2017 Alex Kost <alezost@gmail.com>
;; This file is part of GNU Guix.
@ -19,22 +19,14 @@
;;; Commentary:
;; This file provides auxiliary code for working with Emacs packages
;; This file provides auxiliary code to autoload Emacs packages
;; installed with Guix.
;;; Code:
(require 'cl-lib)
(unless (require 'guix-profiles nil t)
(defvar guix-user-profile (expand-file-name "~/.guix-profile")))
(defcustom guix-package-enable-at-startup t
"If non-nil, activate Emacs packages installed in a user profile.
Set this variable to nil before requiring `guix-emacs' file to
avoid loading autoloads of Emacs packages installed in
`guix-user-profile'."
:type 'boolean
:group 'guix)
(defvar guix-user-profile (expand-file-name "~/.guix-profile"))
(defvar guix-emacs-autoloads nil
"List of the last loaded Emacs autoloads.")
@ -92,8 +84,8 @@ profiles.
'Autoload' means add directories with Emacs packages to
`load-path' and load 'autoloads' files matching
`guix-emacs-autoloads-regexp'."
(interactive (list (if (fboundp 'guix-profile-prompt)
(funcall 'guix-profile-prompt)
(interactive (list (if (fboundp 'guix-read-package-profile)
(funcall 'guix-read-package-profile)
guix-user-profile)))
(let ((profiles (or profiles
(list "/run/current-system/profile"
@ -115,9 +107,6 @@ profiles.
(setq guix-emacs-autoloads
(append new-autoloads guix-emacs-autoloads))))))))
(when guix-package-enable-at-startup
(guix-emacs-autoload-packages))
(provide 'guix-emacs)
;;; guix-emacs.el ends here

0
gnu/packages/linux-libre-4.1-i686.conf → gnu/packages/aux-files/linux-libre/4.1-i686.conf
View File

0
gnu/packages/linux-libre-4.1-x86_64.conf → gnu/packages/aux-files/linux-libre/4.1-x86_64.conf
View File

0
gnu/packages/linux-libre-4.10-i686.conf → gnu/packages/aux-files/linux-libre/4.10-i686.conf
View File

0
gnu/packages/linux-libre-4.10-x86_64.conf → gnu/packages/aux-files/linux-libre/4.10-x86_64.conf
View File

0
gnu/packages/linux-libre-4.4-i686.conf → gnu/packages/aux-files/linux-libre/4.4-i686.conf
View File

0
gnu/packages/linux-libre-4.4-x86_64.conf → gnu/packages/aux-files/linux-libre/4.4-x86_64.conf
View File

0
gnu/packages/linux-libre-4.9-i686.conf → gnu/packages/aux-files/linux-libre/4.9-i686.conf
View File

0
gnu/packages/linux-libre-4.9-x86_64.conf → gnu/packages/aux-files/linux-libre/4.9-x86_64.conf
View File

52
gnu/packages/backup.scm
View File

@ -3,6 +3,7 @@
;;; Copyright © 2014 Ian Denhardt <ian@zenhack.net>
;;; Copyright © 2015, 2016 Leo Famulari <leo@famulari.name>
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;;
;;; This file is part of GNU Guix.
;;;
@ -24,7 +25,6 @@
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix download)
#:use-module (guix utils)
#:use-module (guix build utils)
#:use-module (guix build-system gnu)
#:use-module (guix build-system python)
#:use-module (gnu packages)
@ -43,6 +43,7 @@
#:use-module (gnu packages mcrypt)
#:use-module (gnu packages nettle)
#:use-module (gnu packages pcre)
#:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages rsync)
@ -67,6 +68,7 @@
(build-system python-build-system)
(native-inputs
`(("util-linux" ,util-linux) ;setsid command, for the tests
("par2cmdline" ,par2cmdline)
("python-pexpect" ,python2-pexpect)
("mock" ,python2-mock)))
(propagated-inputs
@ -83,16 +85,18 @@
#:test-target "test"
#:phases
(modify-phases %standard-phases
(add-before
'build 'patch-source ; embed gpg store name
(add-before 'build 'patch-source
(lambda* (#:key inputs #:allow-other-keys)
;; embed gpg store name
(substitute* "duplicity/gpginterface.py"
(("self.call = 'gpg'")
(string-append "self.call = '" (assoc-ref inputs "gnupg") "/bin/gpg'")))))
(string-append "self.call = '" (assoc-ref inputs "gnupg") "/bin/gpg'")))
(substitute* '("testing/functional/__init__.py"
"testing/overrides/bin/lftp")
(("/bin/sh") (which "sh")))
#t))
(add-before 'check 'check-setup
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "testing/functional/__init__.py"
(("/bin/sh") (which "sh")))
(setenv "HOME" (getcwd)) ;gpg needs to write to $HOME
(setenv "TZDIR" ;some timestamp checks need TZDIR
(string-append (assoc-ref inputs "tzdata")
@ -365,6 +369,42 @@ to a remote location, and only the differences will be transmitted. Finally,
rdiff-backup is easy to use and settings have sensible defaults.")
(license license:gpl2+)))
(define-public rsnapshot
(package
(name "rsnapshot")
(version "1.4.2")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/rsnapshot/rsnapshot/releases/download/"
version "/rsnapshot-" version ".tar.gz"))
(sha256
(base32
"05jfy99a0xs6lvsjfp3wz21z0myqhmwl2grn3jr9clijbg282ah4"))))
(build-system gnu-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(substitute* '("t/cmd-post_pre-exec/conf/pre-true-post-true.conf"
"t/backup_exec/conf/backup_exec_fail.conf"
"t/backup_exec/conf/backup_exec.conf")
(("/bin/true") (which "true"))
(("/bin/false") (which "false")))
(zero? (system* "make" "test")))))))
(inputs
`(("perl" ,perl)
("rsync" ,rsync)))
(home-page "http://rsnapshot.org")
(synopsis "Deduplicating snapshot backup utility based on rsync")
(description "rsnapshot is a filesystem snapshot utility based on rsync.
rsnapshot makes it easy to make periodic snapshots of local machines, and
remote machines over SSH. To reduce the disk space required for each backup,
rsnapshot uses hard links to deduplicate identical files.")
(license license:gpl2+)))
(define-public libchop
(package
(name "libchop")

5
gnu/packages/bash.scm
View File

@ -22,6 +22,7 @@
(define-module (gnu packages bash)
#:use-module (guix licenses)
#:use-module (gnu packages)
#:use-module (gnu packages bootstrap)
#:use-module (gnu packages ncurses)
#:use-module (gnu packages readline)
#:use-module (gnu packages bison)
@ -262,7 +263,7 @@ without modification.")
(define-public bash-completion
(package
(name "bash-completion")
(version "2.4")
(version "2.5")
(source (origin
(method url-fetch)
(uri (string-append
@ -270,7 +271,7 @@ without modification.")
version "/" name "-" version ".tar.xz"))
(sha256
(base32
"1xlhd09sb2w3bw8qaypxgkr0782w082mcbx8zf7yzjgy0996pxy0"))
"1kwmii1z1ljx5i4z702ynsr8jgrq64bj9w9hl3n2aa2kcl659fdh"))
(patches
(search-patches "bash-completion-directories.patch"))))
(build-system gnu-build-system)

6
gnu/packages/benchmark.scm
View File

@ -29,7 +29,7 @@
(define-public fio
(package
(name "fio")
(version "2.17")
(version "2.18")
(source (origin
(method url-fetch)
(uri (string-append
@ -37,10 +37,10 @@
"fio-" version ".tar.bz2"))
(sha256
(base32
"1kxgad5k2m7y637g3kq8jmhwzlg3c64w9ky7066c5l09bwb6l58h"))))
"08kx2mh556xby9saayrbynwrkmh4v8wwrw759nbv025ch3xbw79n"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; No tests.
'(#:test-target "test"
#:phases
(modify-phases %standard-phases
(add-after

47
gnu/packages/bioinformatics.scm
View File

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014, 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2015, 2016, 2017 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
@ -238,7 +238,7 @@ instance, it implements several methods to assess contig-wise read coverage.")
(define-public bamtools
(package
(name "bamtools")
(version "2.3.0")
(version "2.4.1")
(source (origin
(method url-fetch)
(uri (string-append
@ -247,7 +247,7 @@ instance, it implements several methods to assess contig-wise read coverage.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1brry29bw2xr2l9pqn240rkqwayg85b8qq78zk2zs6nlspk4d018"))))
"0jr024kcrhjb82cm69i7p5fcg5375zlc1h3qh2n1v368hcd0qflk"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ;no "check" target
@ -499,6 +499,9 @@ provides the Ribotaper pipeline.")
("python-matplotlib" ,python2-matplotlib)
("python-scipy" ,python2-scipy)
("python-statsmodels" ,python2-statsmodels)))
(native-inputs
`(("python-mock" ,python2-mock)
("python-nose" ,python2-nose)))
(home-page "http://public.bmi.inf.ethz.ch/user/zhongy/RiboDiff/")
(synopsis "Detect translation efficiency changes from ribosome footprints")
(description "RiboDiff is a statistical tool that detects the protein
@ -604,6 +607,8 @@ Python.")
("python-future" ,python-future)
("python-click" ,python-click)
("python-h5py" ,python-h5py)))
(native-inputs
`(("python-nose" ,python-nose)))
(home-page "http://www.biom-format.org")
(synopsis "Biological Observation Matrix (BIOM) format utilities")
(description
@ -1602,6 +1607,7 @@ databases.")
("python-scipy" ,python2-scipy)))
(native-inputs
`(("python-mock" ,python2-mock) ; for tests
("python-nose" ,python2-nose) ; for tests
("python-pytz" ,python2-pytz))) ; for tests
(home-page "https://github.com/YeoLab/clipper")
(synopsis "CLIP peak enrichment recognition")
@ -1978,7 +1984,8 @@ accessing bigWig files.")
(uri (pypi-uri "DendroPy" version))
(sha256
(base32
"15c7s3d5gf19ljsxvq5advaa752wfi7pwrdjyhzmg85hccyvp47p"))))
"15c7s3d5gf19ljsxvq5advaa752wfi7pwrdjyhzmg85hccyvp47p"))
(patches (search-patches "python-dendropy-fix-tests.patch"))))
(build-system python-build-system)
(home-page "http://packages.python.org/DendroPy/")
(synopsis "Library for phylogenetics and phylogenetic computing")
@ -2030,6 +2037,7 @@ trees (phylogenies) and characters.")
("python-pybigwig" ,python2-pybigwig)))
(native-inputs
`(("python-mock" ,python2-mock) ;for tests
("python-nose" ,python2-nose) ;for tests
("python-pytz" ,python2-pytz))) ;for tests
(home-page "https://github.com/fidelram/deepTools")
(synopsis "Tools for normalizing and visualizing deep-sequencing data")
@ -2047,7 +2055,7 @@ identify enrichments with functional annotations of the genome.")
(define-public diamond
(package
(name "diamond")
(version "0.8.34")
(version "0.8.36")
(source (origin
(method url-fetch)
(uri (string-append
@ -2056,7 +2064,7 @@ identify enrichments with functional annotations of the genome.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0jvr34g346gbz7z1zb9bs0vplivm9p4cxk0lbzklvdpa7g236p39"))))
"092smzzjcg51n3x4h84k52ijpz9m40ri838j9k2i463ribc3c8rh"))))
(build-system cmake-build-system)
(arguments
'(#:tests? #f ; no "check" target
@ -2969,28 +2977,10 @@ data. It also provides the bgzip, htsfile, and tabix utilities.")
"1k3x44biak00aiv3hpm1yd6nn4hhp7n0qnbs3zh2q9sw7qr1qj5r"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after
'install 'wrap-program
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(python-version (string-take (string-take-right
(assoc-ref inputs "python") 5) 3))
(path (string-join
(map (lambda (name)
(string-append (assoc-ref inputs name)
"/lib/python" python-version
"/site-packages"))
'("python-scipy"
"python-numpy"
"python-matplotlib"))
":")))
(wrap-program (string-append out "/bin/idr")
`("PYTHONPATH" ":" prefix (,path))))
#t)))))
(inputs
`(#:tests? #f)) ; FIXME: "ImportError: No module named 'utility'"
(propagated-inputs
`(("python-scipy" ,python-scipy)
("python-sympy" ,python-sympy)
("python-numpy" ,python-numpy)
("python-matplotlib" ,python-matplotlib)))
(native-inputs
@ -3679,6 +3669,9 @@ the phenotype as it models the data.")
(build-system python-build-system)
(arguments
`(#:python ,python-2
;; FIXME: Tests fail with "No such file or directory:
;; pbtools/pbtranscript/modified_bx_intervals/intersection_unique.so"
#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'enter-directory

1
gnu/packages/bootstrap.scm
View File

@ -170,6 +170,7 @@ successful, or false to signal an error."
((string=? system "i686-gnu") "/lib/ld.so.1")
((string=? system "aarch64-linux") "/lib/ld-linux-aarch64.so.1")
((string=? system "powerpc-linux") "/lib/ld.so.1")
((string=? system "alpha-linux") "/lib/ld-linux.so.2")
;; XXX: This one is used bare-bones, without a libc, so add a case
;; here just so we can keep going.

9
gnu/packages/calendar.scm
View File

@ -84,13 +84,13 @@ data units.")
(define-public khal
(package
(name "khal")
(version "0.9.2")
(version "0.9.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "khal" version))
(sha256
(base32
"1ryh5c7408w8gpql5s9mkxkvz1ngnds3xm43p7r96ynx8prr9swp"))))
"1iva6cw2x3p2jzjj6bsyx7lc7yxin4fsd37j9c96j07x16p4imyl"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
@ -112,7 +112,8 @@ data units.")
"/share/zoneinfo/Zulu"))
(zero? (system* "py.test" "tests")))))))
(native-inputs
`(("python-pytest" ,python-pytest)
;; XXX Uses tmpdir_factory, introduced in pytest 2.8.
`(("python-pytest" ,python-pytest-2.9.2)
("python-pytest-cov" ,python-pytest-cov)
("python-setuptools-scm" ,python-setuptools-scm)
;; Required for tests
@ -125,7 +126,7 @@ data units.")
`(("sqlite" ,sqlite)))
(propagated-inputs
`(("python-configobj" ,python-configobj)
("python-dateutil-2" ,python-dateutil-2)
("python-dateutil" ,python-dateutil)
("python-icalendar" ,python-icalendar)
("python-tzlocal" ,python-tzlocal)
("python-urwid" ,python-urwid)

25
gnu/packages/cdrom.scm
View File

@ -6,6 +6,7 @@
;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Alex Kost <alezost@gmail.com>
;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017 John Darrington <jmd@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -496,3 +497,27 @@ session, and it can create M3U playlists.")
(synopsis "Command-line program to extract audio CDs")
(description "RipIT is used to extract audio from CDs.")
(license gpl2)))
(define-public ccd2cue
(package
(name "ccd2cue")
(version "0.5")
(source
(origin
(method url-fetch)
(uri (string-append
"mirror://gnu/ccd2cue/ccd2cue-" version
".tar.gz"))
(sha256
(base32
"1icrkg25hwx4gsn3dski2172ia4ywjh8m1sa17zmjclnrgdwy9c7"))))
(build-system gnu-build-system)
(synopsis "CCD to CUE sheet conversion")
(description
"GNU ccd2cue is a preprocessor for CD burning software that allows
the conversion of the proprietary CCD format to the CUE format, which
is well-supported by free software. These files are commonly
distributed with CD images and are used to describe how tracks are
laid out on the image.")
(home-page "http://www.gnu.org/software/ccd2cue")
(license gpl3+)))

4
gnu/packages/certs.scm
View File

@ -73,7 +73,7 @@
(define-public nss-certs
(package
(name "nss-certs")
(version "3.27.1")
(version "3.29.2")
(source (origin
(method url-fetch)
(uri (let ((version-with-underscores
@ -84,7 +84,7 @@
"nss-" version ".tar.gz")))
(sha256
(base32
"0sraxk26swlgl7rl742rkfp5k251v5z3lqw9k8ikin0cjfhkfdpx"))))
"149807rmzb76hnh48rw4m9jw83iw0168njzchz0hmbsgc8mk0i5w"))))
(build-system gnu-build-system)
(outputs '("out"))
(native-inputs

44
gnu/packages/check.scm
View File

@ -201,7 +201,7 @@ normally do not detect. The goal is to detect only real errors in the code
(define-public googletest
(package
(name "googletest")
(version "1.7.0")
(version "1.8.0")
(source
(origin
(method url-fetch)
@ -210,46 +210,10 @@ normally do not detect. The goal is to detect only real errors in the code
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1k0nf1l9cb3prdmsvaajl5i31bx86c1mw0d5jgzykz7rzm36afpp"))))
(build-system gnu-build-system)
"1n5p1m2m3fjrjdj752lf92f9wq3pl5cbsfrb49jqbg52ghkz99jq"))))
(build-system cmake-build-system)
(native-inputs
`(("python-2" ,python-2)
("autoconf" ,autoconf)
("automake" ,automake)
("libtool" ,libtool)))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'configure 'autoconf
(lambda _
(zero? (system* "autoreconf" "-vfi"))))
(add-before 'autoconf 'generate-headers
(lambda _
(begin
(delete-file "include/gtest/gtest-param-test.h")
(system* "python2" "scripts/pump.py"
"include/gtest/gtest-param-test.h.pump")
(delete-file "include/gtest/internal/gtest-tuple.h")
(system* "python2" "scripts/pump.py"
"include/gtest//internal/gtest-tuple.h.pump")
(delete-file
"include/gtest/internal/gtest-param-util-generated.h")
(system*
"python2" "scripts/pump.py"
"include/gtest/internal/gtest-param-util-generated.h.pump")
(delete-file "include/gtest/internal/gtest-type-util.h")
(system* "python2" "scripts/pump.py"
"include/gtest/internal/gtest-type-util.h.pump"))))
(replace 'install
(lambda _
(let ((out (assoc-ref %outputs "out")))
(begin
(install-file "lib/.libs/libgtest_main.a"
(string-append out "/lib"))
(install-file "lib/.libs/libgtest.a"
(string-append out "/lib"))
(copy-recursively "include"
(string-append out "/include")))))))))
`(("python-2" ,python-2)))
(home-page "https://github.com/google/googletest/")
(synopsis "Test discovery and XUnit test framework")
(description "Google Test features an XUnit test framework, automated test

22
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View File

@ -945,7 +945,7 @@ well as bzip2.")
(define-public snappy
(package
(name "snappy")
(version "1.1.3")
(version "1.1.4")
(source (origin
(method url-fetch)
(uri (string-append
@ -953,7 +953,7 @@ well as bzip2.")
version "/" name "-" version ".tar.gz"))
(sha256
(base32
"1wzf8yif5ym2gj52db6v5m1pxnmn258i38x7llk9x346y2nq47ig"))))
"0mq0nz8gbi1sp3y6xcg0a6wbvnd6gc717f3vh2xrjmfj5w9gwjqk"))))
(build-system gnu-build-system)
(home-page "https://github.com/google/snappy")
(synopsis "Fast compressor/decompressor")
@ -1128,3 +1128,21 @@ or junctions, and always follows hard links.")
;; libzpaq.cpp contains a mix of public-domain and
;; expat-licenced (or ‘MIT’) code.
license:expat))))
(define-public unrar
(package
(name "unrar")
(version "0.0.1")
(source (origin
(method url-fetch)
(uri (string-append
"http://download.gna.org/unrar/unrar-" version ".tar.gz"))
(sha256
(base32
"1fgmjaxffj3shyxgy765jhxwz1cq88hk0fih1bsdzyvymyyz6mz7"))))
(build-system gnu-build-system)
(home-page "http://download.gna.org/unrar")
(synopsis "RAR archive extraction tool")
(description "Unrar is a simple command-line program to list and extract
RAR archives.")
(license license:gpl2+)))

4
gnu/packages/curl.scm
View File

@ -40,14 +40,14 @@
(define-public curl
(package
(name "curl")
(version "7.52.1")
(version "7.53.0")
(source (origin
(method url-fetch)
(uri (string-append "https://curl.haxx.se/download/curl-"
version ".tar.lzma"))
(sha256
(base32
"0r937wplchjxifxqqcjxd9rzp6l9rqqdfjn41x1y4djrh95nsa24"))))
"1k0i31xygb804c61llhin5wbpcscg4gfqmbxcfkpdr1alwh7igrq"))))
(build-system gnu-build-system)
(outputs '("out"
"doc")) ;1.2 MiB of man3 pages

41
gnu/packages/databases.scm
View File

@ -8,7 +8,7 @@
;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is>
;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net>
;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
;;; Copyright © 2016 David Craven <david@craven.ch>
;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
@ -252,7 +252,7 @@ SQL, Key/Value, XML/XQuery or Java Object storage for their data model.")
(define-public leveldb
(package
(name "leveldb")
(version "1.19")
(version "1.20")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/google/leveldb"
@ -260,7 +260,7 @@ SQL, Key/Value, XML/XQuery or Java Object storage for their data model.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"00jjgs9xlwycfkg0xd7n1rj6v9zrx7xc7hann6zalrjyhap18ykx"))))
"0r36bcrj6b2afsp4aw1gjai3jbs1c7734pxpc1jz7hh9nasyiazm"))))
(build-system gnu-build-system)
(arguments
'(#:make-flags (list "CC=gcc")
@ -553,7 +553,7 @@ types are supported, as is encryption.")
(define-public rocksdb
(package
(name "rocksdb")
(version "5.1.2")
(version "5.1.4")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/facebook/rocksdb"
@ -561,7 +561,7 @@ types are supported, as is encryption.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1qdbs13al7g45xc2j44wzx0ywrg32q1gsdhk5j6j4952xg91rfmh"))
"0ddyj8lh5jk6vx675pdg4jhgs7c12ckw5j31rz85jlrds68ygrry"))
(modules '((guix build utils)))
(snippet
'(begin
@ -1203,6 +1203,37 @@ and B+ Tree data storage models. It is a fast key-value lightweight
database and supports many programming languages. It is a NoSQL database.")
(license license:gpl3+)))
(define-public tokyocabinet
(package
(name "tokyocabinet")
(version "1.4.48")
(source
(origin
(method url-fetch)
(uri (string-append "http://fallabs.com/tokyocabinet/"
name "-" version ".tar.gz"))
(sha256
(base32
"140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
(list "--enable-pthread" "--enable-off64" "--enable-fastest"
(string-append "LDFLAGS=-Wl,-rpath="
(assoc-ref %outputs "out") "/lib"))))
(inputs
`(("zlib" ,zlib)))
(home-page "http://fallabs.com/tokyocabinet/")
(synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
(description
"Tokyo Cabinet is a library of routines for managing a database.
The database is a simple data file containing records, each is a pair of a
key and a value. Every key and value is serial bytes with variable length.
Both binary data and character string can be used as a key and a value.
There is neither concept of data tables nor data types. Records are
organized in hash table, B+ tree, or fixed-length array.")
(license license:lgpl2.1+)))
(define-public wiredtiger
(package
(name "wiredtiger")

6
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@ -55,15 +55,13 @@ clients.")
(define-public vdirsyncer
(package
(name "vdirsyncer")
(version "0.14.1")
(version "0.15.0")
(source (origin
(method url-fetch)
(uri (pypi-uri name version))
(patches
(search-patches "vdirsyncer-test-suite-slow-machines.patch"))
(sha256
(base32
"044f01fjd8dpz4y9dm3qcc1a8cihcxxbr1sz6y6fkvglpb6k85y5"))))
"08aa5yxcj7ziz2r0hz4p554q8hgpfl2bh8r6r85f4g24mg6arxsj"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases

4
gnu/packages/disk.scm
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@ -302,14 +302,14 @@ and can dramatically shorten the lifespan of the drive if left unchecked.")
(define-public gparted
(package
(name "gparted")
(version "0.28.0")
(version "0.28.1")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/gparted/gparted/gparted-"
version "/gparted-" version ".tar.gz"))
(sha256
(base32 "1w9xsph6fpr7l96b3bxl1bgs94cfp9iisg694h8w3fahihwldzdr"))))
(base32 "0cyk8lpimm6wani8khw0szwqkgw5wpq2mfnfxkbgfm2774a1z2bn"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; Tests require a network connection.

13
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View File

@ -106,6 +106,10 @@ to the @dfn{don't repeat yourself} (DRY) principle.")
(base32
"0906hms6y6znjhpd0g4wmzv9vcla4brkdpsm4zha9zdj8g5vq2hd"))))
(build-system python-build-system)
(arguments
;; FIXME: Upstream uses a 'runtests.py' script that is not
;; present in the pypi tarball.
'(#:tests? #f))
(propagated-inputs
`(("python-django" ,python-django)))
(home-page "https://github.com/alsoicode/django-simple-math-captcha")
@ -131,7 +135,8 @@ with arguments to the field constructor.")
"1mmc7zsz3dlhs6sx4sppkj1vgshabi362r1a8b8wpj1qfximpqcb"))))
(build-system python-build-system)
(arguments
`(#:phases
`(#:tests? #f ; FIXME: How to run tests?
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-setuppy
(lambda _
@ -163,6 +168,12 @@ useful tools for testing Django applications and projects.")
(base32
"0f78hmk8c903zwfzlsiw7ivgag81ymmb5hi73rzxbhnlg2v0l3fx"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(zero? (system* "python" "runtests.py")))))))
(native-inputs
`(("python-django" ,python-django)
("python-mock" ,python-mock)))

38
gnu/packages/education.scm
View File

@ -43,44 +43,6 @@
#:use-module (guix build-system cmake)
#:use-module (srfi srfi-1))
(define-public stellarium
(package
(name "stellarium")
(version "0.14.2")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/stellarium/"
"Stellarium-sources/"
version "/stellarium-" version ".tar.gz"))
(sha256 (base32
"1xxil0rv61zc08znfv83cpsc47y1gjl2f3njhz0pn5zd8jpaa15a"))))
(build-system cmake-build-system)
(inputs
`(("qtbase" ,qtbase)
("zlib" ,zlib)
("qtserialport" ,qtserialport)
("qtscript" ,qtscript)
("gettext" ,gettext-minimal)))
(native-inputs
`(("qtbase" ,qtbase) ;Qt MOC is needed at compile time
("qttools" ,qttools)
("perl" ,perl))) ;for 'pod2man'
(arguments
`(#:test-target "tests"
#:phases (modify-phases %standard-phases
(add-before 'check 'set-offscreen-display
(lambda _
(setenv "QT_QPA_PLATFORM" "offscreen")
(setenv "HOME" "/tmp")
#t)))))
(home-page "http://www.stellarium.org/")
(synopsis "3D sky viewer")
(description "Stellarium is a planetarium. It shows a realistic sky in
3D, just like what you see with the naked eye, binoculars, or a telescope. It
can be used to control telescopes over a serial port for tracking celestial
objects.")
(license license:gpl2+)))
(define-public gcompris
(package
(name "gcompris")

48
gnu/packages/emacs.scm
View File

@ -133,22 +133,20 @@
(("/bin/pwd")
"pwd"))))
(add-after 'install 'install-site-start
;; Copy guix-emacs.el from Guix and add it to site-start.el. This
;; way, Emacs packages provided by Guix and installed in
;; Use 'guix-emacs' in "site-start.el". This way, Emacs packages
;; provided by Guix and installed in
;; ~/.guix-profile/share/emacs/site-lisp/guix.d/PACKAGE-VERSION are
;; automatically found.
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((guix-src (assoc-ref inputs "guix-src"))
(out (assoc-ref outputs "out"))
(lisp-dir (string-append out "/share/emacs/site-lisp"))
(unpack (assoc-ref %standard-phases 'unpack)))
(mkdir "guix")
(with-directory-excursion "guix"
(apply unpack (list #:source guix-src))
(install-file "emacs/guix-emacs.el" lisp-dir))
(let* ((out (assoc-ref outputs "out"))
(lisp-dir (string-append out "/share/emacs/site-lisp")))
(copy-file (assoc-ref inputs "guix-emacs.el")
(string-append lisp-dir "/guix-emacs.el"))
(with-output-to-file (string-append lisp-dir "/site-start.el")
(lambda ()
(display "(require 'guix-emacs nil t)")))
(display
(string-append "(when (require 'guix-emacs nil t)\n"
" (guix-emacs-autoload-packages))\n"))))
#t))))))
(inputs
`(("gnutls" ,gnutls)
@ -175,13 +173,13 @@
("libsm" ,libsm)
("alsa-lib" ,alsa-lib)
("dbus" ,dbus)
("guix-src" ,(package-source guix))
;; multilingualization support
("libotf" ,libotf)
("m17n-lib" ,m17n-lib)))
(native-inputs
`(("pkg-config" ,pkg-config)
`(("guix-emacs.el" ,(search-auxiliary-file "emacs/guix-emacs.el"))
("pkg-config" ,pkg-config)
("texinfo" ,texinfo)))
(native-search-paths
@ -1326,7 +1324,7 @@ type, for example: packages, buffers, files, etc.")
(define-public emacs-guix
(package
(name "emacs-guix")
(version "0.2.2")
(version "0.3")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/alezost/guix.el"
@ -1334,7 +1332,7 @@ type, for example: packages, buffers, files, etc.")
"/emacs-guix-" version ".tar.gz"))
(sha256
(base32
"1i47yh24xvgmnc778765g3j9ip0xb2y85v6w83r4qmkigk9rl2ck"))))
"1327zp140c7acckk0ajl88cgwr0lk9j3mb67nsq2janxrkwmj6br"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@ -3834,3 +3832,23 @@ mode-line.")
(description
"Emacs minor mode for redisplaying parts of the buffer as pretty symbols.")
(license license:gpl3+)))
(define-public emacs-yasnippet
(package
(name "emacs-yasnippet")
(version "0.11.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/joaotavora/yasnippet/"
"archive/" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"15di6mkkf09b7qddpsrm0qln02hji3sx8blya5jxssi9wxxx9iq5"))))
(build-system emacs-build-system)
(home-page "http://github.com/joaotavora/yasnippet")
(synopsis "Yet another snippet extension for Emacs")
(description
"YASnippet is a template system for Emacs. It allows you to type an
abbreviation and automatically expand it into function templates.")
(license license:gpl3+)))

53
gnu/packages/embedded.scm
View File

@ -30,12 +30,14 @@
#:use-module (guix build utils)
#:use-module (gnu packages)
#:use-module (gnu packages autotools)
#:use-module ((gnu packages base) #:prefix base:)
#:use-module (gnu packages bison)
#:use-module (gnu packages cross-base)
#:use-module (gnu packages dejagnu)
#:use-module (gnu packages flex)
#:use-module (gnu packages gcc)
#:use-module (gnu packages gdb)
#:use-module (gnu packages guile)
#:use-module (gnu packages libftdi)
#:use-module (gnu packages libusb)
#:use-module (gnu packages perl)
@ -719,3 +721,54 @@ toolchain, the loader, the Openspin compiler, the Spin2cpp tool, and the Spin
simulator.")
(home-page (package-home-page propeller-gcc))
(license (package-license propeller-gcc))))
(define-public binutils-vc4
(let ((commit "708acc851880dbeda1dd18aca4fd0a95b2573b36"))
(package
(name "binutils-vc4")
(version (string-append "2.23.51-0." (string-take commit 7)))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/puppeh/binutils-vc4.git")
(commit commit)))
(sha256
(base32
"1kdrz6fki55lm15rwwamn74fnqpy0zlafsida2zymk76n3656c63"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--target=vc4-elf"
"--disable-werror"
"--enable-cgen-maint")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'unpack-cgen
(lambda* (#:key inputs #:allow-other-keys)
(copy-recursively (string-append (assoc-ref inputs "cgen")
"/cgen") "cgen")
#t))
(add-after 'unpack-cgen 'fix-cgen-guile
(lambda _
(substitute* "opcodes/Makefile.in"
(("guile\\{,-\\}1.8") "guile"))
(zero? (system* "which" "guile")))))))
(native-inputs
`(("cgen"
,(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/puppeh/cgen.git")
(commit "d8e2a9eb70425f180fdd5bfd032884b0855f2032")))
(sha256
(base32
"14b3h2ji740s8zq5vwm4qdcxs4aa4wxi6wb9di3bv1h39x14nyr9"))))
("texinfo" ,texinfo)
("flex" ,flex)
("bison" ,bison)
("guile-1.8" ,guile-1.8)
("which" ,base:which)))
(synopsis "Binutils for VC4")
(description "This package provides @code{binutils} for VideoCore IV,
the Raspberry Pi chip.")
(license license:gpl3+)
(home-page "https://github.com/puppeh/vc4-toolchain/"))))

24
gnu/packages/engineering.scm
View File

@ -750,3 +750,27 @@ electrical diagrams), gerbview (viewing Gerber files) and others.")
(description "This package provides Kicad component, footprint and 3D
render model libraries.")
(license license:lgpl2.0+))))
(define-public linsmith
(package
(name "linsmith")
(version "0.99.30")
(source (origin
(method url-fetch)
(uri (string-append
"mirror://sourceforge/linsmith/linsmith/linsmith-"
version "/linsmith-" version ".tar.gz"))
(sha256
(base32
"18qslhr2r45rhpj4v6bjcqx189vs0bflvsj271wr7w8kvh69qwvn"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("gtk" ,gtk+-2)
("libgnome" ,libgnomeui)))
(home-page "http://jcoppens.com/soft/linsmith/index.en.php")
(synopsis "Smith Charting program")
(description "LinSmith is a Smith Charting program, mainly designed for
educational use. As such, there is an emphasis on capabilities that improve
the 'showing the effect of'-style of operation.")
(license license:gpl2+)))

16
gnu/packages/enlightenment.scm
View File

@ -197,7 +197,7 @@ Libraries with some extra bells and whistles.")
(define-public enlightenment
(package
(name "enlightenment")
(version "0.21.5")
(version "0.21.6")
(source (origin
(method url-fetch)
(uri
@ -205,7 +205,7 @@ Libraries with some extra bells and whistles.")
name "/" name "-" version ".tar.xz"))
(sha256
(base32
"1fslq70z4s6v9ipahnk8s5fgqnqq4njv4rlqv951r1bh1xk5lx7h"))))
"0gan3c8jbvhcmvb2fpbprr3m6db0afg1dnrb87nbqb399nsi81zd"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--enable-mount-eeze")))
@ -253,7 +253,17 @@ embedded systems.")
(lambda _
(setenv "CFLAGS"
(string-append "-I" (assoc-ref %build-inputs "python-dbus")
"/include/dbus-1.0")))))))
"/include/dbus-1.0"))
#t))
(add-before 'check 'set-environment
(lambda _
;; Some tests require write access to HOME.
(setenv "HOME" "/tmp")
#t)))
;; FIXME: Some tests require a running D-Bus server or a network
;; connection and should be disabled. Other test failures looks
;; legitimate. Disabled for now, needs work!
#:tests? #f))
(native-inputs
`(("pkg-config" ,pkg-config)
("python-cython" ,python-cython)))

1
gnu/packages/finance.scm
View File

@ -24,7 +24,6 @@
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix build utils)
#:use-module (guix build-system gnu)
#:use-module (guix build-system cmake)
#:use-module (guix build-system python)

4
gnu/packages/fontutils.scm
View File

@ -401,7 +401,7 @@ and returns a sequence of positioned glyphids from the font.")
(define-public potrace
(package
(name "potrace")
(version "1.13")
(version "1.14")
(source
(origin
(method url-fetch)
@ -409,7 +409,7 @@ and returns a sequence of positioned glyphids from the font.")
"/potrace-" version ".tar.gz"))
(sha256
(base32
"115p2vgyq7p2mf4nidk2x3aa341nvv2v8ml056vbji36df5l6lk2"))))
"0znr9i0ljb818qiwm22zw63g11a4v08gc5xkh0wbdp6g259vcwnv"))))
(build-system gnu-build-system)
(native-inputs `(("ghostscript" ,ghostscript))) ;for tests
(inputs `(("zlib" ,zlib)))

4
gnu/packages/freedesktop.scm
View File

@ -88,14 +88,14 @@ freedesktop.org project.")
(define-public libinput
(package
(name "libinput")
(version "1.6.0")
(version "1.6.3")
(source (origin
(method url-fetch)
(uri (string-append "https://freedesktop.org/software/libinput/"
name "-" version ".tar.xz"))
(sha256
(base32
"0cjq4mjqx8c7iiign330s34dvpw38rlv8byaxlx68p3kim8lylxp"))))
"18bx2fz04mf41nf3021pr9k3f741zvc6i8pzvypc6ycffac2gnkl"))))
(build-system gnu-build-system)
(native-inputs
`(("cairo" ,cairo)

77
gnu/packages/ftp.scm
View File

@ -3,6 +3,7 @@
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Rene Saavedra <rennes@openmailbox.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -26,12 +27,21 @@
#:use-module (guix packages)
#:use-module (gnu packages)
#:use-module (gnu packages autotools)
#:use-module (gnu packages check)
#:use-module (gnu packages compression)
#:use-module (gnu packages databases)
#:use-module (gnu packages freedesktop)
#:use-module (gnu packages gettext)
#:use-module (gnu packages glib)
#:use-module (gnu packages gtk)
#:use-module (gnu packages libidn)
#:use-module (gnu packages ncurses)
#:use-module (gnu packages readline)
#:use-module (gnu packages nettle)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages readline)
#:use-module (gnu packages tls)
#:use-module (gnu packages compression))
#:use-module (gnu packages wxwidgets)
#:use-module (gnu packages xml))
(define-public lftp
(package
@ -159,3 +169,66 @@ maintaining a web page or other FTP archive. It synchronizes a set of
local files to a remote server by performing uploads and remote deletes
as required.")
(license gpl2+)))
(define-public libfilezilla
(package
(name "libfilezilla")
(version "0.9.0")
(source
(origin
(method url-fetch)
(uri (string-append "http://download.filezilla-project.org/"
name "/" name "-" version ".tar.bz2"))
(sha256
(base32
"0340v5xs48f28q2d16ldb9359dkzlhl4l449mgyv3qabnlz2pl21"))))
(build-system gnu-build-system)
(native-inputs
`(("cppunit" ,cppunit)))
(home-page "https://lib.filezilla-project.org")
(synopsis "Cross-platform C++ library used by Filezilla client")
(description
"This package provides some basic functionality to build high-performing,
platform-independent programs.")
(license gpl2+)))
(define-public filezilla
(package
(name "filezilla")
(version "3.24.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://sourceforge.net/projects/" name
"/files/FileZilla_Client/" version
"/FileZilla_" version "_src" ".tar.bz2"))
(sha256
(base32
"0ahcld3g6jj92nakm5i58wgmcv6f4l9yisw3aqbc2ry0gs679pg6"))))
(build-system gnu-build-system)
(arguments
;; Don't let filezilla phone home to check for updates.
'(#:configure-flags '("--disable-autoupdatecheck")))
(native-inputs
`(("gettext" ,gettext-minimal)
("pkg-config" ,pkg-config)
("pugixml" ,pugixml)
("xdg-utils" ,xdg-utils)))
(inputs
`(("dbus" ,dbus)
("gnutls" ,gnutls)
("gtk+" ,gtk+)
("libfilezilla" ,libfilezilla)
("libidn" ,libidn)
("nettle" ,nettle)
("sqlite" ,sqlite)
("wxwidgets" ,wxwidgets)))
(home-page "https://filezilla-project.org")
(synopsis "Full-featured graphical FTP/FTPS/SFTP client")
(description
"Filezilla client supports FTP, FTP over SSL/TLS (FTPS),
SSH File Transfer Protocol (SFTP), HTTP/1.1, SOCKS5, FTP-Proxy, IPv6
and others features such as bookmarks, drag and drop, filename filters,
directory comparison and more.")
(license gpl2+)
(properties '((upstream-name . "FileZilla")))))

24
gnu/packages/game-development.scm
View File

@ -526,18 +526,16 @@ interface (API).")
(define-public python-pygame
(package
(name "python-pygame")
(version "1.9.1")
(version "1.9.3")
(source (origin
(method url-fetch)
(uri (string-append "http://pygame.org/ftp/pygame-"
version "release.tar.gz"))
(uri (pypi-uri "pygame" version))
(sha256
(base32
"0cyl0ww4fjlf289pjxa53q4klyn55ajvkgymw0qrdgp4593raq52"))))
"1hlydiyygl444bq5m5g8n3jsxsgrdyxlm42ipmfbw36wkf0j243m"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2
#:tests? #f ; Tests require pygame to be installed first.
`(#:tests? #f ; Tests require pygame to be installed first.
#:phases
(modify-phases %standard-phases
;; Set the paths to the dependencies manually because
@ -553,6 +551,7 @@ interface (API).")
(smpeg-ref (assoc-ref inputs "libsmpeg"))
(png-ref (assoc-ref inputs "libpng"))
(jpeg-ref (assoc-ref inputs "libjpeg"))
(freetype-ref (assoc-ref inputs "freetype"))
(v4l-ref (assoc-ref inputs "v4l-utils"))
(out-ref (assoc-ref outputs "out")))
(substitute* "Setup.in"
@ -582,9 +581,14 @@ interface (API).")
(("JPEG = -ljpeg")
(string-append "JPEG = -I" jpeg-ref "/include -L"
jpeg-ref "/lib -ljpeg")))
(substitute* "Setup.in"
(("FREETYPE = -lfreetype")
(string-append "FREETYPE = -I" freetype-ref "/include/freetype2 -L"
freetype-ref "/lib -lfreetype")))
(substitute* "Setup.in"
(("^pypm") "#pypm"))
(substitute* "src/movie.c")
;; Create a path to a header file provided by v4l-utils.
(system* "mkdir" "linux")
(system* "ln" "--symbolic"
@ -592,7 +596,8 @@ interface (API).")
"linux/videodev.h")
(system* "ln" "--symbolic" "Setup.in" "Setup")))))))
(inputs
`(("sdl" ,sdl)
`(("freetype" ,freetype)
("sdl" ,sdl)
("sdl-image" ,sdl-image)
("sdl-mixer" ,sdl-mixer)
("sdl-ttf" ,sdl-ttf)
@ -619,3 +624,6 @@ to create fully featured games and multimedia programs in the python language.")
license:psfl
license:public-domain
license:lgpl2.1+))))
(define-public python2-pygame
(package-with-python2 python-pygame))

65
gnu/packages/games.scm
View File

@ -175,6 +175,49 @@ You may even apply photos to the faces instead of colors. The game is
scriptable with Guile.")
(license license:gpl3+)))
(define-public gnushogi
(package
(name "gnushogi")
(version "1.4.2")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://gnu/gnushogi/gnushogi-"
version ".tar.gz"))
(sha256
(base32
"0a9bsl2nbnb138lq0h14jfc5xvz7hpb2bcsj4mjn6g1hcsl4ik0y"))))
(arguments `(#:tests? #f)) ;; No check target.
(build-system gnu-build-system)
(home-page "http://www.gnu.org/software/gnushogi/")
(synopsis "The game of Shogi (Japanese chess)")
(description "GNU Shogi is a program that plays the game Shogi (Japanese
Chess). It is similar to standard chess but this variant is far more complicated.")
(license license:gpl3+)))
(define-public xshogi
(package
(name "xshogi")
(version "1.4.2")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://gnu/gnushogi/xshogi-"
version ".tar.gz"))
(sha256
(base32
"1dns0nhymak44by18sv48m4xb2skiwbi2i3nb9hl6w9iwd2i2brf"))))
(build-system gnu-build-system)
(inputs
`(("libxaw" ,libxaw)
("libxt" ,libxt)))
(home-page "http://www.gnu.org/software/gnushogi/")
(synopsis "User interface for gnushogi")
(description "A graphical user interface for the package @code{gnushogi}.")
;; Contains a copy of GPLv3 but the licence notices simply
;; state "GNU General Public Licence" without specifying a version.
(license license:gpl1+)))
(define-public abbaye
(package
(name "abbaye")
@ -840,15 +883,15 @@ using the curses.h library for screen control.")
(define-public glulxe
(package
(name "glulxe")
(version "0.5.2")
(version "0.5.4")
(source
(origin
(method url-fetch)
(uri (string-append "http://www.ifarchive.org/if-archive/programming/"
"glulx/interpreters/glulxe/glulxe-052.tar.gz"))
"glulx/interpreters/glulxe/glulxe-054.tar.gz"))
(sha256
(base32
"19iw6kl8ncqcy9pv4gsqfh3xsa1n94zd234rqavvmxccnf3nj19g"))))
"0vipydg6ra90yf9b3ipgppwxyb2xdhcxwvirgjy0v20wlf56zhhz"))))
(build-system gnu-build-system)
(inputs `(("glk" ,glkterm)))
(arguments
@ -873,7 +916,7 @@ using the curses.h library for screen control.")
playing interactive fiction. It was designed by Andrew Plotkin to relieve
some of the restrictions in the venerable Z-machine format. This is the
reference interpreter, using Glk API.")
(license (license:fsf-free "file://README"))))
(license license:expat)))
(define-public fizmo
(package
@ -2574,7 +2617,7 @@ tactics.")
(define-public starfighter
(package
(name "starfighter")
(version "1.6")
(version "1.7")
(source (origin
(method url-fetch)
(uri (string-append
@ -2583,18 +2626,8 @@ tactics.")
name "-" version "-src.tar.gz"))
(sha256
(base32
"1qb5nk0b3d0ia5zszmg4a3ydf4fiy39fmymb66vwkqn4djajdhzq"))))
"1646hpjq8bz2fkfkja1dah511hn7zd2r7da4w9c9blhad3p5732v"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; no check target
#:make-flags
(let ((out (assoc-ref %outputs "out")))
(list (string-append "PREFIX=" out)
(string-append "BINDIR=" out "/bin/")))
#:phases
(modify-phases %standard-phases
;; no configure script
(delete 'configure))))
(native-inputs
`(("pkg-config" ,pkg-config)))
(inputs

3
gnu/packages/ghostscript.scm
View File

@ -59,7 +59,8 @@
focus on accuracy and performance. It uses the International Color
Consortium standard (ICC), approved as ISO 15076-1.")
(license license:x11)
(home-page "http://www.littlecms.com/")))
(home-page "http://www.littlecms.com/")
(properties '((cpe-name . "little_cms_color_engine")))))
(define-public libpaper
(package

12
gnu/packages/gnome.scm
View File

@ -5606,7 +5606,7 @@ functionality and behavior.")
(define-public arc-theme
(package
(name "arc-theme")
(version "20161119")
(version "20170302")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/horst3180/arc-theme"
@ -5614,7 +5614,7 @@ functionality and behavior.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1kbhaxmydyip3vdw4kf8rk776jcd9wf0w7z6h2i4naxdn4rsnw54"))))
"0igxpngnkf1wpsg872a9jg3c9f5z8afm312yfbillz16mk8w39cw"))))
(build-system gnu-build-system)
(arguments
'(#:phases
@ -5639,7 +5639,7 @@ like GNOME, Unity, Budgie, Pantheon, XFCE, Mate, etc.")
(define-public moka-icon-theme
(package
(name "moka-icon-theme")
(version "5.3.1")
(version "5.3.5")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/moka-project"
@ -5648,7 +5648,7 @@ like GNOME, Unity, Budgie, Pantheon, XFCE, Mate, etc.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1lnk7p8dsd9xh6cgz5krvlcr457w8yl4m6p6s5c2g5narsjswzrm"))))
"062rab0ggmgb3y0d6b3k5d47wsadi28cdnyyr2vqbjhza01dglci"))))
(build-system gnu-build-system)
(arguments
'(#:phases
@ -5674,7 +5674,7 @@ simple and consistent.")
(define-public arc-icon-theme
(package
(name "arc-icon-theme")
(version "20160605")
(version "20161122")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/horst3180/arc-icon-theme"
@ -5682,7 +5682,7 @@ simple and consistent.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1npf0ki0j0llrw9wbffhxxa1cdms0q7b8xlg9m943dd9g7pgdm2p"))))
"1ya1cqvv8q847c0rpcg6apzky87q3h04y8jz5nmi52qk6kg8si0b"))))
(build-system gnu-build-system)
(arguments
'(#:phases

10
gnu/packages/gnunet.scm
View File

@ -184,16 +184,14 @@ and support for SSL3 and TLS.")
(define-public gnurl
(package
(name "gnurl")
(version "7.52.1")
(version "7.53.1")
(source (origin
(method url-fetch)
(uri (let ((version-with-underscores
(string-join (string-split version #\.) "_")))
(string-append "https://gnunet.org/sites/default/files/"
name "-" version-with-underscores ".tar.bz2")))
(uri (string-append "https://gnunet.org/sites/default/files/"
name "-" version ".tar.bz2"))
(sha256
(base32
"1gn6mvab2vhfj9637ykg1zjzb23fngfnyd24wlgxmjhf49pn334h"))))
"1ah2304cm6y7d201vdph170mrwxmg6r72v2zsxzjn0jk68d8kb6d"))))
(build-system gnu-build-system)
(outputs '("out"
"doc")) ; 1.5 MiB of man3 pages

37
gnu/packages/gnupg.scm
View File

@ -217,14 +217,15 @@ compatible to GNU Pth.")
(define-public gnupg
(package
(name "gnupg")
(version "2.1.18")
(version "2.1.19")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnupg/gnupg/gnupg-" version
".tar.bz2"))
(patches (search-patches "gnupg-2.1-fix-Y2038-test-failure.patch"))
(sha256
(base32
"157rrv3ly9j2k0acz43nhiba5hfl6h7048jvj55wwqjmgsmnyk6h"))))
"1w4vccmb5l50lm4yrz9vkdj7whbfvzx543r55362kkj1aqgyvk26"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@ -243,7 +244,11 @@ compatible to GNU Pth.")
("sqlite" ,sqlite)
("zlib" ,zlib)))
(arguments
`(#:configure-flags '("--enable-gpg2-is-gpg")
`(#:configure-flags '("--enable-gpg2-is-gpg"
;; Otherwise, the test suite looks for the `gpg`
;; executable in its installation directory in
;; /gnu/store before it has been installed.
"--enable-gnupg-builddir-envvar")
#:phases
(modify-phases %standard-phases
(add-before 'configure 'patch-paths
@ -259,11 +264,27 @@ compatible to GNU Pth.")
(("/usr/bin/env gpgscm")
(string-append (getcwd) "/tests/gpgscm/gpgscm")))
#t))
;; If this variable is undefined, /bin/pwd is invoked.
(add-before 'check 'set-gnupg-home
(lambda _
(setenv "GNUPGHOME" (getcwd))
#t)))))
(add-before 'build 'patch-test-paths
(lambda* (#:key inputs #:allow-other-keys)
(let* ((coreutils (assoc-ref inputs "coreutils"))
(cat (string-append coreutils "/bin/cat"))
(pwd (string-append coreutils "/bin/pwd"))
(true (string-append coreutils "/bin/true"))
(false (string-append coreutils "/bin/false")))
(substitute* '("tests/inittests"
"tests/pkits/inittests"
"tests/Makefile"
"tests/pkits/common.sh"
"tests/pkits/Makefile"
)
(("/bin/pwd") pwd))
(substitute* "common/t-exectool.c"
(("/bin/cat") cat))
(substitute* "common/t-exectool.c"
(("/bin/true") true))
(substitute* "common/t-exectool.c"
(("/bin/false") false))
#t))))))
(home-page "https://gnupg.org/")
(synopsis "GNU Privacy Guard")
(description

101
gnu/packages/gnuzilla.scm
View File

@ -152,7 +152,7 @@ in C/C++.")
(define-public nspr
(package
(name "nspr")
(version "4.12")
(version "4.13.1")
(source (origin
(method url-fetch)
(uri (string-append
@ -160,7 +160,7 @@ in C/C++.")
version "/src/nspr-" version ".tar.gz"))
(sha256
(base32
"1pk98bmc5xzbl62q5wf2d6mryf0v95z6rsmxz27nclwiaqg0mcg0"))))
"1arkg08l6zlp8v44shqbk2c8qzwd913lgh60fb3yfxls6d8ifk2y"))))
(build-system gnu-build-system)
(native-inputs
`(("perl" ,perl)))
@ -186,7 +186,7 @@ in the Mozilla clients.")
(define-public nss
(package
(name "nss")
(version "3.27.1")
(version "3.29.2")
(source (origin
(method url-fetch)
(uri (let ((version-with-underscores
@ -197,7 +197,7 @@ in the Mozilla clients.")
"nss-" version ".tar.gz")))
(sha256
(base32
"0sraxk26swlgl7rl742rkfp5k251v5z3lqw9k8ikin0cjfhkfdpx"))
"149807rmzb76hnh48rw4m9jw83iw0168njzchz0hmbsgc8mk0i5w"))
;; Create nss.pc and nss-config.
(patches (search-patches "nss-pkgconfig.patch"))))
(build-system gnu-build-system)
@ -303,7 +303,7 @@ standards.")
(define-public icecat
(package
(name "icecat")
(version "45.5.1-gnu1")
(version "45.7.0-gnu1")
(source
(origin
(method url-fetch)
@ -312,68 +312,43 @@ standards.")
"/" name "-" version ".tar.bz2"))
(sha256
(base32
"1sbfgsibmb8wfmb2g40gmqwq3nikmrgzksf51ydrz7gnafyfaqw1"))
"1mn73liylqzxk441f28wk326yglqs8zcwqs4zz51s8i2id2jsnv3"))
(patches
(list
(search-patch "icecat-avoid-bundled-libraries.patch")
(search-patch "icecat-binutils.patch")
(mozilla-patch "icecat-CVE-2016-9897.patch" "2e5438a92617" "0pyjbzyy04759ldpcar8q8cccv67j1jkxsg46rkq7a3rbhmwmw4p")
(mozilla-patch "icecat-CVE-2016-9899.patch" "7391f60fb790" "1hydggpmmm2cs9lb15micnkxn4wl4cda9g74hkn3zmks805vjz3h")
(mozilla-patch "icecat-CVE-2016-9893-pt1.patch" "744e01001e6e" "0z2fq765kap3ll9as5rvjpnbj3pw26074alw7df0zi215qz47nxr")
(mozilla-patch "icecat-CVE-2016-9904-pt1.patch" "8ae673f34a5b" "1rlbihckl9afa0y91lqs7gpnv6a7zxzrmxjv95y3yrl03kibqp76")
(mozilla-patch "icecat-CVE-2016-9904-pt2.patch" "409c23c144fe" "05kgs16y8s5pxmg2dxp93247zagnj6zgj3209qpm5hz3an7gr13h")
(mozilla-patch "icecat-CVE-2016-9900.patch" "994d9bd0e28d" "007wifyx3b2ln4fwv1i8n24yz5ngjf4mkzd7sqr5bpd3q88ff293")
(mozilla-patch "icecat-CVE-2016-9893-pt2.patch" "0fc43af8982e" "0pc8q9knzq2knj723mwkay1lnzbzysb07ygxnc16mcb6f7vl2mw8")
(mozilla-patch "icecat-CVE-2016-9893-pt3.patch" "19f9a4643d77" "0w5yxj1l0hvs66q9agjp4m5sfby7fj05lx33gaqf899bw4hn4vcf")
(mozilla-patch "icecat-CVE-2016-9893-pt4.patch" "c58442c414f5" "1z1w1v8xagkhrwgp51ij1k2gx0ripslia09vm78812n7gcwddaas")
(mozilla-patch "icecat-CVE-2016-9898.patch" "5054047b7328" "0xlw8irymfp3bcaa5jpf7clf7bq6qxp3i8zapp8jya8lzr1nf868")
(mozilla-patch "icecat-bug-881832-pt1.patch" "1123263318a3" "1qkxwva3zrcs1zhga8ncmndq03988dx75i896g53gbvpskj06915")
(mozilla-patch "icecat-bug-881832-pt2.patch" "dc87c0a39adf" "01rapf14f3r2wk0cjd16dn1rll4ipgs33cnjmjck48nvk67ikz6h")
(mozilla-patch "icecat-bug-881832-pt3.patch" "f20e5f488368" "15ql9ywifb3gm2g1057k63f821dbs3wqsh3zhndprzf3dn6aha4i")
(mozilla-patch "icecat-bug-881832-pt4.patch" "7950c4d5bd7c" "0jhkg5hq5yfy7rh21k1mpbsbr81ql85aazym30zy3n2cf28xxhd7")
(mozilla-patch "icecat-bug-881832-pt5.patch" "972734ec21b6" "073i4v1f1ydy49i57pvzscz95sjr5bbk9s5sajxvmmcsmwhpjdfy")
(mozilla-patch "icecat-CVE-2016-9905-pt1.patch" "aebd3687e05e" "1qz6hdgflcrqyg7fv66cbg23v4b7q5bc2yxzrgjxs4j1d7jy1s0s")
(mozilla-patch "icecat-CVE-2016-9905-pt2.patch" "63d8e5cd27cb" "11fsgyngy7v59ma30xdbmycwf4izwikzvaljngm3ks4534inpl4a")
(mozilla-patch "icecat-bug-1279202.patch" "e560997291af" "1hn35slasfcj3ryka4fsarx4l9r99z0iwj67fmbv6zxz4z133kks")
(mozilla-patch "icecat-CVE-2016-9902.patch" "21c615b65048" "0ibgsxa36x9ajn2jqbhxxvrfvj6x6iyspsmzzn4brdz11n93skhr")
(mozilla-patch "icecat-CVE-2016-9901.patch" "c15e5afc0430" "17gj32agqs94548z8lvz0l6zz3kbwajn8as0y4iw5nb6jsll4c66")
(mozilla-patch "icecat-CVE-2016-9893-pt5.patch" "46163fb1cb34" "1yikayczfgfla3aka0159apq3149d52sgvlca0sivx4myd0lvjm7")
(mozilla-patch "icecat-CVE-2016-9893-pt6.patch" "cde2a37100f5" "100abggnhwyw84almxrkxqfpyfkd4pqkcrh5y9g4d3jd2h16asvl")
(mozilla-patch "icecat-CVE-2016-9893-pt7.patch" "9b78ab1e6d07" "19ib6bp96xk000ll40b8qxvizkncyzclz2rsb9w5fa42qs9978ff")
(mozilla-patch "icecat-CVE-2016-9893-pt8.patch" "78ebf9c9dfb0" "1shgr4rk6r2zxr1qqk1j3qnnqzqxnbi093qhlrfh8q5q1ivqf6k1")
(mozilla-patch "icecat-CVE-2016-9893-pt9.patch" "a46a9f16823c" "0dwkyz3kcqnfcbhbfh2lss7s0yh87rgzb871qxx3x4ynyqph9mnz")
(mozilla-patch "icecat-CVE-2017-5376.patch" "6bc7cc7a33a6" "1wggcqv84n8mp7xps7hy4rwy61fkh45imfqzc0b46s3w5hyhypn2")
(mozilla-patch "icecat-CVE-2016-9893-pt10.patch" "778f65148b40" "0j2a153sk0654vv2lnxjib4lwml3mlqn6vs46c2pp82iba8nyfrm")
(mozilla-patch "icecat-CVE-2016-9895.patch" "94bd2b43c766" "10h0qpr6m9cqyqxxnkbb6mzb3cagavzlynkxgd7a4izyq1bv28rk")
(mozilla-patch "icecat-CVE-2016-9893-pt11.patch" "893de7431d51" "11gyik8mwipl6ipypkvdq519pw7ccbg0g0bnvxb7271n44cqqcq5")
(mozilla-patch "icecat-CVE-2017-5383-pt1.patch" "b21dee058b2c" "005khpimffqzas7slajid4dd2c15nyk7rjk6fsps87bgnx0gx0s4")
(mozilla-patch "icecat-bug-1258410-pt1.patch" "cd23c5d74be8" "1myzkpzg6pmjacjz8az06m9kz84in1mwsiaw5sgx47pm02598wm5")
(mozilla-patch "icecat-bug-1258410-pt2.patch" "b83594617d15" "171cqflc9jh47az96im1whwhyq4ayicspqsczsmn2x5ll9lqw5fq")
(mozilla-patch "icecat-CVE-2017-5380.patch" "d6c6f5e4e641" "10x9f46ylm2q3i669hj1csd6agdm8w7xa0iln691z8ayg2hcrxdz")
(mozilla-patch "icecat-CVE-2017-5373-pt1.patch" "122f5fbfc563" "05pp2f4pg4j8a8pdgjhfrc8g2chhkhsarn9n8sbyag0fy3ig1cvd")
(mozilla-patch "icecat-CVE-2017-5390.patch" "297c675ddadc" "1jc1b5i69vq1fvz3qfnnv52c9cj17bjbmfyzmqlw5ywna0wfvabz")
(mozilla-patch "icecat-CVE-2017-5373-pt2.patch" "3cff736e3bb6" "1nxqwnl9zksvkfkmis7zica4xrhwfndjyy2sxc1dvrh9rshk1swq")
(mozilla-patch "icecat-CVE-2017-5373-pt3.patch" "2732280adabc" "0zrpq3aybaw2yy38vs6883a4nw01x4kxn3lfqn9yhcgjvngmmyia")
(mozilla-patch "icecat-CVE-2017-5373-pt4.patch" "81c9fdbd96e8" "0scv1zyi4vbsjdsyj4w70n5jd50baq0dzw3qpxqf1n69nfb9k214")
(mozilla-patch "icecat-CVE-2017-5373-pt5.patch" "a386ca6a3013" "1m1scz2pxzmg9wya8is5dcr3mgvkx3g1xlykgigmw2mqs5zcdg9s")
(mozilla-patch "icecat-CVE-2017-5373-pt6.patch" "0521b0e4707c" "1mv057p4hcvapibpbd9apryag19aiqdzafc6df2angl97m4mcbjx")
(mozilla-patch "icecat-bug-1290037.patch" "bf0dd9ae6807" "02iw5ngsvvij95arnn69a744d6si27g1x41ixg16l51dbn900b3r")
(mozilla-patch "icecat-bug-1322666.patch" "576f03e362c5" "0m88xs0jwhzx2lg12cvimxjknp7rpsvvhxxblhiqqjwnqip0pyc0")
(mozilla-patch "icecat-bug-1304266.patch" "4d82e7314a72" "1rrrw4rw0xv7c2myiypcqh1fk47rk3fvic79zh6m04bl3knclr1r")
(mozilla-patch "icecat-CVE-2017-5373-pt7.patch" "0617dd4b444d" "1ipags2cl2p521pm0qx110h5di2mgif6h1r3g8l9b0rc5m9b1y2j")
(mozilla-patch "icecat-CVE-2017-5375.patch" "ead08c2a6c57" "1nnnwdr7411xpz6n9j869g6sz447cq6xsmds9cw6d24iprcinp5m")
(mozilla-patch "icecat-CVE-2017-5378-pt1.patch" "c5e67d41bdd0" "05kwn5zv381lsiw9vbzm8fh6s1lddx47l8f4pwg487h9dj7vbdfq")
(mozilla-patch "icecat-CVE-2017-5373-pt8.patch" "2ce94f2ea797" "1yrnjqpafjns68z99s1m6jins3agid7c1z3v9qgk5xzfcddl31pn")
(mozilla-patch "icecat-CVE-2017-5373-pt9.patch" "e4ac8a66d3db" "1ggbh6nk005plm7kvp7qznbnlpidqkipxc5hlaqbjc3m0z9mypzl")
(mozilla-patch "icecat-CVE-2017-5386.patch" "8c171b75a0c6" "1cplkgwkhqvb62q7s8cya2drjdswnlicv5d9a60fxvnp6m7a3z02")
(mozilla-patch "icecat-CVE-2017-5383-pt2.patch" "79a31d8153bf" "0dzwk2hc741c0jr8xya4y8q59lk8mcgnvfdrdk0vzq1gby16b9zi")
(mozilla-patch "icecat-CVE-2017-5378-pt2.patch" "747085a1cd93" "0rpc8hl0jka4akdjnlwya4x9v4pqa1r5vc4pkmxsgvqpp2vkq4m2")
(mozilla-patch "icecat-bug-1331606.patch" "f0329536734b" "1br5shyfwp009y623wgjq60vhcp5k5zpzkgy4r3s5yrm5xyfcprf")
(mozilla-patch "icecat-bug-1328642.patch" "237c1ca6e035" "0808g5j17var6wv6ivj08i43fwkga9abmmgmz5w3hb8mhajkjw58")
(mozilla-patch "icecat-CVE-2017-5396.patch" "910ad552cbf5" "1qss3gc6n4myzwvwanc09xvyiq3hwhixn2xvpbk9xkfz2apdlfa6")
(mozilla-patch "icecat-bug-1312827.patch" "5c894801eb1e" "03xyjwx9rfx5w7q6wq9if83fcfgrlvvbyxpsawzxxgybnizyy7g8")
(mozilla-patch "icecat-bug-1191841.patch" "83ee87b301bd" "1kd9z4py372a2f1jg7jwvwri43vipf0k7lcvsg7b0cqr5p70zwcg")
(mozilla-patch "icecat-bug-1234317.patch" "eb6f18dbfe8d" "1dh3263fvg3dxav09g6fn41ax4q1jmwp5fk6pl6shn16mrfha1qq")))
(mozilla-patch "icecat-CVE-2017-5398-pt01.patch" "1a39a54b5fea" "0k3sbf2w2yng2rpv6wl9zrm5cbsgq3pslr19xwrk8sk753as79fp")
(mozilla-patch "icecat-CVE-2017-5402.patch" "9828c3bb7b73" "0zgks0v9sqhwwkmry4daswvjwk6aqln6abx0iac1vwqqpg6swff6")
(mozilla-patch "icecat-CVE-2017-5398-pt02.patch" "fa3268a1147e" "1jyd1hvp42pz5l15agmb1jhw74b38x8xnj9ih5v4pskv41bgmyg5")
(mozilla-patch "icecat-CVE-2017-5400.patch" "347c10e4d6d1" "1w6yrm97l477q4ripbj0nimc87p4jscabvihpncxqbq9xzc4km7p")
(mozilla-patch "icecat-CVE-2017-5410.patch" "fe4a2cda54ad" "0spcs93hpz13d8670jgvww80f0ynrbhwbh62fkv27lpr6wmqwqh1")
(mozilla-patch "icecat-CVE-2017-5401.patch" "c38f8546be5f" "1sa22w9kzgynsn4c6zh4d66byskk5kffzbvlzrhyzvqjddypf9p8")
(mozilla-patch "icecat-CVE-2017-5398-pt03.patch" "41c80ecafa99" "0r33arr5wcgl00zgncasiyl65bmm6jy45clxnbb75nzjmsd1zx1s")
(mozilla-patch "icecat-CVE-2017-5405.patch" "381552c888b4" "1sjhh390cx1jqx74lxk6qd8f8ccppqgagqfhc9pnbm2m67hxvkj9")
(mozilla-patch "icecat-CVE-2017-5407.patch" "4ba337cdb998" "0vyknizid2z9nvl31m08c7fknizhv8dh8m54apm39k8lx77vf70p")
(mozilla-patch "icecat-CVE-2017-5398-pt04.patch" "886650fac531" "18fsr5dmav96ja0dah7mj34n8mjpckp0bbc32zjyaj5qx0m4h5cw")
(mozilla-patch "icecat-CVE-2017-5409.patch" "0a22becb23cd" "19fshrq4qkj5s0mjrads6by84gy7rsq3k57gha6sw6rvx8chjaz6")
(mozilla-patch "icecat-CVE-2017-5398-pt05.patch" "a0ead6ef09eb" "1hpsq81hhhq2a2dcq2dfndiwx93vvp5rfq0cgv6kwk2bsrq77wqq")
(mozilla-patch "icecat-CVE-2017-5398-pt06.patch" "d3fede027d06" "1aw02p367cm0ayijdiiawlb7qhab6jwqwkakj317yd1cjnmkalwr")
(mozilla-patch "icecat-CVE-2017-5398-pt07.patch" "ffca0f060bb4" "0qwisfp7idjj5nc1vp1afrf5lj66l2gp7rllkjmrqpz6cyfc708v")
(mozilla-patch "icecat-CVE-2017-5398-pt08.patch" "4aa65b44dcb9" "07j6dz2b7hp1bkfvkxwgpn2wc3hqrgjgwpaz96fcpz8yadg2fssw")
(mozilla-patch "icecat-bug-1318914.patch" "30e2382d800f" "0w8zky5i7zc5q943x37rdvi4wbcing0q7w9fcgvnnh5li2sbrsy8")
(mozilla-patch "icecat-CVE-2017-5408.patch" "403d2300adc2" "06r4j48rc1fd9gvmvqy68mlqah5xfxpkvwmxk0gnqc364kpq9slk")
(mozilla-patch "icecat-CVE-2017-5398-pt09.patch" "546ab5e99568" "05rdb9bm3n4lj0zq5a95xnwsb0vzirb9mbc2wf9xbi4xlamsgvvw")
(mozilla-patch "icecat-bug-1311380.patch" "ef6eeb7f8846" "1w19is5blbrwf3wlmy6wzgabih8sxp2kmkffqcj2g4jypfwyqn73")
(mozilla-patch "icecat-CVE-2017-5398-pt10.patch" "eec69810d80e" "1r20abhw7b38igsrdpkhcfwx9i9gmcxikv4y3sjr4wkbp684f7av")
(mozilla-patch "icecat-CVE-2017-5398-pt11.patch" "fec35ce6e68b" "1imdfrs8dxz44rhsmvydh29w5j64cij6g5ggrmhvz3386xvlil2v")
(mozilla-patch "icecat-CVE-2017-5398-pt12.patch" "725e2a217722" "06gfhi2ich279rjnxi15fb4igimsxnv5w6bx4g91js8wbvp2r3v0")
(mozilla-patch "icecat-CVE-2017-5398-pt13.patch" "d905a2e3a4d9" "1ibxi2s0czj47b739zmmjzbln8lpn27hdg4b17w58vhbhzkq31cx")
(mozilla-patch "icecat-CVE-2017-5398-pt14.patch" "0032560ae945" "0md3p5cix6nzbj5m199awc9gk52pygy5s9lx3a38vh3xvd92lsbj")
(mozilla-patch "icecat-CVE-2017-5398-pt15.patch" "91dda1e79ad8" "0b5h8fhagczfqkdgby982w6qgkw9y11zxxpdbn89rwmjpyp9nghx")
(mozilla-patch "icecat-CVE-2017-5404.patch" "556dd9e4a9e3" "0mbdx4xn1xs67n47ys9m42lc5ny96rz21ala848yajpdlxsz680g")
(mozilla-patch "icecat-bug-1341137-pt1.patch" "e86e0423dad1" "0dk1v7lcs61nx76qxcibha3ygqri15ldcvwwsrsayff9fq6k0v4y")
(mozilla-patch "icecat-bug-1341137-pt2.patch" "9aebee8b8cb9" "0m7p5iprhhwdv89aqqg7fla5szw6v7x2sll4ns0zg60pk4vm6izq")
(mozilla-patch "icecat-bug-1341137-pt3.patch" "69f3d44bdb48" "1ad7rw6nmg3c49ylqxlqqkb6cm2f0ygfzrigs6b60a2zkjqhbl0h")
(mozilla-patch "icecat-bug-1341137-pt4.patch" "22546e2cee64" "0gbwxa3p7qkq53hwnvxcqhx8h34qmnjdxy0h3ajik4mw76vrna9s")
(mozilla-patch "icecat-bug-1341137-pt5.patch" "e5083d8a855a" "1247vbpqzf007nigbxxqd6nwgr1dxd4p8cd0dr45afqh19vhlapj")
(mozilla-patch "icecat-bug-1339122.patch" "b0d156c7445e" "026jp5bb565yvhkmmicgygcn1lmak85p0466yl1vnjlx1rc8n724")))
(modules '((guix build utils)))
(snippet
'(begin

34
gnu/packages/gstreamer.scm
View File

@ -98,7 +98,7 @@ arrays of data.")
(define-public gstreamer
(package
(name "gstreamer")
(version "1.10.3")
(version "1.10.4")
(source
(origin
(method url-fetch)
@ -107,7 +107,7 @@ arrays of data.")
version ".tar.xz"))
(sha256
(base32
"0gdnxg5igbhnpjhrzp31w1ww95j805byqd6mj3x29wli54dxrfc5"))))
"062jidnw17hkpva6ddygp80gyasyigfkpm1y7w56rk56a2pzbhjh"))))
(build-system gnu-build-system)
(outputs '("out" "doc"))
(arguments
@ -146,7 +146,7 @@ This package provides the core library and elements.")
(define-public gst-plugins-base
(package
(name "gst-plugins-base")
(version "1.10.3")
(version "1.10.4")
(source
(origin
(method url-fetch)
@ -154,9 +154,11 @@ This package provides the core library and elements.")
name "-" version ".tar.xz"))
(sha256
(base32
"040pifl4cgsqqz2si4s1y5khj3zwm39w21siagxwp805swbrcag6"))
(patches
(search-patches "gst-plugins-base-fix-test-on-32bit.patch"))))
"1dsyjf6rncsbg4rfj40cvf1wwpjj9h3j3c7bh4zp7jylnfv4blpn"))
; (patches
; (search-patches "gst-plugins-base-fix-test-on-32bit.patch"))
))
(build-system gnu-build-system)
(outputs '("out" "doc"))
(propagated-inputs
@ -203,7 +205,7 @@ for the GStreamer multimedia library.")
(define-public gst-plugins-good
(package
(name "gst-plugins-good")
(version "1.10.3")
(version "1.10.4")
(source
(origin
(method url-fetch)
@ -212,7 +214,7 @@ for the GStreamer multimedia library.")
name "-" version ".tar.xz"))
(sha256
(base32
"0mar8ss8bvpz699ql4kgndvna8qsv7kj372py4435ffl6hzfj1sf"))))
"0zjdwxn83sp9wjp9rxjbyk8kf284g9av7l2v6rjldi586hacd1la"))))
(build-system gnu-build-system)
(inputs
`(("aalib" ,aalib)
@ -268,14 +270,14 @@ developers consider to have good quality code and correct functionality.")
(define-public gst-plugins-bad
(package
(name "gst-plugins-bad")
(version "1.10.3")
(version "1.10.4")
(source (origin
(method url-fetch)
(uri (string-append "https://gstreamer.freedesktop.org/src/"
name "/" name "-" version ".tar.xz"))
(sha256
(base32
"1rwla1p57yzygb68z2xk5l5kvqzj5w3nxq0davkwk139zd8r6294"))))
"0rk9rlzf2b0hjw5hwbadz53yh4ls7vm3w3cshsa3n8isdd8axp93"))))
(outputs '("out" "doc"))
(build-system gnu-build-system)
(arguments
@ -345,7 +347,7 @@ par compared to the rest.")
(define-public gst-plugins-ugly
(package
(name "gst-plugins-ugly")
(version "1.10.3")
(version "1.10.4")
(source
(origin
(method url-fetch)
@ -353,7 +355,7 @@ par compared to the rest.")
name "/" name "-" version ".tar.xz"))
(sha256
(base32
"1lkb8kznc9wxmhbp7k67b50y27nz8jp2x2flb91xzydz7b89f5f9"))))
"0ngsiwcsz3jd08id4mc0qiy2q1n7h2kkvdnh3r1vm725m1ycg1k3"))))
(build-system gnu-build-system)
(inputs
`(("gst-plugins-base" ,gst-plugins-base)
@ -384,7 +386,7 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
(define-public gst-libav
(package
(name "gst-libav")
(version "1.10.3")
(version "1.10.4")
(source (origin
(method url-fetch)
(uri (string-append
@ -392,7 +394,7 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
name "-" version ".tar.xz"))
(sha256
(base32
"1aajayv63ardkbmcg7pnh2d87r067325a5wzinwihaw6n5jw2sws"))))
"12r68ri03mgbbwsxyn6yklgfsq32rwvyq83zw0aq7m73fp5gx83c"))))
(build-system gnu-build-system)
(arguments
'(#:configure-flags '("--with-system-libav")
@ -422,7 +424,7 @@ compression formats through the use of the libav library.")
(define-public python-gst
(package
(name "python-gst")
(version "1.10.3")
(version "1.10.4")
(source (origin
(method url-fetch)
(uri (string-append
@ -430,7 +432,7 @@ compression formats through the use of the libav library.")
"gst-python-" version ".tar.xz"))
(sha256
(base32
"1s5437bnk0j5hfg2gwfwq4b68l6vj1lfskxh73v6ikp0vw32vymx"))))
"04l2hvvz9b0f3nyds1k3yfk5di8a91fpr6maj19c11mwp1s82l2r"))))
(build-system gnu-build-system)
(arguments
;; XXX: Factorize python-sitedir with python-build-system.

69
gnu/packages/guile.scm
View File

@ -10,6 +10,7 @@
;;; Copyright © 2016 Adonay "adfeno" Felipe Nogueira <https://libreplanet.org/wiki/User:Adfeno> <adfeno@openmailbox.org>
;;; Copyright © 2016 Amirouche <amirouche@hypermove.net>
;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2017 Andy Wingo <wingo@igalia.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -219,7 +220,7 @@ without requiring the source code to be rewritten.")
(define-public guile-next
(package (inherit guile-2.0)
(name "guile-next")
(version "2.1.5")
(version "2.1.7")
(replacement #f)
(source (origin
(method url-fetch)
@ -227,7 +228,7 @@ without requiring the source code to be rewritten.")
version ".tar.xz"))
(sha256
(base32
"0r9y4hw17dlxahik4zsccfb2f3p2a07wqndfm251bgmam9hln6gi"))
"0qf2664bglv5rrj4c99cc7gry7v9x0sqdyzgfg8zi8gm5wbcmqda"))
(modules '((guix build utils)))
;; Remove the pre-built object files. Instead, build everything
@ -428,22 +429,18 @@ more.")
(define-public guile-reader
(package
(name "guile-reader")
(version "0.6.1")
(version "0.6.2")
(source (origin
(method url-fetch)
(uri (string-append "mirror://savannah/guile-reader/guile-reader-"
version ".tar.gz"))
(sha256
(base32
"020wz5w8z6g79nbqifg2n496wxwkcjzh8xizpv6mz0hczpl155ma"))))
"0592s2s8ampqmqwilc4fvcild6rb9gy79di6vxv5kcdmv23abkgx"))))
(build-system gnu-build-system)
(native-inputs `(("pkgconfig" ,pkg-config)
("gperf" ,gperf)))
(inputs `(("guile" ,guile-2.0)))
(arguments `(#:configure-flags
(let ((out (assoc-ref %outputs "out")))
(list (string-append "--with-guilemoduledir="
out "/share/guile/site/2.0")))))
(synopsis "Framework for building readers for GNU Guile")
(description
"Guile-Reader is a simple framework for building readers for GNU Guile.
@ -460,6 +457,9 @@ many readers as needed).")
(home-page "http://www.nongnu.org/guile-reader/")
(license license:gpl3+)))
(define-public guile2.2-reader
(package-for-guile-2.2 guile-reader))
(define-public guile-ncurses
(package
(name "guile-ncurses")
@ -617,17 +617,20 @@ The library is shipped with documentation in Info format and usage examples.")
(define-public guile-lib
(package
(name "guile-lib")
(version "0.2.3")
(version "0.2.5")
(source (origin
(method url-fetch)
(uri (string-append "mirror://savannah/guile-lib/guile-lib-"
version ".tar.gz"))
(sha256
(base32
"0pwdd52vakni1fabaiav8v0ad7xp3bx8x3brijbr1mpgamm9dxqc"))))
"1qbk485djgxqrbfjvk4b7w7y4x9xygf2qb8dqnl7885kajasx8qg"))))
(build-system gnu-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
'(#:make-flags
'("GUILE_AUTO_COMPILE=0") ;to prevent guild errors
#:phases
(modify-phases %standard-phases
(add-before 'configure 'patch-module-dir
(lambda _
(substitute* "src/Makefile.in"
@ -636,13 +639,7 @@ The library is shipped with documentation in Info format and usage examples.")
(("^godir = ([[:graph:]]+)")
"godir = \
$(libdir)/guile/@GUILE_EFFECTIVE_VERSION@/site-ccache\n"))
#t))
(replace 'check
(lambda _
;; Work around a harmless test failure involving
;; two-spaces-after-period rendering.
(zero? (system* "make" "check" ;"-C" "unit-tests"
"XFAIL_TESTS=texinfo.serialize.scm")))))))
#t)))))
(native-inputs `(("pkg-config" ,pkg-config)))
(inputs `(("guile" ,guile-2.0)))
(home-page "http://www.nongnu.org/guile-lib/")
@ -1052,6 +1049,10 @@ interface for reading articles in any format.")
(home-page "http://haunt.dthompson.us")
(license license:gpl3+)))
(define-public guile2.2-haunt
(package-for-guile-2.2
(package (inherit haunt) (name "guile2.2-haunt"))))
(define-public guile-config
(package
(name "guile-config")
@ -1641,6 +1642,38 @@ library for GNU Guile based on the actor model.
Note that 8sync is only available for Guile 2.2 (guile-next in Guix).")
(license license:lgpl3+)))
(define-public guile-fibers
(package
(name "guile-fibers")
(version "1.0.0")
(source (origin
(method url-fetch)
(uri (string-append "https://wingolog.org/pub/fibers/fibers-"
version ".tar.gz"))
(sha256
(base32
"0vjkg72ghgdgphzbjz9ig8al8271rq8974viknb2r1rg4lz92ld0"))))
(build-system gnu-build-system)
(native-inputs
`(("texinfo" ,texinfo)
("pkg-config" ,pkg-config)))
(inputs
`(("guile" ,guile-next)))
(synopsis "Lightweight concurrency facility for Guile")
(description
"Fibers is a Guile library that implements a a lightweight concurrency
facility, inspired by systems like Concurrent ML, Go, and Erlang. A fiber is
like a \"goroutine\" from the Go language: a lightweight thread-like
abstraction. Systems built with Fibers can scale up to millions of concurrent
fibers, tens of thousands of concurrent socket connections, and many parallel
cores. The Fibers library also provides Concurrent ML-like channels for
communication between fibers.
Note that Fibers makes use of some Guile 2.1/2.2-specific features and
is not available for Guile 2.0.")
(home-page "https://github.com/wingo/fibers")
(license license:lgpl3+)))
(define-public guile-git
(let ((revision "0")
(commit "969514aa7224217bc3c1a4c5312a9469ac5f13d5"))

24
gnu/packages/image-viewers.scm
View File

@ -43,7 +43,7 @@
(define-public feh
(package
(name "feh")
(version "2.18")
(version "2.18.2")
(home-page "https://feh.finalrewind.org/")
(source (origin
(method url-fetch)
@ -51,7 +51,7 @@
name "-" version ".tar.bz2"))
(sha256
(base32
"036lgv81d0vmrnmh1z1x360nr5avb2sk5jb1h3g5n6jijm8vzblx"))))
"09f5rfzls4h5jcrp7ylwbiljp5qzc2nbw9p2csv0pnlaixj69gil"))))
(build-system gnu-build-system)
(arguments
'(#:phases (alist-delete 'configure %standard-phases)
@ -212,7 +212,7 @@ your images. Among its features are:
(define-public catimg
(package
(name "catimg")
(version "2.2.1")
(version "2.2.2")
(source
(origin
(method url-fetch)
@ -221,10 +221,10 @@ your images. Among its features are:
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"14g90zwh2d3s13hgyxypx2vc0rj1g58l6zcxhgc84wsyxfxd6xpb"))))
"1abkhrhw4r221lwn2vb8in3vmp6gxn3qlv34cqndr55v5gdpb9qz"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; No check target
`(#:tests? #f ; no tests
#:phases
(modify-phases %standard-phases
(replace 'configure
@ -240,14 +240,16 @@ your images. Among its features are:
#t)))
(replace 'build
(lambda _
(zero? (system* "cmake" "-D"
(string-append "CMAKE_INSTALL_PREFIX="
(assoc-ref %outputs "out"))
(let* ((out (assoc-ref %outputs "out"))
(man (string-append out "/share/man/man1")))
(zero? (system* "cmake"
(string-append "-DCMAKE_INSTALL_PREFIX=" out)
(string-append "-DMAN_OUTPUT_PATH=" man)
"."))
(zero? (system* "make"))))
(zero? (system* "make")))))
(add-before 'install 'install-script
(lambda* (#:key outputs #:allow-other-keys)
;; The bashscript lacks an file extension, we have to rename
;; The bash script lacks an file extension. We have to rename
;; it so that the C program and the bash script can be happy
;; side by side.
(let* ((out (assoc-ref outputs "out"))
@ -257,7 +259,7 @@ your images. Among its features are:
(string-append bin "/catimg.sh"))
#t))))))
(inputs
`(("imagemagick" ,imagemagick))) ; For the bash script version
`(("imagemagick" ,imagemagick))) ; for the bash script version
(home-page "https://github.com/posva/catimg")
(synopsis "Render images in the terminal")
(description

4
gnu/packages/image.scm
View File

@ -868,14 +868,14 @@ convert, manipulate, filter and display a wide variety of image formats.")
(define-public jasper
(package
(name "jasper")
(version "2.0.10")
(version "2.0.12")
(source (origin
(method url-fetch)
(uri (string-append "https://www.ece.uvic.ca/~frodo/jasper"
"/software/jasper-" version ".tar.gz"))
(sha256
(base32
"1s022mfxyw8jw60fgyj60lbm9h6bc4nk2751b0in8qsjwcl59n2l"))))
"1njdbxv7d4anzrd476wjww2qsi96dd8vfnp4hri0srrqxpszl92v"))))
(build-system cmake-build-system)
(inputs `(("libjpeg" ,libjpeg)))
(synopsis "JPEG-2000 library")

13
gnu/packages/imagemagick.scm
View File

@ -46,14 +46,14 @@
;; The 7 release series has an incompatible API, while the 6 series is still
;; maintained. Don't update to 7 until we've made sure that the ImageMagick
;; users are ready for the 7-series API.
(version "6.9.7-7")
(version "6.9.7-9")
(source (origin
(method url-fetch)
(uri (string-append "mirror://imagemagick/ImageMagick-"
version ".tar.xz"))
(sha256
(base32
"02x463z31j449pfm8czb7jlpkd3nx4a3yyjxq3bhpjfq13i20d62"))))
"1fqvi6h96mfbyw292awiwsqs449sjmw6i9ib53c66nnq1zchw7l3"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--with-frozenpaths" "--without-gcc-arch")
@ -162,11 +162,12 @@ script.")
(license (package-license imagemagick))))
(define-public graphicsmagick
(let ((changeset "56c8cae") ; 3e01b
(revision "1"))
(let ((changeset "6156b4c2992d855ece6079653b3b93c3229fc4b8") ; fix CVE-2017-6335
(revision "2"))
(package
(name "graphicsmagick")
(version (string-append "1.3.25-" revision "." changeset))
(version (string-append "1.3.25-" revision "."
(string-take changeset 7)))
(source (origin
(method hg-fetch)
(uri (hg-reference
@ -179,7 +180,7 @@ script.")
;; "/GraphicsMagick-" version ".tar.xz"))
(sha256
(base32
"1s9apvkn0kxr6i4i5wlkfw1prja02rgk689n3cf822zc0dkycxdh"))))
"08yfsn8mrqkwpax43vv1crfr55rcf004wwpzsinr5c6m0asqr08b"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags

446
gnu/packages/java.scm
View File

@ -1,7 +1,8 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2016 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
;;; Copyright © 2016, 2017 Roel Janssen <roel@gnu.org>
;;; Copyright © 2017 Carlo Zancanaro <carlo@zancanaro.id.au>
;;;
;;; This file is part of GNU Guix.
;;;
@ -334,18 +335,26 @@ and is best suited to building Java projects. Ant uses XML to describe the
build process and its dependencies, whereas Make uses Makefile format.")
(license license:asl2.0)))
(define-public icedtea-6
(define-public icedtea-7
(let* ((version "2.6.9")
(drop (lambda (name hash)
(origin
(method url-fetch)
(uri (string-append
"http://icedtea.classpath.org/download/drops/"
"/icedtea7/" version "/" name ".tar.bz2"))
(sha256 (base32 hash))))))
(package
(name "icedtea")
(version "1.13.13")
(version version)
(source (origin
(method url-fetch)
(uri (string-append
"http://icedtea.wildebeest.org/download/source/icedtea6-"
"http://icedtea.wildebeest.org/download/source/icedtea-"
version ".tar.xz"))
(sha256
(base32
"0bg9sb4f7qbq77c0zf9m17p47ga0kf0r9622g9p12ysg26jd1ksg"))
"1slmajiakq7sk137vgqq9c93r5s620a46lw2jwbnzxhysjw3wkwf"))
(modules '((guix build utils)))
(snippet
'(substitute* "Makefile.in"
@ -360,58 +369,40 @@ build process and its dependencies, whereas Make uses Makefile format.")
"jdk" ; Java Development Kit
"doc")) ; all documentation
(arguments
`(;; There are many failing tests and many are known to fail upstream.
;;
;; * Hotspot VM tests:
;; FAILED: compiler/7082949/Test7082949.java
;; FAILED: compiler/7088020/Test7088020.java
;; FAILED: runtime/6929067/Test6929067.sh
;; FAILED: serviceability/sa/jmap-hashcode/Test8028623.java
;; => Test results: passed: 161; failed: 4
;;
;; * langtools tests:
;; FAILED: com/sun/javadoc/testHtmlDefinitionListTag/TestHtmlDefinitionListTag.java
;; FAILED: tools/javac/6627362/T6627362.java
;; FAILED: tools/javac/7003595/T7003595.java
;; FAILED: tools/javac/7024568/T7024568.java
;; FAILED: tools/javap/4111861/T4111861.java
;; FAILED: tools/javap/ListTest.java
;; FAILED: tools/javap/OptionTest.java
;; FAILED: tools/javap/T4884240.java
;; FAILED: tools/javap/T4975569.java
;; --> fails because of insignificant whitespace differences
;; in output of javap
;; FAILED: tools/javap/T6868539.java
;; => Test results: passed: 1,445; failed: 10
;;
;; * JDK tests:
;; Tests are incomplete because of a segfault after this test:
;; javax/crypto/spec/RC5ParameterSpec/RC5ParameterSpecEquals.java
;; A bug report has already been filed upstream:
;; http://icedtea.classpath.org/bugzilla/show_bug.cgi?id=2188
;;
;; The tests require xvfb-run, a wrapper script around Xvfb, which
;; has not been packaged yet. Without it many AWT tests fail, so I
;; made no attempts to make a list of failing JDK tests. At least
;; 222 tests are failing of which at least 132 are AWT tests.
`(;; There are many test failures. Some are known to
;; fail upstream, others relate to not having an X
;; server running at test time, yet others are a
;; complete mystery to me.
;; hotspot: passed: 241; failed: 45; error: 2
;; langtools: passed: 1,934; failed: 26
;; jdk: unknown
#:tests? #f
;; The DSOs use $ORIGIN to refer to each other, but (guix build
;; gremlin) doesn't support it yet, so skip this phase.
#:validate-runpath? #f
;; Apparently, the C locale is needed for some of the tests.
#:locale "C"
#:modules ((guix build utils)
(guix build gnu-build-system)
(ice-9 match)
(ice-9 popen)
(ice-9 rdelim)
(srfi srfi-19))
(srfi srfi-19)
(srfi srfi-26))
#:configure-flags
(let* ((gcjdir (assoc-ref %build-inputs "gcj"))
(ecj (string-append gcjdir "/share/java/ecj.jar"))
(jdk (string-append gcjdir "/lib/jvm/"))
(gcj (string-append gcjdir "/bin/gcj")))
`("--enable-bootstrap"
;; TODO: package pcsc and sctp, and add to inputs
`("--disable-system-pcsc"
"--disable-system-sctp"
"--enable-bootstrap"
"--enable-nss"
"--without-rhino"
"--disable-downloading"
@ -422,24 +413,46 @@ build process and its dependencies, whereas Make uses Makefile format.")
,(string-append "--with-gcj=" gcj)
,(string-append "--with-jdk-home=" jdk)
,(string-append "--with-java=" jdk "/bin/java")))
#:phases
(modify-phases %standard-phases
(replace 'unpack
(lambda* (#:key source inputs #:allow-other-keys)
(and (zero? (system* "tar" "xvf" source))
(begin
(chdir (string-append "icedtea6-" ,version))
(mkdir "openjdk.src")
(let ((target (string-append "icedtea-" ,version))
(unpack (lambda* (name #:optional dir)
(let ((dir (or dir
(string-drop-right name 5))))
(mkdir dir)
(zero? (system* "tar" "xvf"
(assoc-ref inputs name)
"-C" dir
"--strip-components=1"))))))
(mkdir target)
(and
(zero? (system* "tar" "xvf" source
"-C" target "--strip-components=1"))
(chdir target)
(unpack "openjdk-src" "openjdk.src")
(with-directory-excursion "openjdk.src"
(copy-file (assoc-ref inputs "openjdk6-src")
"openjdk6-src.tar.xz")
(zero? (system* "tar" "xvf" "openjdk6-src.tar.xz")))))))
(add-after 'unpack 'patch-patches
(lambda _
;; shebang in patches so that they apply cleanly
(substitute* '("patches/jtreg-jrunscript.patch"
"patches/hotspot/hs23/drop_unlicensed_test.patch")
(("#!/bin/sh") (string-append "#!" (which "sh"))))
(for-each unpack
(filter (cut string-suffix? "-drop" <>)
(map (match-lambda
((name . _) name))
inputs))))
#t))))
(add-after 'unpack 'fix-x11-extension-include-path
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "openjdk.src/jdk/make/sun/awt/mawt.gmk"
(((string-append "\\$\\(firstword \\$\\(wildcard "
"\\$\\(OPENWIN_HOME\\)"
"/include/X11/extensions\\).*$"))
(string-append (assoc-ref inputs "libxrender")
"/include/X11/extensions"
" -I" (assoc-ref inputs "libxtst")
"/include/X11/extensions"
" -I" (assoc-ref inputs "libxinerama")
"/include/X11/extensions"))
(("\\$\\(wildcard /usr/include/X11/extensions\\)\\)") ""))
#t))
(add-after 'unpack 'patch-paths
(lambda _
@ -524,43 +537,56 @@ build process and its dependencies, whereas Make uses Makefile format.")
(("AZ=AZM;2005-12-31-20-00-00;AZN") "AZ=AZN")
(("MZ=MZM;2006-06-30-22-00-00;MZN") "MZ=MZN")
(("RO=ROL;2005-06-30-21-00-00;RON") "RO=RON")
(("TR=TRL;2004-12-31-22-00-00;TRY") "TR=TRY")))))
(("TR=TRL;2004-12-31-22-00-00;TRY") "TR=TRY")))
#t))
(add-before 'configure 'set-additional-paths
(lambda* (#:key inputs #:allow-other-keys)
(let* ((gcjdir (assoc-ref %build-inputs "gcj"))
(gcjlib (string-append gcjdir "/lib"))
;; Get target-specific include directory so that
(let ( ;; Get target-specific include directory so that
;; libgcj-config.h is found when compiling hotspot.
(gcjinclude (let* ((port (open-input-pipe "gcj -print-file-name=include"))
(str (read-line port)))
(close-pipe port)
str)))
(substitute* "openjdk.src/jdk/make/common/shared/Sanity.gmk"
(("ALSA_INCLUDE=/usr/include/alsa/version.h")
(string-append "ALSA_INCLUDE="
(assoc-ref inputs "alsa-lib")
"/include/alsa/version.h")))
(setenv "CC" "gcc")
(setenv "CPATH"
(string-append gcjinclude ":"
(assoc-ref %build-inputs "libxrender")
(assoc-ref inputs "libxcomposite")
"/include/X11/extensions" ":"
(assoc-ref %build-inputs "libxtst")
(assoc-ref inputs "libxrender")
"/include/X11/extensions" ":"
(assoc-ref %build-inputs "libxinerama")
(assoc-ref inputs "libxtst")
"/include/X11/extensions" ":"
(assoc-ref inputs "libxinerama")
"/include/X11/extensions" ":"
(or (getenv "CPATH") "")))
(setenv "ALT_OBJCOPY" (which "objcopy"))
(setenv "ALT_CUPS_HEADERS_PATH"
(string-append (assoc-ref %build-inputs "cups")
(string-append (assoc-ref inputs "cups")
"/include"))
(setenv "ALT_FREETYPE_HEADERS_PATH"
(string-append (assoc-ref %build-inputs "freetype")
(string-append (assoc-ref inputs "freetype")
"/include"))
(setenv "ALT_FREETYPE_LIB_PATH"
(string-append (assoc-ref %build-inputs "freetype")
"/lib")))))
(string-append (assoc-ref inputs "freetype")
"/lib")))
#t))
(add-before 'check 'fix-test-framework
(lambda _
;; Fix PATH in test environment
(substitute* "src/jtreg/com/sun/javatest/regtest/Main.java"
(substitute* "test/jtreg/com/sun/javatest/regtest/Main.java"
(("PATH=/bin:/usr/bin")
(string-append "PATH=" (getenv "PATH"))))
(substitute* "src/jtreg/com/sun/javatest/util/SysEnv.java"
(substitute* "test/jtreg/com/sun/javatest/util/SysEnv.java"
(("/usr/bin/env") (which "env")))
(substitute* "openjdk.src/hotspot/test/test_env.sh"
(("/bin/rm") (which "rm"))
(("/bin/cp") (which "cp"))
(("/bin/mv") (which "mv")))
#t))
(add-before 'check 'fix-hotspot-tests
(lambda _
@ -664,7 +690,8 @@ build process and its dependencies, whereas Make uses Makefile format.")
(jdk (assoc-ref outputs "jdk")))
(copy-recursively "openjdk.build/docs" doc)
(copy-recursively "openjdk.build/j2re-image" jre)
(copy-recursively "openjdk.build/j2sdk-image" jdk))))
(copy-recursively "openjdk.build/j2sdk-image" jdk))
#t))
;; By default IcedTea only generates an empty keystore. In order to
;; be able to use certificates in Java programs we need to generate a
;; keystore from a set of certificates. For convenience we use the
@ -706,7 +733,7 @@ build process and its dependencies, whereas Make uses Makefile format.")
"-file" temp)))
(display "yes\n" port)
(when (not (zero? (status:exit-val (close-pipe port))))
(error "failed to import" cert)))
(format #t "failed to import ~a\n" cert)))
(delete-file temp)))
;; This is necessary because the certificate directory contains
@ -719,6 +746,15 @@ build process and its dependencies, whereas Make uses Makefile format.")
"/lib/security"))
(mkdir-p (string-append (assoc-ref outputs "jdk")
"/jre/lib/security"))
;; The cacerts files we are going to overwrite are chmod'ed as
;; read-only (444) in icedtea-8 (which derives from this
;; package). We have to change this so we can overwrite them.
(chmod (string-append (assoc-ref outputs "out")
"/lib/security/" keystore) #o644)
(chmod (string-append (assoc-ref outputs "jdk")
"/jre/lib/security/" keystore) #o644)
(install-file keystore
(string-append (assoc-ref outputs "out")
"/lib/security"))
@ -726,204 +762,6 @@ build process and its dependencies, whereas Make uses Makefile format.")
(string-append (assoc-ref outputs "jdk")
"/jre/lib/security"))
#t))))))
(native-inputs
`(("ant" ,ant)
("alsa-lib" ,alsa-lib)
("attr" ,attr)
("autoconf" ,autoconf)
("automake" ,automake)
("coreutils" ,coreutils)
("diffutils" ,diffutils) ;for tests
("gawk" ,gawk)
("grep" ,grep)
("libtool" ,libtool)
("pkg-config" ,pkg-config)
("cups" ,cups)
("wget" ,wget)
("which" ,which)
("cpio" ,cpio)
("zip" ,zip)
("unzip" ,unzip)
("fastjar" ,fastjar)
("libxslt" ,libxslt) ;for xsltproc
("mit-krb5" ,mit-krb5)
("nss" ,nss)
("nss-certs" ,nss-certs)
("libx11" ,libx11)
("libxcomposite" ,libxcomposite)
("libxt" ,libxt)
("libxtst" ,libxtst)
("libxi" ,libxi)
("libxinerama" ,libxinerama)
("libxrender" ,libxrender)
("libjpeg" ,libjpeg)
("libpng" ,libpng)
("giflib" ,giflib)
("perl" ,perl)
("procps" ,procps) ;for "free", even though I'm not sure we should use it
("openjdk6-src"
,(origin
(method url-fetch)
(uri "https://java.net/downloads/openjdk6/openjdk-6-src-b41-04_jan_2017.tar.xz")
(sha256
(base32
"058szix0j280g14jzajvsixx1j2dxmc10r848f5swpy6rr8x8d4f"))))
("lcms" ,lcms)
("zlib" ,zlib)
("gtk" ,gtk+-2)
("fontconfig" ,fontconfig)
("freetype" ,freetype)
("gcj" ,gcj)))
(home-page "http://icedtea.classpath.org")
(synopsis "Java development kit")
(description
"The OpenJDK built with the IcedTea build harness.")
;; IcedTea is released under the GPL2 + Classpath exception, which is the
;; same license as both GNU Classpath and OpenJDK.
(license license:gpl2+)))
(define-public icedtea-7
(let* ((version "2.6.9")
(drop (lambda (name hash)
(origin
(method url-fetch)
(uri (string-append
"http://icedtea.classpath.org/download/drops/"
"/icedtea7/" version "/" name ".tar.bz2"))
(sha256 (base32 hash))))))
(package (inherit icedtea-6)
(version version)
(source (origin
(method url-fetch)
(uri (string-append
"http://icedtea.wildebeest.org/download/source/icedtea-"
version ".tar.xz"))
(sha256
(base32
"1slmajiakq7sk137vgqq9c93r5s620a46lw2jwbnzxhysjw3wkwf"))
(modules '((guix build utils)))
(snippet
'(substitute* "Makefile.in"
;; link against libgcj to avoid linker error
(("-o native-ecj")
"-lgcj -o native-ecj")
;; do not leak information about the build host
(("DISTRIBUTION_ID=\"\\$\\(DIST_ID\\)\"")
"DISTRIBUTION_ID=\"\\\"guix\\\"\"")))))
(arguments
`(;; There are many test failures. Some are known to
;; fail upstream, others relate to not having an X
;; server running at test time, yet others are a
;; complete mystery to me.
;; hotspot: passed: 241; failed: 45; error: 2
;; langtools: passed: 1,934; failed: 26
;; jdk: unknown
#:tests? #f
;; Apparently, the C locale is needed for some of the tests.
#:locale "C"
,@(substitute-keyword-arguments (package-arguments icedtea-6)
((#:modules modules)
`((ice-9 match)
(srfi srfi-26)
,@modules))
((#:configure-flags flags)
;; TODO: package pcsc and sctp, and add to inputs
`(append '("--disable-system-pcsc"
"--disable-system-sctp")
,flags))
((#:phases phases)
`(modify-phases ,phases
(replace 'unpack
(lambda* (#:key source inputs #:allow-other-keys)
(let ((target (string-append "icedtea-" ,version))
(unpack (lambda* (name #:optional dir)
(let ((dir (or dir
(string-drop-right name 5))))
(mkdir dir)
(zero? (system* "tar" "xvf"
(assoc-ref inputs name)
"-C" dir
"--strip-components=1"))))))
(mkdir target)
(and
(zero? (system* "tar" "xvf" source
"-C" target "--strip-components=1"))
(chdir target)
(unpack "openjdk-src" "openjdk.src")
(with-directory-excursion "openjdk.src"
(for-each unpack
(filter (cut string-suffix? "-drop" <>)
(map (match-lambda
((name . _) name))
inputs))))
#t))))
(replace
'set-additional-paths
(lambda* (#:key inputs #:allow-other-keys)
(let (;; Get target-specific include directory so that
;; libgcj-config.h is found when compiling hotspot.
(gcjinclude (let* ((port (open-input-pipe "gcj -print-file-name=include"))
(str (read-line port)))
(close-pipe port)
str)))
(substitute* "openjdk.src/jdk/make/common/shared/Sanity.gmk"
(("ALSA_INCLUDE=/usr/include/alsa/version.h")
(string-append "ALSA_INCLUDE="
(assoc-ref inputs "alsa-lib")
"/include/alsa/version.h")))
(setenv "CC" "gcc")
(setenv "CPATH"
(string-append gcjinclude ":"
(assoc-ref inputs "libxcomposite")
"/include/X11/extensions" ":"
(assoc-ref inputs "libxrender")
"/include/X11/extensions" ":"
(assoc-ref inputs "libxtst")
"/include/X11/extensions" ":"
(assoc-ref inputs "libxinerama")
"/include/X11/extensions" ":"
(or (getenv "CPATH") "")))
(setenv "ALT_OBJCOPY" (which "objcopy"))
(setenv "ALT_CUPS_HEADERS_PATH"
(string-append (assoc-ref inputs "cups")
"/include"))
(setenv "ALT_FREETYPE_HEADERS_PATH"
(string-append (assoc-ref inputs "freetype")
"/include"))
(setenv "ALT_FREETYPE_LIB_PATH"
(string-append (assoc-ref inputs "freetype")
"/lib")))))
(add-after
'unpack 'fix-x11-extension-include-path
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "openjdk.src/jdk/make/sun/awt/mawt.gmk"
(((string-append "\\$\\(firstword \\$\\(wildcard "
"\\$\\(OPENWIN_HOME\\)"
"/include/X11/extensions\\).*$"))
(string-append (assoc-ref inputs "libxrender")
"/include/X11/extensions"
" -I" (assoc-ref inputs "libxtst")
"/include/X11/extensions"
" -I" (assoc-ref inputs "libxinerama")
"/include/X11/extensions"))
(("\\$\\(wildcard /usr/include/X11/extensions\\)\\)") ""))
#t))
(replace
'fix-test-framework
(lambda _
;; Fix PATH in test environment
(substitute* "test/jtreg/com/sun/javatest/regtest/Main.java"
(("PATH=/bin:/usr/bin")
(string-append "PATH=" (getenv "PATH"))))
(substitute* "test/jtreg/com/sun/javatest/util/SysEnv.java"
(("/usr/bin/env") (which "env")))
(substitute* "openjdk.src/hotspot/test/test_env.sh"
(("/bin/rm") (which "rm"))
(("/bin/cp") (which "cp"))
(("/bin/mv") (which "mv")))
#t))
(delete 'patch-patches))))))
(native-inputs
`(("openjdk-src"
,(drop "openjdk"
@ -946,11 +784,55 @@ build process and its dependencies, whereas Make uses Makefile format.")
("hotspot-drop"
,(drop "hotspot"
"16ijxy8br8dla339m4i90wr9xpf7s8z3nrhfyxm7jahr8injpzyl"))
,@(fold alist-delete (package-native-inputs icedtea-6)
'("openjdk6-src"))))
("ant" ,ant)
("attr" ,attr)
("autoconf" ,autoconf)
("automake" ,automake)
("coreutils" ,coreutils)
("diffutils" ,diffutils) ;for tests
("gawk" ,gawk)
("grep" ,grep)
("libtool" ,libtool)
("pkg-config" ,pkg-config)
("wget" ,wget)
("which" ,which)
("cpio" ,cpio)
("zip" ,zip)
("unzip" ,unzip)
("fastjar" ,fastjar)
("libxslt" ,libxslt) ;for xsltproc
("nss-certs" ,nss-certs)
("perl" ,perl)
("procps" ,procps) ;for "free", even though I'm not sure we should use it
("gcj" ,gcj)))
(inputs
`(("libxcomposite" ,libxcomposite)
,@(package-inputs icedtea-6))))))
`(("alsa-lib" ,alsa-lib)
("cups" ,cups)
("libx11" ,libx11)
("libxcomposite" ,libxcomposite)
("libxt" ,libxt)
("libxtst" ,libxtst)
("libxi" ,libxi)
("libxinerama" ,libxinerama)
("libxrender" ,libxrender)
("libjpeg" ,libjpeg)
("libpng" ,libpng)
("mit-krb5" ,mit-krb5)
("nss" ,nss)
("giflib" ,giflib)
("fontconfig" ,fontconfig)
("freetype" ,freetype)
("lcms" ,lcms)
("zlib" ,zlib)
("gtk" ,gtk+-2)))
(home-page "http://icedtea.classpath.org")
(synopsis "Java development kit")
(description
"This package provides the Java development kit OpenJDK built with the
IcedTea build harness.")
;; IcedTea is released under the GPL2 + Classpath exception, which is the
;; same license as both GNU Classpath and OpenJDK.
(license license:gpl2+))))
(define-public icedtea-8
(let* ((version "3.3.0")
@ -973,10 +855,15 @@ build process and its dependencies, whereas Make uses Makefile format.")
"02vmxa6gc6gizcri1fy797qmmm9y77vgi7gy9pwkk4agcw4zyr5p"))
(modules '((guix build utils)))
(snippet
'(substitute* "Makefile.am"
;; do not leak information about the build host
(("DISTRIBUTION_ID=\"\\$\\(DIST_ID\\)\"")
"DISTRIBUTION_ID=\"\\\"guix\\\"\"")))))
'(begin
(substitute* "acinclude.m4"
;; Do not embed build time
(("(DIST_ID=\"Custom build).*$" _ prefix)
(string-append prefix "\"\n"))
;; Do not leak information about the build host
(("DIST_NAME=\"\\$build_os\"")
"DIST_NAME=\"guix\""))
#t))))
(arguments
(substitute-keyword-arguments (package-arguments icedtea-7)
((#:configure-flags flags)
@ -1023,9 +910,6 @@ build process and its dependencies, whereas Make uses Makefile format.")
(find-files "openjdk.src/jdk/src/solaris/native"
"\\.c|\\.h"))
#t)))
;; FIXME: This phase is needed but fails with this version of
;; IcedTea.
(delete 'install-keystore)
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let ((doc (string-append (assoc-ref outputs "doc")
@ -1074,13 +958,13 @@ build process and its dependencies, whereas Make uses Makefile format.")
(define-public java-xz
(package
(name "java-xz")
(version "1.5")
(version "1.6")
(source (origin
(method url-fetch)
(uri (string-append "http://tukaani.org/xz/xz-java-" version ".zip"))
(sha256
(base32
"0x6vn9dp9kxk83x2fp3394n95dk8fx9yg8jns9371iqsn0vy8ih1"))))
"1z3p1ri1gvl07inxn0agx44ck8n7wrzfmvkz8nbq3njn8r9wba8x"))))
(build-system ant-build-system)
(arguments
`(#:tests? #f ; There are no tests to run.

4
gnu/packages/jemalloc.scm
View File

@ -27,7 +27,7 @@
(define-public jemalloc
(package
(name "jemalloc")
(version "4.4.0")
(version "4.5.0")
(source (origin
(method url-fetch)
(uri (string-append
@ -35,7 +35,7 @@
version "/jemalloc-" version ".tar.bz2"))
(sha256
(base32
"0cxhhybcbi02szavlxzwhvmqvddi7kgy71qxz2nz3lhqjwzadbm7"))))
"10373xhpc10pgmai9fkc1z0rs029qlcb3c0qfnvkbwdlcibdh2cl"))))
(build-system gnu-build-system)
(home-page "http://jemalloc.net/")
(synopsis "General-purpose scalable concurrent malloc implementation")

2
gnu/packages/jrnl.scm
View File

@ -48,7 +48,7 @@
("python-pytz" ,python-pytz)
("python-tzlocal" ,python-tzlocal)
("python-six" ,python-six)
("python-dateutil" , python-dateutil-2)
("python-dateutil" ,python-dateutil)
("python-parsedatetime" ,python-parsedatetime)))
(home-page "http://maebert.github.io/jrnl/")
(synopsis "Personal journal application")

1
gnu/packages/kde-frameworks.scm
View File

@ -2202,6 +2202,7 @@ makes starting KDE applications faster and reduces memory consumption.")
"mirror://kde/stable/frameworks/"
(version-major+minor version) "/"
name "-" version ".tar.xz"))
(patches (search-patches "kio-CVE-2017-6410.patch"))
(sha256
(base32
"1hqc88c2idi9fkb7jy82csb0i740lghv0p2fg1gaglcarjdz7nia"))))

14
gnu/packages/kde.scm
View File

@ -39,7 +39,7 @@
(define-public kdevelop
(package
(name "kdevelop")
(version "5.0.3")
(version "5.0.4")
(source
(origin
(method url-fetch)
@ -48,7 +48,7 @@
version ".tar.xz"))
(sha256
(base32
"00gn2c66pyd9qaa0zhn2lqam0zsg7fbyi13hk32wclxq73y8v98p"))))
"0max4g1i8xf5g7a8zm60qkr2j8w5bsqzxz914z43fj5ipnr4448r"))))
(build-system cmake-build-system)
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)
@ -148,15 +148,15 @@ for some KDevelop language plugins (Ruby, PHP, CSS...).")
(define-public kdevplatform
(package
(name "kdevplatform")
(version "5.0.3")
(version "5.0.4")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/KDE/kdevplatform/archive/v"
version ".tar.gz"))
(uri (string-append "mirror://kde/stable/kdevelop"
"/" version "/src/kdevplatform-"
version ".tar.xz"))
(sha256
(base32
"1k40wg08iwyswnpbs4bfh4yq38pp0qi78shjh4pf7yfa2kbid30j"))
(file-name (string-append name "-" version ".tar.gz"))))
"0wfl5azblnpmc7hydfvm7450343m1v7cr2g9gw0qs1432gbzraq1"))))
(build-system cmake-build-system)
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)

14
gnu/packages/ldc.scm
View File

@ -77,7 +77,7 @@ and freshness without requiring additional information from the user.")
(define-public ldc-bootstrap
(package
(name "ldc")
(version "0.17.2")
(version "0.17.3")
(source (origin
(method url-fetch)
(uri (string-append
@ -86,7 +86,7 @@ and freshness without requiring additional information from the user.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0iksl6cvhsiwnlh15b7s9v8f3grxk27jn0vja9n4sad7fvfwmmlc"))))
"135rgwwk82ccqp4n3fhqz4696jmvip90fg5ql2kccq5h1r71gb82"))))
(build-system cmake-build-system)
(supported-systems '("x86_64-linux" "i686-linux" "armhf-linux"))
(arguments
@ -140,7 +140,7 @@ and freshness without requiring additional information from the user.")
version ".tar.gz"))
(sha256
(base32
"07hh3ic3r755mq9hn9gfr0wlc5y8cr91xz2ydb6gqy4zy8jgp5s9"))
"0qywnvnp019mmmr74aw90ir9f03iz0hc7cgzna609agsar0b27jl"))
(patches (search-patches "ldc-disable-tests.patch"))))
("druntime-src"
,(origin
@ -150,7 +150,7 @@ and freshness without requiring additional information from the user.")
version ".tar.gz"))
(sha256
(base32
"1m1dhday9dl3s04njmd29z7ism2xn2ksb9qlrwzykdgz27b3dk6x"))))
"0z418n6x2fxac07sxpi4rl69069qiym4w6r9sjppn91q58qh8hjs"))))
("dmd-testsuite-src"
,(origin
(method url-fetch)
@ -159,7 +159,7 @@ and freshness without requiring additional information from the user.")
version ".tar.gz"))
(sha256
(base32
"0n7gvalxwfmia4gag53r9qhcnk2cqrw3n4icj1yri0zkgc27pm60"))))))
"196mkfax5y3yqm3gz7jhqhnkjwrvr2m4a8nc9k41l0511ldzsk9x"))))))
(home-page "http://wiki.dlang.org/LDC")
(synopsis "LLVM compiler for the D programming language")
(description
@ -181,7 +181,7 @@ latest DMD frontend and uses LLVM as backend.")
(package
(inherit ldc-bootstrap)
(name "ldc")
(version "1.1.0")
(version "1.1.1")
;; Beta version needed to compile various scientific tools that require
;; the newer beta versions, and won't compile successfully with the
;; older stable version.
@ -193,7 +193,7 @@ latest DMD frontend and uses LLVM as backend.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"10zkrmx9bcmhfxvgykm3fkjamzc8js96wm032bv0fyil5c9ja2y1"))))
"0yjiwg8pnlm2286bwdkwasaqw6ys7lymrqvhh5xyb1adha1ndcav"))))
(arguments
`(#:phases
(modify-phases %standard-phases

84
gnu/packages/libevent.scm
View File

@ -26,10 +26,13 @@
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix build-system gnu)
#:use-module (gnu packages base)
#:use-module (gnu packages python)
#:use-module (guix build-system perl)
#:use-module (gnu packages autotools)
#:use-module (gnu packages pkg-config))
#:use-module (gnu packages base)
#:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages tls))
(define-public libevent
(package
@ -149,3 +152,78 @@ resolution, asynchronous file system operations, and threading primitives.")
;; A few files fall under other non-copyleft licenses; see 'LICENSE' for
;; details.
(license x11)))
(define-public perl-anyevent
(package
(name "perl-anyevent")
(version "7.13")
(source (origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/M/ML/MLEHMANN/"
"AnyEvent-" version ".tar.gz"))
(sha256
(base32
"1b84ilkbrfbzqapv25x8z6gva92skbrf2srybdabb1wnxx6ky454"))))
(build-system perl-build-system)
(native-inputs
`(("perl-canary-stability" ,perl-canary-stability)))
(propagated-inputs
`(("perl-async-interrupt" ,perl-async-interrupt)
("perl-ev" ,perl-ev)
("perl-guard" ,perl-guard)
("perl-json" ,perl-json)
("perl-json-xs" ,perl-json-xs)
("perl-net-ssleay" ,perl-net-ssleay)
("perl-task-weaken" ,perl-task-weaken)))
(home-page "http://search.cpan.org/dist/AnyEvent")
(synopsis
"API for I/O, timer, signal, child process and completion events")
(description
"This module allows using a variety of events without forcing module
authors to pick a specific event loop, and without noticable overhead.
Currently supported event loops are EV, Event, Glib/Gtk2, Tk, Qt,
@code{Event::Lib}, Irssi, @code{IO::Async} and POE (and thus also WxWidgets
and Prima). It also comes with a very fast Pure Perl event loop that does
not rely on XS.")
(license (package-license perl))))
(define-public perl-ev
(package
(name "perl-ev")
(version "4.22")
(source (origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/M/ML/MLEHMANN/EV-"
version ".tar.gz"))
(sha256
(base32
"14d9115q8f2ca2q3vbcalm55zqsbx8xjq5aj098laj9f9rrzirra"))
(modules '((guix build utils)))
(snippet
'(begin
;; Drop bundled libev.
(delete-file-recursively "libev")
#t))))
(build-system perl-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'unpack-libev
;; This package requires the libev *sources* in order
;; to build. Unpack system libev here...
(lambda* (#:key inputs #:allow-other-keys)
(mkdir "./libev")
(zero? (system* "tar" "-xf" (assoc-ref inputs "libev-source")
"-C" "./libev" "--strip-components=1")))))))
(native-inputs
`(("libev-source" ,(package-source libev))
("perl-canary-stability" ,perl-canary-stability)))
(propagated-inputs
`(("perl-common-sense" ,perl-common-sense)))
(home-page "http://search.cpan.org/dist/EV")
(synopsis "Perl interface to libev")
(description
"This module provides an interface to @code{libev}, a high performance
full-featured event loop. It can be used through the @code{AnyEvent} module
and still be faster than other event loops currently supported in Perl.")
(license (package-license perl))))

4
gnu/packages/lighting.scm
View File

@ -36,7 +36,7 @@
(define-public ola
(package
(name "ola")
(version "0.10.2")
(version "0.10.3")
(source (origin
(method url-fetch)
(uri (string-append
@ -45,7 +45,7 @@
(patches (search-patches "ola-readdir-r.patch"))
(sha256
(base32
"09zx1c8nkj29shfdzkahrh9397m3mwnsy0gj7jrb63f89f3n2vlq"))))
"1yf1yy9n64n73zjq2bwc0gik0dd3n05297hdrrma2qvb0imzm5h1"))))
(build-system gnu-build-system)
(native-inputs
`(("bison" ,bison)

69
gnu/packages/linux.scm
View File

@ -8,7 +8,7 @@
;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2016 Alex Kost <alezost@gmail.com>
;;; Copyright © 2016, 2017 Alex Kost <alezost@gmail.com>
;;; Copyright © 2016 Raymond Nicholson <rain1@openmailbox.org>
;;; Copyright © 2016 Mathieu Lirzin <mthl@gnu.org>
;;; Copyright © 2016 Nicolas Goaziou <mail@nicolasgoaziou.fr>
@ -107,6 +107,7 @@
((string-prefix? "mips" arch) "mips")
((string-prefix? "arm" arch) "arm")
((string-prefix? "aarch64" arch) "arm64")
((string-prefix? "alpha" arch) "alpha")
(else arch))))
(define-public (system->defconfig system)
@ -204,11 +205,10 @@ defconfig. Return the appropiate make target if applicable, otherwise return
(define* (kernel-config arch #:key variant)
"Return the absolute file name of the Linux-Libre build configuration file
for ARCH and optionally VARIANT, or #f if there is no such configuration."
(let* ((name (string-append "linux-libre-"
(if variant (string-append variant "-") "")
(let* ((name (string-append (if variant (string-append variant "-") "")
(if (string=? "i386" arch) "i686" arch) ".conf"))
(file (string-append "gnu/packages/" name)))
(search-path %load-path file)))
(file (string-append "linux-libre/" name)))
(search-auxiliary-file file)))
(define %default-extra-linux-options
`(;; https://lists.gnu.org/archive/html/guix-devel/2014-04/msg00039.html
@ -348,8 +348,8 @@ It has been modified to remove all non-free binary blobs.")
(define %intel-compatible-systems '("x86_64-linux" "i686-linux"))
(define %linux-libre-version "4.10")
(define %linux-libre-hash "167zzgkivpqsp07did25wjqsswddzp3gifcdkq7xk00llxlmspla")
(define %linux-libre-version "4.10.1")
(define %linux-libre-hash "0mvwrjny1bjqyjqjxff9m97j48ybfdw8qpdazr5rwk12234v4k3d")
(define-public linux-libre
(make-linux-libre %linux-libre-version
@ -358,14 +358,14 @@ It has been modified to remove all non-free binary blobs.")
#:configuration-file kernel-config))
(define-public linux-libre-4.9
(make-linux-libre "4.9.11"
"1gypfg2984zr4z7hihnl3bbpxnk1mrqbynb6xd8ad2v2z04aw13q"
(make-linux-libre "4.9.13"
"16miggwcwfpm7kx0yz256x887rky9wgmp1grg850lf8sdkiz0a1p"
%intel-compatible-systems
#:configuration-file kernel-config))
(define-public linux-libre-4.4
(make-linux-libre "4.4.50"
"0c157kk0vgrb1fsyy4q3czqdg4npgql82n6p303afy8ylh2w6d3l"
(make-linux-libre "4.4.52"
"1fzcq9bbsxiij2fh6kgwrp417sy2j5gnbzs0wwlmznj7mvysl7qg"
%intel-compatible-systems
#:configuration-file kernel-config))
@ -373,7 +373,17 @@ It has been modified to remove all non-free binary blobs.")
(make-linux-libre "4.1.38"
"165kmzglhg63hn7y4q7r6cb2dpsljxiq1czvgyx0bkd1vd2bcvsa"
%intel-compatible-systems
#:configuration-file kernel-config))
#:configuration-file kernel-config
#:patches
(list %boot-logo-patch
(origin
(method url-fetch)
(uri "\
https://git.kernel.org/cgit/linux/kernel/git/torvalds/linux.git/patch/?id=5edabca9d4cff7f1f2b68f0bac55ef99d9798ba4")
(file-name "linux-libre-CVE-2017-6074.patch")
(sha256
(base32
"1x40slfz1qxgiaznyy13bwlh34450pkyyrkljpyjlx6c4mrzb1jj"))))))
(define-public linux-libre-arm-generic
(make-linux-libre %linux-libre-version
@ -821,17 +831,25 @@ images more compressible.")
(define-public strace
(package
(name "strace")
(version "4.7")
(version "4.16")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/strace/strace/" version
"/strace-" version ".tar.xz"))
(sha256
(base32
"158iwk0pl2mfw93m1843xb7a2zb8p6lh0qim07rca6f1ff4dk764"))))
"1vzhmpcy989i4k12q4cc438yal2ghhm6x7ychscjbhcf2yspqj4q"))))
(build-system gnu-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-/bin/sh
(lambda _
(substitute* "strace.c"
(("/bin/sh") (which "sh")))
#t)))))
(native-inputs `(("perl" ,perl)))
(home-page "http://strace.sourceforge.net/")
(home-page "https://strace.io/")
(synopsis "System call tracer for Linux")
(description
"strace is a system call tracer, i.e. a debugging tool which prints out a
@ -1022,7 +1040,7 @@ packet filter.")
(define-public iproute
(package
(name "iproute2")
(version "4.9.0")
(version "4.10.0")
(source (origin
(method url-fetch)
(uri (string-append
@ -1030,7 +1048,7 @@ packet filter.")
version ".tar.xz"))
(sha256
(base32
"1i0n071hiqxw1gisngw2jln3kcp9sh47n6fj5hdwqrvp7w20zwy0"))))
"1a59y1zkddvr7z0lh2y9iasbh9wpfc1n39p56xcd6jkhzk0y3c92"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no test suite
@ -1039,6 +1057,7 @@ packet filter.")
(string-append "BASH_COMPDIR=" out
"/etc/bash_completion.d")
(string-append "LIBDIR=" out "/lib")
(string-append "HDRDIR=" out "/include")
(string-append "SBINDIR=" out "/sbin")
(string-append "CONFDIR=" out "/etc")
(string-append "DOCDIR=" out "/share/doc/"
@ -1075,10 +1094,10 @@ allows a system administrator to make use of all iproute2 features, including
traffic control.
iproute2 is usually shipped in a package called iproute or iproute2 and
consists of several tools, of which the most important are ip and tc. ip
controls IPv4 and IPv6 configuration and tc stands for traffic control. Both
tools print detailed usage messages and are accompanied by a set of
manpages.")
consists of several tools, of which the most important are @command{ip} and
@command{tc}. @command{ip} controls IPv4 and IPv6 configuration and
@command{tc} stands for traffic control. Both tools print detailed usage
messages and are accompanied by a set of manpages.")
(license license:gpl2+)))
(define-public net-tools
@ -2318,14 +2337,14 @@ about ACPI devices.")
(define-public acpid
(package
(name "acpid")
(version "2.0.23")
(version "2.0.28")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/acpid2/acpid-"
version ".tar.xz"))
(sha256
(base32
"1vl7c6vc724v4jwki17czgj6lnrknnj1a6llm8gkl32i2gnam5j3"))))
"043igasvp1l6nv5rzh4sksmymay2qn20anl4zm4zvwnkn1a3l34q"))))
(build-system gnu-build-system)
(home-page "https://sourceforge.net/projects/acpid2/")
(synopsis "Daemon for delivering ACPI events to user-space programs")
@ -3209,7 +3228,7 @@ of flash storage.")
(define-public libseccomp
(package
(name "libseccomp")
(version "2.3.1")
(version "2.3.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/seccomp/libseccomp/"
@ -3217,7 +3236,7 @@ of flash storage.")
"/libseccomp-" version ".tar.gz"))
(sha256
(base32
"0asnlkzqms520r0dra08dzcz5hh6hs7lkajfw9wij3vrd0hxsnzz"))))
"18dwfxzsw3agiy2dxbflrkhmjgvlji0wwkk636nabh2ng41qrp1x"))))
(build-system gnu-build-system)
(native-inputs
`(("which" ,which)))

76
gnu/packages/lisp.scm
View File

@ -3,7 +3,7 @@
;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016 Federico Beffa <beffa@fbengineering.ch>
;;; Copyright © 2016 ng0 <ngillmann@runbox.com>
;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net>
;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
;;;
@ -37,16 +37,27 @@
#:use-module (guix build-system asdf)
#:use-module (guix build-system trivial)
#:use-module (gnu packages base)
#:use-module (gnu packages compression)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages maths)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages bdw-gc)
#:use-module (gnu packages libffi)
#:use-module (gnu packages libffcall)
#:use-module (gnu packages readline)
#:use-module (gnu packages sdl)
#:use-module (gnu packages libsigsegv)
#:use-module (gnu packages linux)
#:use-module (gnu packages admin)
#:use-module (gnu packages ed)
#:use-module (gnu packages gl)
#:use-module (gnu packages gcc)
#:use-module (gnu packages glib)
#:use-module (gnu packages gettext)
#:use-module (gnu packages m4)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages version-control)
#:use-module (gnu packages xorg)
#:use-module (ice-9 match)
#:use-module (srfi srfi-1))
@ -530,6 +541,69 @@ The core is 12 builtin special forms and 33 builtin functions.")
(home-page "https://github.com/JeffBezanson/femtolisp")
(license license:bsd-3))))
(define-public lush2
(package
(name "lush2")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/lush/lush2/lush-"
version ".tar.gz"))
(modules '((guix build utils)))
(snippet
'(begin
(substitute* "src/unix.c"
(("\\{ \"LUSH_DATE\", __DATE__ \\},") "")
(("\\{ \"LUSH_TIME\", __TIME__ \\},") ""))
(substitute* "src/main.c"
(("\" \\(built \" __DATE__ \"\\)\"") ""))))
(sha256
(base32
"02pkfn3nqdkm9fm44911dbcz0v3r0l53vygj8xigl6id5g3iwi4k"))))
(build-system gnu-build-system)
(arguments
`(;; We have to add these LIBS so that they are found.
#:configure-flags (list "LIBS=-lz"
"X_EXTRA_LIBS=-lfontconfig"
"--with-x")
#:tests? #f)) ; No make check.
(native-inputs `(("intltool" ,intltool)))
(inputs
`(("alsa-lib" ,alsa-lib)
("sdl" ,sdl)
("sdl-image" ,sdl-image)
("sdl-mixer" ,sdl-mixer)
("sdl-net" ,sdl-net)
("sdl-ttf" ,sdl-ttf)
("lapack" ,lapack)
("libxft" ,libxft)
("fontconfig" ,fontconfig)
("gsl" ,gsl)
("openblas" ,openblas)
("glu" ,glu)
("mesa" ,mesa)
("mesa-utils" ,mesa-utils)
("binutils" ,binutils)
("libiberty" ,libiberty)
("readline" ,readline)
("zlib" ,zlib)
("gettext-minimal" ,gettext-minimal)))
(synopsis "Lisp Universal Shell")
(description
"Lush is an object-oriented Lisp interpreter/compiler with features
designed to please people who want to prototype large numerical
applications. Lush includes an extensive library of
vector/matrix/tensor manipulation, numerous numerical libraries
(including GSL, LAPACK, and BLAS), a set of graphic functions, a
simple GUI toolkit, and interfaces to various graphic and multimedia
libraries such as OpenGL, SDL, Video4Linux, and ALSA (video/audio
grabbing), and others. Lush is an ideal frontend script language for
programming projects written in C or other languages. Lush also has
libraries for Machine Learning, Neural Nets and statistical estimation.")
(home-page "http://lush.sourceforge.net/")
(license license:lgpl2.1+)))
(define-public sbcl-alexandria
(let ((revision "1")
(commit "926a066611b7b11cb71e26c827a271e500888c30"))

12
gnu/packages/lua.scm
View File

@ -283,18 +283,6 @@ communication. It takes an already established TCP connection and creates a
secure session between the peers.")
(license (package-license lua-5.1))))
(define-public lua5.1-sec-0.5
(package
(inherit lua5.1-sec)
(version "0.5.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/brunoos/luasec/archive/"
"luasec-" version ".tar.gz"))
(sha256
(base32
"01llf5bcrjmqqy6m65avqkajz7h79rvkka6rd131kwr10n75yp3d"))))))
(define-public lua-lgi
(package
(name "lua-lgi")

25
gnu/packages/machine-learning.scm
View File

@ -504,20 +504,21 @@ and a QP solver.")
(define-public dlib
(package
(name "dlib")
(version "19.1")
(version "19.3")
(source (origin
(method url-fetch)
(uri (string-append
"http://dlib.net/files/dlib-" version ".tar.bz2"))
(sha256
(base32
"0p2pvcdalc6jhb6r99ybvjd9x74sclr0ngswdg9j2xl5pj7knbr4"))
"0gfy83av717qymv53yv7ki6mgh6mdw4xcxxbjk8lrs72f8qvnrcw"))
(modules '((guix build utils)))
(snippet
'(begin
;; Delete ~13MB of bundled dependencies.
(delete-file-recursively "dlib/external")
(delete-file-recursively "docs/dlib/external")))))
(delete-file-recursively "docs/dlib/external")
#t))))
(build-system cmake-build-system)
(arguments
`(#:phases
@ -532,8 +533,7 @@ and a QP solver.")
(add-after 'disable-asserts 'disable-failing-tests
(lambda _
;; One test times out on MIPS, so we need to disable it.
;; The rest is known to fail on non-x86_64 platforms in the current release.
;; Some have been fixed in git; this list should be readjusted next update.
;; Others are flaky on some platforms.
(let* ((system ,(or (%current-target-system)
(%current-system)))
(disabled-tests (cond
@ -541,17 +541,16 @@ and a QP solver.")
'("object_detector" ; timeout
"data_io"))
((string-prefix? "armhf" system)
'("learning_to_track" "max_cost_assignment"))
'("learning_to_track"))
((string-prefix? "i686" system)
'("optimization" "matrix2" "mpc"))
'("optimization"))
(else '()))))
;; The following test fails due a bug in openblas < 0.2.18.
(append! disabled-tests '("empirical_map"))
(for-each
(lambda (test)
(substitute* "dlib/test/makefile"
(((string-append "SRC \\+= " test "\\.cpp")) "")) #t)
disabled-tests))))
(((string-append "SRC \\+= " test "\\.cpp")) "")))
disabled-tests)
#t)))
(replace 'check
(lambda _
;; No test target, so we build and run the unit tests here.
@ -562,7 +561,9 @@ and a QP solver.")
(zero? (system* "./dtest" "--runall")))))))
(add-after 'install 'delete-static-library
(lambda* (#:key outputs #:allow-other-keys)
(delete-file (string-append (assoc-ref outputs "out") "/lib/libdlib.a")))))))
(delete-file (string-append (assoc-ref outputs "out")
"/lib/libdlib.a"))
#t)))))
(native-inputs
`(("pkg-config" ,pkg-config)))
(inputs

62
gnu/packages/mail.scm
View File

@ -8,7 +8,7 @@
;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org>
;;; Copyright © 2015, 2016 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
;;; Copyright © 2016 Al McElrath <hello@yrns.org>
;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
@ -214,14 +214,14 @@ aliasing facilities to work just as they would on normal mail.")
(define-public mutt
(package
(name "mutt")
(version "1.7.2")
(version "1.8.0")
(source (origin
(method url-fetch)
(uri (string-append "ftp://ftp.mutt.org/pub/mutt/mutt-"
version ".tar.gz"))
(sha256
(base32
"1yazrl82s9fxmamnlvwmsxhwrxnwv6kwakgfmawda8ndhwb50lqm"))
"1axdcylyv0p194y6lj1jx127g5yc74zqzzxdc014cjw02bd1x125"))
(patches (search-patches "mutt-store-references.patch"))))
(build-system gnu-build-system)
(inputs
@ -254,7 +254,7 @@ operating systems.")
(package
(inherit mutt)
(name "neomutt")
(version "20170113")
(version "20170225")
(source
(origin
(method url-fetch)
@ -263,10 +263,12 @@ operating systems.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0cqr77q263b5qcmdw6g0qixdpk6gmzgzpa03v226nr55v2ips9jg"))))
"00ll35g9pcanzrxsjp09vrmq6flml249dipcznrq2z4jy2zd386p"))))
(inputs
`(("cyrus-sasl" ,cyrus-sasl)
("gdbm" ,gdbm)
("lmdb" ,lmdb)
("tokyocabinet" ,tokyocabinet)
("gpgme" ,gpgme)
("ncurses" ,ncurses)
("gnutls" ,gnutls)
@ -289,10 +291,11 @@ operating systems.")
"--enable-gpgme"
;; database, implies header caching
"--without-tokyocabinet"
;; neomutt supports building multiple backends
"--with-tokyocabinet"
"--without-qdbm"
"--without-bdb"
"--without-lmdb"
"--with-lmdb"
"--with-gdbm"
"--with-gnutls"
@ -659,14 +662,14 @@ invoking @command{notifymuch} from the post-new hook.")
(define-public notmuch
(package
(name "notmuch")
(version "0.23.5")
(version "0.23.7")
(source (origin
(method url-fetch)
(uri (string-append "https://notmuchmail.org/releases/notmuch-"
version ".tar.gz"))
(sha256
(base32
"0ry2k9sdwd1vw8cf6svch8wk98523s07mwxvsf7b8kghqnrr89n6"))))
"04w90c43zk23pys6prkqb14al408qypifcfj2qznqpwlf46v26zi"))))
(build-system gnu-build-system)
(arguments
'(#:make-flags (list "V=1") ; Verbose test output.
@ -1509,7 +1512,11 @@ maintained.")
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(doc (string-append out "/share/doc/khard")))
(copy-recursively "misc/khard" doc)))))))
(copy-recursively "misc/khard" doc)
#t))))
;; FIXME: check phase fails with
;; "Config file /tmp/.config/khard/khard.conf not available"
#:tests? #f))
(propagated-inputs
`(("python-vobject" ,python-vobject)
("python-pyyaml" ,python-pyyaml)
@ -1951,3 +1958,38 @@ installation on systems where resources are limited. Its features include:
@item Rich and customisable texts for automated operations.
@end enumerate\n")
(license license:expat)))
(define-public blists
(package
(name "blists")
(version "1.0")
(source
(origin
(method url-fetch)
(uri (string-append "http://download.openwall.net/pub/projects/"
"blists/blists-" version ".tar.gz"))
(sha256
(base32
"1gp51kmb8yv8d693wcpdslmwlbw5w2kgz4kxhrcaf7y89w8wy4qd"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; No tests
#:phases
(modify-phases %standard-phases
(delete 'configure)
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin")))
(install-file "bindex" bin)
(install-file "bit" bin)
#t))))))
(home-page "http://www.openwall.com/blists/")
(synopsis "Web interface to mailing list archives")
(description
"Blists is a web interface to mailing list archives that works off
indexed mbox files. There are two programs: @code{bindex} and @code{bit}.
@code{bindex} generates or updates the index file (incremental updates
are supported). @code{bit} is a CGI/SSI program that generates web pages
on the fly. Both programs are written in C and are very fast.")
(license license:expat)))

4
gnu/packages/man.scm
View File

@ -202,7 +202,7 @@ automatically.")
(define-public txt2man
(package
(name "txt2man")
(version "1.5.6")
(version "1.6.0")
(source
(origin
(method url-fetch)
@ -211,7 +211,7 @@ automatically.")
version ".tar.gz"))
(sha256
(base32
"0sjq687jknq65wbnjh2siq8hc09ydpnlmrkrnwl66mrhd4n9g7fz"))))
"168cj96974n2z0igin6j1ic1m45zyic7nm5ark7frq8j78rrx4zn"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no "check" target

4
gnu/packages/markdown.scm
View File

@ -104,7 +104,7 @@ convert it to structurally valid XHTML (or HTML).")
(define-public cmark
(package
(name "cmark")
(version "0.26.1")
(version "0.27.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/jgm/cmark/archive/"
@ -112,7 +112,7 @@ convert it to structurally valid XHTML (or HTML).")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1mpmcy4bbmc8m058zqs9dwx49lcfi7bdnfszsr9y66cwgylia1mm"))))
"1da62ispca9aal2a36gaj87175rv5013pl7x740vk32y6lclr6v6"))))
(build-system cmake-build-system)
(arguments
'(#:test-target "test"))

66
gnu/packages/maths.scm
View File

@ -83,6 +83,7 @@
#:use-module (gnu packages python)
#:use-module (gnu packages readline)
#:use-module (gnu packages tbb)
#:use-module (gnu packages scheme)
#:use-module (gnu packages shells)
#:use-module (gnu packages tcl)
#:use-module (gnu packages texinfo)
@ -142,14 +143,14 @@ interactive dialogs to guide them.")
(define-public coda
(package
(name "coda")
(version "2.17.3")
(version "2.18")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/stcorp/coda/releases/download/"
version "/coda-" version ".tar.gz"))
(sha256
(base32 "04b9l3wzcix0mnfq77mwnil6cbr8h2mki8myvy0lzn236qcwaq1h"))
(base32 "11asla1ap8vd73farqjlpb179sfiy0biydcwxjfcakrp9sf8v9bs"))
(patches (search-patches "coda-use-system-libs.patch"))
(modules '((guix build utils)))
(snippet
@ -923,7 +924,7 @@ can solve two kinds of problems:
(define-public octave
(package
(name "octave")
(version "4.2.0")
(version "4.2.1")
(source
(origin
(method url-fetch)
@ -931,7 +932,7 @@ can solve two kinds of problems:
version ".tar.lz"))
(sha256
(base32
"19vvliwxgip0af812vny5xy5r8kacyj7v62203mh4z2n3p14b78i"))))
"09zhhch79jw3ynw39vizx0i2cbd2bjz3sp38pjdzraqrbivpwp92"))))
(build-system gnu-build-system)
(inputs
`(("lapack" ,lapack)
@ -2008,7 +2009,9 @@ point numbers.")
(define-public wxmaxima
(package
(name "wxmaxima")
(version "16.12.2")
;; Versions 16.12.0 to 16.12.2 have a bug which causes output lines to
;; overlap. See <https://debbugs.gnu.org/25793>
(version "16.04.2")
(source
(origin
(method url-fetch)
@ -2016,7 +2019,7 @@ point numbers.")
version "/" name "-" version ".tar.gz"))
(sha256
(base32
"0y22zhyhyxj2cbhzvs9c4pxr44i55ryfy5xi96d39bg2nbgs9h22"))))
"1fpqzk1921isiqrpgpf433ldq41924qs9sy99fl1zn5661b2l73n"))))
(build-system gnu-build-system)
(inputs
`(("wxwidgets" ,wxwidgets)
@ -2956,3 +2959,54 @@ algorithm for LCS. It is a fast program to compute the approximate
Longest Commons Subsequence of a set of strings.")
(home-page "https://github.com/gdv/Reduce-Expand-for-LCS")
(license license:gpl3+))))
(define-public jacal
(package
(name "jacal")
(version "1c4")
(source (origin
(method url-fetch)
(uri (string-append
"http://groups.csail.mit.edu/mac/ftpdir/scm/jacal-"
version ".zip"))
(sha256 (base32
"055zrn12a1dmy0dqkwrkq3fklbhg3yir6vn0lacp4mvbg8573a3q"))
(patches (search-patches "jacal-fix-texinfo.patch"))))
(build-system gnu-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'pre-build
;; Don't use upstream's script - it really doesn't fit into
;; Guix's functional paradigm.
(lambda* (#:key inputs outputs #:allow-other-keys)
(substitute* "Makefile"
(("^install: install-script") "install: "))))
(add-after 'install 'post-install
;; Instead, we provide our own simplified script.
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((wrapper (string-append (assoc-ref outputs "out")
"/bin/jacal")))
(format (open wrapper (logior O_WRONLY O_CREAT))
(string-append "#!~a\nexec ~a/bin/scm -ip1 "
"-e '(slib:load \"~a/lib/jacal/math\") "
"(math)' \"$@\"\n")
(which "bash")
(assoc-ref inputs "scm")
(assoc-ref outputs "out"))
(chmod wrapper #o555))))
(replace 'configure
(lambda* (#:key inputs outputs #:allow-other-keys)
(zero? (system* "./configure"
(string-append "--prefix="
(assoc-ref outputs "out")))))))))
(inputs `(("scm" ,scm)))
(native-inputs `(("unzip" ,unzip)
("texinfo" ,texinfo)))
(synopsis "Symbolic mathematics system")
(description "GNU JACAL is an interactive symbolic mathematics program based on
Scheme. It manipulate and simplify a range of mathematical expressions such
as equations, scalars, vectors, and matrices.")
(home-page "http://www.gnu.org/software/jacal")
(license license:gpl3+)))

7
gnu/packages/messaging.scm
View File

@ -495,14 +495,14 @@ end-to-end encryption support; XML console.")
(define-public prosody
(package
(name "prosody")
(version "0.9.10")
(version "0.9.12")
(source (origin
(method url-fetch)
(uri (string-append "https://prosody.im/downloads/source/"
"prosody-" version ".tar.gz"))
(sha256
(base32
"0bv6s5c0iizz015hh1lxlwlw1iwvisywajm2rcrbdfyrskzfwdj8"))))
"139yxqpinajl32ryrybvilh54ddb1q6s0ajjhlcs4a0rnwia6n8s"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no "check" target
@ -572,8 +572,7 @@ end-to-end encryption support; XML console.")
("lua5.1-expat" ,lua5.1-expat)
("lua5.1-socket" ,lua5.1-socket)
("lua5.1-filesystem" ,lua5.1-filesystem)
;; See <https://prosody.im/doc/depends#luasec>.
("lua5.1-sec" ,lua5.1-sec-0.5)))
("lua5.1-sec" ,lua5.1-sec)))
(home-page "https://prosody.im/")
(synopsis "Jabber (XMPP) server")
(description "Prosody is a modern XMPP communication server. It aims to

9
gnu/packages/mp3.scm
View File

@ -230,7 +230,7 @@ pre-defined or user-specifiable output format.")
(define-public libmp3splt
(package
(name "libmp3splt")
(version "0.8.1a")
(version "0.9.2")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/mp3splt/libmp3splt/"
@ -238,7 +238,7 @@ pre-defined or user-specifiable output format.")
version ".tar.gz"))
(sha256
(base32
"0d20r1bd4fgp9kp7w3qixjgll34czck9dgw59mx2kbhb0mhh00d8"))))
"1p1mn2hsmj5cp40fnc8g1yfvk72p8pjxi866gjdkgjsqrr7xdvih"))))
(build-system gnu-build-system)
(inputs `(("libid3tag" ,libid3tag)
("libmad" ,libmad)
@ -263,7 +263,7 @@ This package contains the library.")
(define-public mp3splt
(package
(name "mp3splt")
(version "2.5.1")
(version "2.6.2")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/mp3splt/mp3splt/"
@ -271,8 +271,9 @@ This package contains the library.")
version ".tar.gz"))
(sha256
(base32
"106dnka56prlc9nsfh300f8841am2lmkwlzgl9lkr25mgnc35wwh"))))
"1aiv20gypb6r84qabz8gblk8vi42cg3x333vk2pi3fyqvl82phry"))))
(build-system gnu-build-system)
(native-inputs `(("pkg-config" ,pkg-config)))
(inputs `(("libmp3splt" ,libmp3splt)))
(synopsis "Utility for splitting mp3 and ogg vorbis files")
(description

2
gnu/packages/music.scm
View File

@ -2061,6 +2061,8 @@ detailed track info including timbre, pitch, rhythm and loudness information.
(base32
"0bml11gfkxqd3i2jxkn5k2xllc4rvxjcyhs8an05gcyy1zp2bwvb"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Requires unpackaged python-flaky.
(native-inputs
`(("python-coverage" ,python-coverage)
("python-mock" ,python-mock)

13
gnu/packages/nano.scm
View File

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2012 Nikita Karetnikov <nikita@karetnikov.org>
;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Rene Saavedra <rennes@openmailbox.org>
;;;
;;; This file is part of GNU Guix.
@ -29,7 +29,7 @@
(define-public nano
(package
(name "nano")
(version "2.7.4")
(version "2.7.5")
(source
(origin
(method url-fetch)
@ -37,7 +37,7 @@
version ".tar.gz"))
(sha256
(base32
"135wzlv77p9za8679j2jpfkpvainvyagrhkdxngp71ynabgc5zr3"))))
"01yrh66rph0vn9q9r2d2jji5yzaakxrj75j9fsm0g41m8qpy4sr2"))))
(build-system gnu-build-system)
(inputs
`(("gettext" ,gettext-minimal)
@ -45,7 +45,8 @@
(home-page "https://www.nano-editor.org/")
(synopsis "Small, user-friendly console text editor")
(description
"GNU Nano is a small and simple text editor. In addition to basic
editing, it supports interactive search and replace, go to line and column
number, auto-indentation and more.")
"GNU nano is a small and simple text editor for use in a terminal. Besides
basic editing, it supports: undo/redo, syntax highlighting, spell checking,
justifying, auto-indentation, bracket matching, interactive search-and-replace
(with regular expressions), and the editing of multiple files.")
(license gpl3+))) ; some files are under GPLv2+

34
gnu/packages/networking.scm
View File

@ -11,6 +11,7 @@
;;; Copyright © 2016, 2017 ng0 <ng0@libertad.pw>
;;; Copyright © 2016 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2016 Benz Schenk <benz.schenk@uzh.ch>
;;; Copyright © 2016, 2017 Pjotr Prins <pjotr.guix@thebird.nl>
;;;
;;; This file is part of GNU Guix.
;;;
@ -430,7 +431,7 @@ and up to 1 Mbit/s downstream.")
(define-public whois
(package
(name "whois")
(version "5.2.14")
(version "5.2.15")
(source
(origin
(method url-fetch)
@ -438,7 +439,7 @@ and up to 1 Mbit/s downstream.")
name "_" version ".tar.xz"))
(sha256
(base32
"1lmh7168yby1ma8r1svgvmv9hbgjyniy9c64r6lby3zdmd0sy7d4"))))
"123ingf699javzh8qm6ny10nl28zbjzasa4k5pcn0qzw1dlnnnks"))))
(build-system gnu-build-system)
;; TODO: unbundle mkpasswd binary + its po files.
(arguments
@ -469,7 +470,7 @@ which can be used to encrypt a password with @code{crypt(3)}.")
(define-public wireshark
(package
(name "wireshark")
(version "2.2.4")
(version "2.2.5")
(synopsis "Network traffic analyzer")
(source
(origin
@ -478,7 +479,7 @@ which can be used to encrypt a password with @code{crypt(3)}.")
version ".tar.bz2"))
(sha256
(base32
"049r5962yrajhhz9r4dsnx403dab50d6091y2mw298ymxqszp9s2"))))
"1j4sc3pmy8l6k41007spglcqiabjlzc7f85pn3jmjr9ksv9qipbm"))))
(build-system glib-or-gtk-build-system)
(inputs `(("bison" ,bison)
("c-ares" ,c-ares)
@ -1006,14 +1007,14 @@ that block port 22.")
(define-public iperf
(package
(name "iperf")
(version "3.1.3")
(version "3.1.7")
(source (origin
(method url-fetch)
(uri (string-append "http://downloads.es.net/pub/iperf"
"/iperf-" version ".tar.gz"))
(sha256
(base32
"1gwmhm29zlp5grrpglmqj7vgx19s6xy33hk6hpbn8jnpn5lxpn30"))))
"0kvk8d0a3dcxc8fisyprbn01y8akxj4sx8ld5dh508p9dx077vx4"))))
(build-system gnu-build-system)
(synopsis "TCP, UDP and SCTP bandwidth measurement tool")
(description
@ -1119,3 +1120,24 @@ IPFIX, RSPAN, CLI, LACP, 802.1ag).")
license:gpl2 ; datapath
license:bsd-2 license:bsd-3
license:asl2.0)))) ; all other
(define-public speedtest-cli
(package
(name "speedtest-cli")
(version "1.0.2")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/sivel/speedtest-cli/archive/v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1ir9fqwr7cl9kfq7dgh9vkydkwf59wsx0cwbzbffw8i313xhzxa1"))))
(build-system python-build-system)
(home-page "https://github.com/sivel/speedtest-cli")
(synopsis "Internet bandwidth tester")
(description
"Command line interface for testing internet bandwidth using
speedtest.net.")
(license license:asl2.0)))

143
gnu/packages/openstack.scm
View File

@ -19,6 +19,7 @@
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages openstack)
#:use-module (gnu packages gnupg)
#:use-module (gnu packages python)
#:use-module (gnu packages ssh)
#:use-module (gnu packages tls)
@ -64,10 +65,16 @@
To do this Bandit processes each file, builds an AST from it, and runs
appropriate plugins against the AST nodes. Once Bandit has finished scanning
all the files it generates a report.")
(properties `((python2-variant . ,(delay python2-bandit))))
(license asl2.0)))
(define-public python2-bandit
(package-with-python2 python-bandit))
(package (inherit (package-with-python2
(strip-python2-variant python-bandit)))
(arguments
`(#:python ,python-2
;; FIXME: 'subunit.run discover: error: no such option: --list'
#:tests? #f))))
(define-public python-debtcollector
(package
@ -81,6 +88,8 @@ all the files it generates a report.")
(base32
"0g4dfskaiy47rhsh4gh66l5vmdsrgq0qk68pl3ix1cj3ffvfndzv"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ;FIXME: Requires packaging python-doc8.
(propagated-inputs
`(("python-six" ,python-six)
("python-wrapt" ,python-wrapt)))
@ -113,6 +122,9 @@ manner.")
(base32
"1a310k3dv04jg7zvmk37h2ql7y9kf4hvdxb74bjlwdxgmy6h4wap"))))
(build-system python-build-system)
(arguments
;; TODO: Requires unpackaged 'eventlet'.
'(#:tests? #f))
(propagated-inputs
`(("python-flake8-2.2.4" ,python-flake8-2.2.4)
("python-mccabe-0.2.1" ,python-mccabe-0.2.1)
@ -146,9 +158,14 @@ guidelines}.")
(base32
"0njmh40i1lg5mzn9hc2ax83adj6dli455j6xifilrw27c4wlkjzx"))))
(build-system python-build-system)
(arguments
;; TODO: Resolve dependency cycle and re-enable.
'(#:tests? #f))
(native-inputs
`(("python-fixtures" ,python-fixtures)
; TODO re-add ("python-oslosphinx" ,python-oslosphinx)
("python-pbr" ,python-pbr)
("python-sphinx" ,python-sphinx)
("python-testtools" ,python-testtools)))
(home-page "http://www.openstack.org/")
(synopsis "Mock object framework for Python")
@ -234,14 +251,14 @@ tested on Python version 3.2, 2.7 and 2.6.")
(define-public python-requests-mock
(package
(name "python-requests-mock")
(version "1.0.0")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "requests-mock" version))
(sha256
(base32
"0gcjjwsckhqixyffflc54i59x41jnbb37bli077vabii1bjmkin6"))))
"0jr997dvk6zbmhvbpcv3rajrgag69mcsm1ai3w3rgk2jdh6rg1mx"))))
(build-system python-build-system)
(propagated-inputs
`(("python-requests" ,python-requests)
@ -260,10 +277,16 @@ tested on Python version 3.2, 2.7 and 2.6.")
(description
"This module provides a building block to stub out the HTTP requests
portions of your testing code.")
(properties `((python2-variant . ,(delay python2-requests-mock))))
(license asl2.0)))
(define-public python2-requests-mock
(package-with-python2 python-requests-mock))
(package (inherit (package-with-python2
(strip-python2-variant python-requests-mock)))
(arguments
`(#:python ,python-2
;; FIXME: 'subunit.run discover: error: no such option: --list'
#:tests? #f))))
(define-public python-stevedore
(package
@ -282,10 +305,13 @@ portions of your testing code.")
(native-inputs
`(("python-pbr" ,python-pbr)
;; Tests
("python-discover" ,python-discover)
("python-docutils" ,python-docutils)
("python-mock" ,python-mock)
("python-oslosphinx" ,python-oslosphinx)
("python-oslotest" ,python-oslotest)
("python-sphinx" ,python-sphinx)))
("python-sphinx" ,python-sphinx)
("python-testrepository" ,python-testrepository)))
(home-page "https://github.com/dreamhost/stevedore")
(synopsis "Manage dynamic plugins for Python applications")
(description
@ -297,10 +323,16 @@ mechanism by building on top of setuptools entry points. The code for managing
entry points tends to be repetitive, though, so stevedore provides manager
classes for implementing common patterns for using dynamically loaded
extensions.")
(properties `((python2-variant . ,(delay python2-stevedore))))
(license asl2.0)))
(define-public python2-stevedore
(package-with-python2 python-stevedore))
(package (inherit (package-with-python2
(strip-python2-variant python-stevedore)))
(arguments
`(#:python ,python-2
;; FIXME: 'subunit.run discover: error: no such option: --list'
#:tests? #f))))
(define-public python-tempest-lib
(package
@ -315,7 +347,8 @@ extensions.")
"1cpp2vwmawpd29hjsklsps181lq2ah91cl412qvpnz228nf9sqn5"))))
(build-system python-build-system)
(arguments
`(#:phases
`(#:tests? #f ; FIXME: Requires oslo.log >= 1.14.0.
#:phases
(modify-phases %standard-phases
(add-before
'check 'pre-check
@ -362,6 +395,8 @@ common features used in Tempest.")
(base32
"13r778jfb0fhna37c2pd1f2xipnsbd7zli7qhn96acrzymrwj5k1"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Requires packaging python-argparse.
(propagated-inputs
`(("python-netaddr" ,python-netaddr)
("python-six" ,python-six)
@ -395,11 +430,19 @@ common features used in Tempest.")
(base32
"0kvha0rs9295njyl2z6n6zm5dapi5mrl5zwjm0m6ldqrvccyf8c3"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Requires python-mock >= 1.2.
(native-inputs
`(("python-babel" ,python-babel)
("python-pbr" ,python-pbr)
;; Tests.
("python-oslotest" ,python-oslotest)))
("python-coverage" ,python-coverage)
("python-hacking" ,python-hacking)
("python-mock" ,python-mock)
("python-os-client-config" ,python-os-client-config)
("python-oslotest" ,python-oslotest)
("python-oslosphinx" ,python-oslosphinx)
("python-sphinx" ,python-sphinx)))
(home-page "http://launchpad.net/oslo")
(synopsis "Oslo context library")
(description
@ -423,6 +466,8 @@ pipeline and used by various modules such as logging.")
(base32
"0bpb1c20sm8my650gl824nzaip83bfn8hr91s65k5ncmyh8hb6pl"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Circular dependency on python-oslo.config.
(propagated-inputs
`(("python-babel" ,python-babel)
("python-six" ,python-six)))
@ -459,6 +504,8 @@ in an application or library.")
(base32
"1fhy6yvbd565nv4x4i3ppyrlbmz3yy9d0xsvw5nkqsa7g43nmf8z"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Requires oslo.utils >= 3.2.0.
(propagated-inputs
`(("python-debtcollector" ,python-debtcollector)
("python-oslo.config" ,python-oslo.config)
@ -496,6 +543,8 @@ handlers and support for context specific logging (like resource id’s etc).")
(base32
"00s03krhf833gs76aw5ns32w9m1i4hx6x6d9g82m0j5wyqk0sci4"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Requires python-oslo.utils >= 3.2.0.
(propagated-inputs
`(("python-iso8601" ,python-iso8601)
("python-netaddr" ,python-netaddr)
@ -520,18 +569,74 @@ in transmittable and storable formats, such as JSON and MessagePack.")
(define-public python2-oslo.serialization
(package-with-python2 python-oslo.serialization))
(define-public python-reno
(package
(name "python-reno")
(version "2.0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "reno" version))
(sha256
(base32 "1i2wnn5fnm3jm5774pahg000q0lma5i913hml91bbbm2mybphndd"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'init-git
(lambda _
;; reno expects a git repo
(zero? (system* "git" "init")))))))
(propagated-inputs
`(("python-babel" ,python-babel)
("python-dulwich" ,python-dulwich)
("python-pyyaml" ,python-pyyaml)
("python-six" ,python-six)))
(native-inputs
`(("python-testtools" ,python-testtools)
("python-pbr" ,python-pbr)
("python-testscenarios" ,python-testscenarios)
("python-testrepository" ,python-testrepository)
("python-mock" ,python-mock)
("python-oslotest" ,python-oslotest)
("gnupg" ,gnupg)
("git" ,git)))
(home-page "http://docs.openstack.org/developer/reno/")
(synopsis "Release notes manager")
(description "Reno is a tool for storing release notes in a git repository
and building documentation from them.")
(properties `((python2-variant . ,(delay python2-reno))))
(license asl2.0)))
(define-public python2-reno
(package (inherit (package-with-python2
(strip-python2-variant python-reno)))
(arguments
`(#:python ,python-2
;; FIXME: 'subunit.run discover: error: no such option: --list'
#:tests? #f))))
(define-public python-oslosphinx
(package
(name "python-oslosphinx")
(version "4.3.0")
(version "4.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "oslosphinx" version))
(sha256
(base32
"0cz8ym4i1n4rgljlqhyhfkpgdmid7nkb909k8r8nk186m9cmpla2"))))
"09mxqyabi68f3s3arvdhlhq0mn38vf74jbsfcg84151hcj6czhnl"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; Note: Upstream tests would have also built the release notes.
;; That only would work if we were in a git checkout.
;; Therefore, we don't do it here.
(zero? (system* "python" "setup.py" "build_sphinx")))))))
(propagated-inputs
`(("python-requests" ,python-requests)))
(native-inputs
@ -581,10 +686,16 @@ from the OpenStack project.")
(description
"The Oslo Test framework provides common fixtures, support for debugging,
and better support for mocking results.")
(properties `((python2-variant . ,(delay python2-oslotest))))
(license asl2.0)))
(define-public python2-oslotest
(package-with-python2 python-oslotest))
(package (inherit (package-with-python2
(strip-python2-variant python-oslotest)))
(arguments
`(#:python ,python-2
;; FIXME: 'subunit.run discover: error: no such option: --list'
#:tests? #f))))
(define-public python-oslo.utils
(package
@ -603,6 +714,8 @@ and better support for mocking results.")
;; phase.
(delete-file "oslo_utils/tests/test_netutils.py")))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Requires oslo.config >= 2.7.0.
(propagated-inputs
`(("python-debtcollector" ,python-debtcollector)
("python-oslo.i18n" ,python-oslo.i18n)
@ -616,6 +729,8 @@ and better support for mocking results.")
`(("python-babel" ,python-babel)
("python-pbr" ,python-pbr)
;; Tests.
("python-bandit" ,python-bandit)
("python-oslo.config" ,python-oslo.config)
("python-oslotest" ,python-oslotest)
("python-mock" ,python-mock)
("python-mox3" ,python-mox3)
@ -643,6 +758,8 @@ handling.")
(base32
"1w4csvkah67rfpxylxnvs2s3594i0f9isy8pf4gnsqs5zirvjaa4"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Many tests are failing.
(native-inputs
`(("python-sphinx" ,python-sphinx)
;; and some packages for the tests
@ -749,6 +866,10 @@ permanence.")
(define-public python2-swiftclient
(let ((swiftclient (package-with-python2 python-swiftclient)))
(package (inherit swiftclient)
(arguments
`(#:python ,python-2
;; FIXME: subunit.run discover: error: no such option: --list
#:tests? #f))
(propagated-inputs
`(("python2-futures" ,python2-futures)
("python2-requests" ,python2-requests)

17
gnu/packages/package-management.scm
View File

@ -219,9 +219,9 @@ the Nix package manager.")
;;
;; Note: use a very short commit id; with a longer one, the limit on
;; hash-bang lines would be exceeded while running the tests.
(let ((commit "d9da3a757d3081403081577c4e07763c9b809043"))
(let ((commit "1162418ee88f155f6b14fd8926479c2176e40e76"))
(package (inherit guix-0.12.0)
(version (string-append "0.12.0-4." (string-take commit 4)))
(version (string-append "0.12.0-5." (string-take commit 4)))
(source (origin
(method git-fetch)
(uri (git-reference
@ -231,7 +231,7 @@ the Nix package manager.")
(commit commit)))
(sha256
(base32
"17w9jdzm3lvfbchx7qrlkczp2jsfsi6v8cpfqh290cip5gxgz9bn"))
"16pxqbywhayazdgg9l19frigncmyq20j5fvaq4zgvm0iidndhfja"))
(file-name (string-append "guix-" version "-checkout"))))
(arguments
(substitute-keyword-arguments (package-arguments guix-0.12.0)
@ -445,13 +445,13 @@ transactions from C or Python.")
(define-public diffoscope
(package
(name "diffoscope")
(version "63")
(version "77")
(source (origin
(method url-fetch)
(uri (pypi-uri name version))
(sha256
(base32
"12q5d2nszql1g4jf2ss863v0wpvvhrkaivqzhy6af9m9zwvw0p0k"))))
"0wrb6pl88611frxj19kq3vikhbld40fy1ncrskb1iayxsmbfcbn9"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
@ -464,12 +464,7 @@ transactions from C or Python.")
(("'python-magic',") ""))))
(add-after 'unpack 'embed-tool-references
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "diffoscope/difference.py"
(("@tool_required\\('colordiff'\\)") "")
(("\\[\"colordiff\"")
(string-append "[\"" (which "colordiff") "\"")))
(substitute* "diffoscope/comparators/utils.py"
(("@tool_required\\('xxd'\\)") "")
(substitute* "diffoscope/comparators/utils/compare.py"
(("\\['xxd',")
(string-append "['" (which "xxd") "',")))
(substitute* "diffoscope/comparators/elf.py"

9
gnu/packages/password-utils.scm
View File

@ -32,6 +32,7 @@
#:use-module (guix packages)
#:use-module (gnu packages)
#:use-module (gnu packages admin)
#:use-module (gnu packages aidc)
#:use-module (gnu packages base)
#:use-module (gnu packages compression)
#:use-module (gnu packages glib)
@ -282,7 +283,7 @@ any X11 window.")
(define-public password-store
(package
(name "password-store")
(version "1.6.5")
(version "1.7")
(source (origin
(method url-fetch)
(uri
@ -290,7 +291,7 @@ any X11 window.")
name "-" version ".tar.xz"))
(sha256
(base32
"05bk3lrp5jwg0v338lvylp7glpliydzz4jf5pjr6k3kagrv3jyik"))))
"002mw7j0m33bw483rllzhcf41wp3ixka8yma6kqrfaj57jyw66hn"))))
(build-system gnu-build-system)
(arguments
'(#:phases
@ -302,7 +303,7 @@ any X11 window.")
(let ((out (assoc-ref outputs "out"))
(path (map (lambda (pkg)
(string-append (assoc-ref inputs pkg) "/bin"))
'("coreutils" "getopt" "git" "gnupg" "pwgen"
'("coreutils" "getopt" "git" "gnupg" "qrencode"
"sed" "tree" "which" "xclip"))))
(wrap-program (string-append out "/bin/pass")
`("PATH" ":" prefix (,(string-join path ":"))))
@ -325,7 +326,7 @@ any X11 window.")
`(("getopt" ,util-linux)
("git" ,git)
("gnupg" ,gnupg)
("pwgen" ,pwgen)
("qrencode" ,qrencode)
("sed" ,sed)
("tree" ,tree)
("which" ,which)

22
gnu/packages/patches/arb-ldconfig.patch
View File

@ -1,22 +0,0 @@
diff -u -r arb-2.8.1.orig/configure arb-2.8.1/configure
--- arb-2.8.1.orig/configure 2015-12-31 17:30:01.000000000 +0100
+++ arb-2.8.1/configure 2016-01-20 16:41:41.336726596 +0100
@@ -647,6 +647,7 @@
echo "ARB_SHARED=$SHARED" >> Makefile
echo "ARB_LIB=$ARB_LIB" >> Makefile
echo "ARB_LIBNAME=$ARB_LIBNAME" >> Makefile
+echo "ARB_MAJOR=$ARB_MAJOR" >> Makefile
echo "ARB_SOLIB=$ARB_SOLIB" >> Makefile
echo "EXEEXT=$EXEEXT" >> Makefile
echo "PREFIX=$PREFIX" >> Makefile
diff -u -r arb-2.8.1.orig/Makefile.in arb-2.8.1/Makefile.in
--- arb-2.8.1.orig/Makefile.in 2015-12-31 17:30:01.000000000 +0100
+++ arb-2.8.1/Makefile.in 2016-01-20 16:30:32.575298517 +0100
@@ -101,6 +101,7 @@
$(LDCONFIG) -n "$(CURDIR)"; \
fi
ln -sf "$(ARB_LIB)" "$(ARB_LIBNAME)"; \
+ ln -sf "$(ARB_LIB)" "$(ARB_LIBNAME).$(ARB_MAJOR)"; \
libarb.a: $(OBJS) $(LIB_SOURCES) $(EXT_SOURCES) $(HEADERS) $(EXT_HEADERS) | build build/interfaces
$(AT)$(foreach ext, $(EXTENSIONS), $(foreach dir, $(patsubst $(ext)/%.h, %, $(wildcard $(ext)/*.h)), mkdir -p build/$(dir); BUILD_DIR=$(CURDIR)/build/$(dir); export BUILD_DIR; MOD_DIR=$(dir); export MOD_DIR; $(MAKE) -f $(CURDIR)/Makefile.subdirs -C $(ext)/$(dir) static || exit $$?;))

67
gnu/packages/patches/gnupg-2.1-fix-Y2038-test-failure.patch Normal file
View File

@ -0,0 +1,67 @@
Fix a Y2038 test failure on systems where time_t is a signed 32-bit value:
https://bugs.gnupg.org/gnupg/issue2988
Patch copied from upstream source repository:
https://git.gnupg.org/cgi-bin/gitweb.cgi?p=gnupg.git;a=commit;h=de3838372ae3cdecbd83eea2c53c8e2656d93052
From de3838372ae3cdecbd83eea2c53c8e2656d93052 Mon Sep 17 00:00:00 2001
From: Justus Winter <justus@g10code.com>
Date: Tue, 7 Mar 2017 12:18:59 +0100
Subject: [PATCH] tests: Avoid overflowing signed 32 bit time_t.
* tests/openpgp/quick-key-manipulation.scm: Use expiration times in
the year 2038 instead of 2105 to avoid overflowing 32 bit time_t.
time_t is used internally to parse the expiraton time from the iso
timestamp.
GnuPG-bug-id: 2988
Signed-off-by: Justus Winter <justus@g10code.com>
---
tests/openpgp/quick-key-manipulation.scm | 15 +++++++++++----
1 file changed, 11 insertions(+), 4 deletions(-)
diff --git a/tests/openpgp/quick-key-manipulation.scm b/tests/openpgp/quick-key-manipulation.scm
index 10f0bfe21..08ef62613 100755
--- a/tests/openpgp/quick-key-manipulation.scm
+++ b/tests/openpgp/quick-key-manipulation.scm
@@ -125,8 +125,13 @@
(default default never)
(rsa "sign auth encr" "seconds=600") ;; GPGME uses this
(rsa "auth,encr" "2") ;; "without a letter, days is assumed"
- (rsa "sign" "2105-01-01") ;; "last year GnuPG can represent is 2105"
- (rsa "sign" "21050101T115500") ;; "last year GnuPG can represent is 2105"
+ ;; Sadly, the timestamp is truncated by the use of time_t on
+ ;; systems where time_t is a signed 32 bit value.
+ (rsa "sign" "2038-01-01") ;; unix millennium
+ (rsa "sign" "20380101T115500") ;; unix millennium
+ ;; Once fixed, we can use later timestamps:
+ ;; (rsa "sign" "2105-01-01") ;; "last year GnuPG can represent is 2105"
+ ;; (rsa "sign" "21050101T115500") ;; "last year GnuPG can represent is 2105"
(rsa sign "2d")
(rsa1024 sign "2w")
(rsa2048 encr "2m")
@@ -157,7 +162,8 @@
(lambda (subkey)
(assert (= 1 (:alg subkey)))
(assert (string-contains? (:cap subkey) "s"))
- (assert (time-matches? 4260207600 ;; 2105-01-01
+ (assert (time-matches? 2145916800 ;; 2038-01-01
+ ;; 4260207600 ;; 2105-01-01
(string->number (:expire subkey))
;; This is off by 12h, but I guess it just
;; choses the middle of the day.
@@ -165,7 +171,8 @@
(lambda (subkey)
(assert (= 1 (:alg subkey)))
(assert (string-contains? (:cap subkey) "s"))
- (assert (time-matches? 4260254100 ;; UTC 2105-01-01 11:55:00
+ (assert (time-matches? 2145959700 ;; UTC 2038-01-01 11:55:00
+ ;; 4260254100 ;; UTC 2105-01-01 11:55:00
(string->number (:expire subkey))
(minutes->seconds 5))))
(lambda (subkey)
--
2.12.0

32
gnu/packages/patches/gst-plugins-base-fix-test-on-32bit.patch
View File

@ -1,32 +0,0 @@
This fixes a test failure on i686.
Patch copied from upstream source repository:
https://cgit.freedesktop.org/gstreamer/gst-plugins-base/commit/?id=5e2e111627871c566ffc6607eda8f4ef4699d040
From 5e2e111627871c566ffc6607eda8f4ef4699d040 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Sebastian=20Dr=C3=B6ge?= <sebastian@centricular.com>
Date: Thu, 2 Feb 2017 14:56:39 +0200
Subject: [PATCH] multifdsink: Make sure to use a 64 bit integer for the
units-max property
---
tests/check/elements/multifdsink.c | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/tests/check/elements/multifdsink.c b/tests/check/elements/multifdsink.c
index af138cc92..951b1b9fa 100644
--- a/tests/check/elements/multifdsink.c
+++ b/tests/check/elements/multifdsink.c
@@ -869,7 +869,7 @@ GST_START_TEST (test_client_kick)
gint i, initial_buffers = 3, num_buffers = 0;
sink = setup_multifdsink ();
- g_object_set (sink, "units-max", initial_buffers, NULL);
+ g_object_set (sink, "units-max", (gint64) initial_buffers, NULL);
fail_if (pipe (pfd1) == -1);
fail_if (pipe (pfd2) == -1);
--
2.11.0

92
gnu/packages/patches/jacal-fix-texinfo.patch Normal file
View File

@ -0,0 +1,92 @@
Fix the broken Texinfo in the Jacal package documentation
--- jacal/jacal.texi,orig 2017-02-23 20:35:55.303980444 +0100
+++ jacal/jacal.texi 2017-02-23 20:53:14.539024674 +0100
@@ -343,7 +343,7 @@
With the standard input grammar, the precedence of @samp{-} as a prefix
behaves strangely. @code{a^-b*c} becomes @code{a^(-b*c)} while
-@code{@result{a^b*c} (a^b)*c}.
+@code{a^b*c @result{} (a^b)*c}.
Using @code{divide} to divide a polynomial by an integer does not work.
@@ -675,8 +675,9 @@
e1: ---------
a
@end example
+@end deffn
-@deffnx Command suchthat var exp
+@deffn Command suchthat var exp
If an expression rather than an equation is given to @code{suchthat}, it
is as though the equation @code{@var{exp}=0} was given.
@@ -688,8 +689,9 @@
e2: ---------
a
@end example
+@end deffn
-@deffnx Operator | var exp_or_eqn
+@deffn Operator | var exp_or_eqn
An alternative infix notation is also available for @code{suchthat}.
@@ -857,8 +859,9 @@
Returns the degree of polynomial or equation @var{poly} in variable
@var{var}.
+@end deffn
-@deffnx Operator degree poly
+@deffn Operator degree poly
Returns the total-degree, the degree of its highest degree monomial,
of polynomial or equation @var{poly}.
@@ -1016,10 +1019,12 @@
Returns @var{poly1} reduced with respect to @var{poly2} (or @var{eqn})
and @var{var}. If @var{poly2} is univariate, the third argument is not
needed.
+@end deffn
-@deffnx Command mod poly1 n
+@deffn Command mod poly1 n
Returns @var{poly1} with all the coefficients taken modulo @var{n}.
-@deffnx Command mod poly1
+@end deffn
+@deffn Command mod poly1
Returns @var{poly1} with all the coefficients taken modulo the
current modulus.
@@ -1220,8 +1225,9 @@
e1: -1 2 3 5
@end group
@end example
+@end deffn
-@deffnx Command factor polyratio
+@deffn Command factor polyratio
Given a univariate ratio of polynomials @var{polyratio}, returns a
matrix of factors and exponents.
@@ -2028,7 +2034,7 @@
formed from the pair-wise products of components of the inputs. For
example, for the input tensors @code{x[a,b]} and @code{y[c]}
@example
-@result{z:tmult(x,y);} z[a,b,c] = x[a,b]*y[c]
+z:tmult(x,y); @result{} z[a,b,c] = x[a,b]*y[c]
@end example
With an additional argument, @code{tmult} will produce the inner product
@@ -2464,8 +2470,9 @@
If you do not wish to return to Jacal but really want to terminate the
session and return to the operating system, then after typing
@code{qed();}, type @code{(slib:exit)} or use @code{quit}.
+@end deffn
-@deffnx Command quit
+@deffn Command quit
Exit directly from Jacal to the operating system. You will not be able
to continue your Jacal session.

53
gnu/packages/patches/kio-CVE-2017-6410.patch Normal file
View File

@ -0,0 +1,53 @@
Fix CVE-2017-6410, "Information Leak when accessing https when using a
malicious PAC file":
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-6410
https://www.kde.org/info/security/advisory-20170228-1.txt
Patch copied from upstream source repository:
https://cgit.kde.org/kio.git/commit/?id=f9d0cb47cf94e209f6171ac0e8d774e68156a6e4
From f9d0cb47cf94e209f6171ac0e8d774e68156a6e4 Mon Sep 17 00:00:00 2001
From: Albert Astals Cid <aacid@kde.org>
Date: Tue, 28 Feb 2017 19:00:48 +0100
Subject: Sanitize URLs before passing them to FindProxyForURL
Remove user/password information
For https: remove path and query
Thanks to safebreach.com for reporting the problem
CCMAIL: yoni.fridburg@safebreach.com
CCMAIL: amit.klein@safebreach.com
CCMAIL: itzik.kotler@safebreach.com
---
src/kpac/script.cpp | 11 +++++++++--
1 file changed, 9 insertions(+), 2 deletions(-)
diff --git a/src/kpac/script.cpp b/src/kpac/script.cpp
index a0235f7..2485c54 100644
--- a/src/kpac/script.cpp
+++ b/src/kpac/script.cpp
@@ -754,9 +754,16 @@ QString Script::evaluate(const QUrl &url)
}
}
+ QUrl cleanUrl = url;
+ cleanUrl.setUserInfo(QString());
+ if (cleanUrl.scheme() == QLatin1String("https")) {
+ cleanUrl.setPath(QString());
+ cleanUrl.setQuery(QString());
+ }
+
QScriptValueList args;
- args << url.url();
- args << url.host();
+ args << cleanUrl.url();
+ args << cleanUrl.host();
QScriptValue result = func.call(QScriptValue(), args);
if (result.isError()) {
--
cgit v0.11.2

77
gnu/packages/patches/libssh-0.6.5-CVE-2016-0739.patch
View File

@ -1,77 +0,0 @@
Fix CVE-2016-0739 (Weak Diffie-Hellman secret generation in
dh_generate_x() and dh_generate_y()).
"Due to a byte/bit confusion, the DH secret was too short. This file was
completely reworked and will be commited in a future version."
Source:
https://git.libssh.org/projects/libssh.git/commit/?id=f8d0026c65fc8a55748ae481758e2cf376c26c86
This patch was created by upstream for libssh-0.7.3, but applied without
modification to libssh-0.6.3 by Debian. In Guix, we apply it without
modification to libssh-0.6.5.
References:
https://bugzilla.redhat.com/show_bug.cgi?id=CVE-2016-0739
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-0739
https://security-tracker.debian.org/tracker/CVE-2016-0739
---
src/dh.c | 22 +++++++++++++++++-----
1 file changed, 17 insertions(+), 5 deletions(-)
diff --git a/src/dh.c b/src/dh.c
index e489a1d..d27b66e 100644
--- a/src/dh.c
+++ b/src/dh.c
@@ -227,15 +227,21 @@ void ssh_crypto_finalize(void) {
}
int dh_generate_x(ssh_session session) {
+ int keysize;
+ if (session->next_crypto->kex_type == SSH_KEX_DH_GROUP1_SHA1) {
+ keysize = 1023;
+ } else {
+ keysize = 2047;
+ }
session->next_crypto->x = bignum_new();
if (session->next_crypto->x == NULL) {
return -1;
}
#ifdef HAVE_LIBGCRYPT
- bignum_rand(session->next_crypto->x, 128);
+ bignum_rand(session->next_crypto->x, keysize);
#elif defined HAVE_LIBCRYPTO
- bignum_rand(session->next_crypto->x, 128, 0, -1);
+ bignum_rand(session->next_crypto->x, keysize, -1, 0);
#endif
/* not harder than this */
@@ -248,15 +254,21 @@ int dh_generate_x(ssh_session session) {
/* used by server */
int dh_generate_y(ssh_session session) {
- session->next_crypto->y = bignum_new();
+ int keysize;
+ if (session->next_crypto->kex_type == SSH_KEX_DH_GROUP1_SHA1) {
+ keysize = 1023;
+ } else {
+ keysize = 2047;
+ }
+ session->next_crypto->y = bignum_new();
if (session->next_crypto->y == NULL) {
return -1;
}
#ifdef HAVE_LIBGCRYPT
- bignum_rand(session->next_crypto->y, 128);
+ bignum_rand(session->next_crypto->y, keysize);
#elif defined HAVE_LIBCRYPTO
- bignum_rand(session->next_crypto->y, 128, 0, -1);
+ bignum_rand(session->next_crypto->y, keysize, -1, 0);
#endif
/* not harder than this */
--
cgit v0.12

34
gnu/packages/patches/matplotlib-setupext-tk.patch
View File

@ -1,34 +0,0 @@
Use 'pkg-config' instead of heuristics to find 'tk' flags.
--- matplotlib-1.4.3/setupext.py.orig 2015-12-01 14:21:19.554417453 +0100
+++ matplotlib-1.4.3/setupext.py 2015-12-02 10:39:47.282363530 +0100
@@ -1457,7 +1457,7 @@
p = subprocess.Popen(
'. %s ; eval echo ${%s}' % (file, varname),
shell=True,
- executable="/bin/sh",
+ executable="sh",
stdout=subprocess.PIPE)
result = p.communicate()[0]
return result.decode('ascii')
@@ -1601,8 +1601,19 @@
# of distros.
# Query Tcl/Tk system for library paths and version string
+ def getoutput(s):
+ ret = os.popen(s).read().strip()
+ return ret
try:
- tcl_lib_dir, tk_lib_dir, tk_ver = self.query_tcltk()
+ pkg_config_libs = getoutput('pkg-config --libs-only-L tk').split()
+ # drop '-L' part of strings
+ pkg_config_libs = [s[2:] for s in pkg_config_libs]
+ pkg_config_ver = getoutput('pkg-config --modversion tk')
+ tk_ver = re.match(r"(\d+.\d+)[\d.]*", pkg_config_ver).group(1)
+ tcl_lib_dir = next(s for s in pkg_config_libs
+ if re.match(r".*-tcl-.*", s)) + '/tcl' + tk_ver
+ tk_lib_dir = next(s for s in pkg_config_libs
+ if re.match(r".*-tk-.*", s)) + '/tk' + tk_ver
except:
tk_ver = ''
result = self.hardcoded_tcl_config()

63
gnu/packages/patches/mupdf-CVE-2017-5896.patch Normal file
View File

@ -0,0 +1,63 @@
Fix CVE-2017-5896:
https://bugs.ghostscript.com/show_bug.cgi?id=697515
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-5896
http://www.openwall.com/lists/oss-security/2017/02/10/1
https://security-tracker.debian.org/tracker/CVE-2017-5896
https://blogs.gentoo.org/ago/2017/02/09/mupdf-use-after-free-in-fz_subsample_pixmap-pixmap-c/
Patch lifted from upstream source repository:
http://git.ghostscript.com/?p=mupdf.git;h=2c4e5867ee699b1081527bc6c6ea0e99a35a5c27
From 2c4e5867ee699b1081527bc6c6ea0e99a35a5c27 Mon Sep 17 00:00:00 2001
From: Robin Watts <Robin.Watts@artifex.com>
Date: Thu, 9 Feb 2017 07:12:16 -0800
Subject: [PATCH] bug 697515: Fix out of bounds read in fz_subsample_pixmap
Pointer arithmetic for final special case was going wrong.
---
source/fitz/pixmap.c | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/source/fitz/pixmap.c b/source/fitz/pixmap.c
index a8317127..f1291dc2 100644
--- a/source/fitz/pixmap.c
+++ b/source/fitz/pixmap.c
@@ -1104,6 +1104,7 @@ fz_subsample_pixmap_ARM(unsigned char *ptr, int w, int h, int f, int factor,
"@STACK:r1,<9>,factor,n,fwd,back,back2,fwd2,divX,back4,fwd4,fwd3,divY,back5,divXY\n"
"ldr r4, [r13,#4*22] @ r4 = divXY \n"
"ldr r5, [r13,#4*11] @ for (nn = n; nn > 0; n--) { \n"
+ "ldr r8, [r13,#4*17] @ r8 = back4 \n"
"18: @ \n"
"mov r14,#0 @ r14= v = 0 \n"
"sub r5, r5, r1, LSL #8 @ for (xx = x; xx > 0; x--) { \n"
@@ -1120,7 +1121,7 @@ fz_subsample_pixmap_ARM(unsigned char *ptr, int w, int h, int f, int factor,
"mul r14,r4, r14 @ r14= v *= divX \n"
"mov r14,r14,LSR #16 @ r14= v >>= 16 \n"
"strb r14,[r9], #1 @ *d++ = r14 \n"
- "sub r0, r0, r8 @ s -= back2 \n"
+ "sub r0, r0, r8 @ s -= back4 \n"
"subs r5, r5, #1 @ n-- \n"
"bgt 18b @ } \n"
"21: @ \n"
@@ -1249,6 +1250,7 @@ fz_subsample_pixmap(fz_context *ctx, fz_pixmap *tile, int factor)
x += f;
if (x > 0)
{
+ int back4 = x * n - 1;
div = x * y;
for (nn = n; nn > 0; nn--)
{
@@ -1263,7 +1265,7 @@ fz_subsample_pixmap(fz_context *ctx, fz_pixmap *tile, int factor)
s -= back5;
}
*d++ = v / div;
- s -= back2;
+ s -= back4;
}
}
}
--
2.12.0

101
gnu/packages/patches/mupdf-CVE-2017-5991.patch Normal file
View File

@ -0,0 +1,101 @@
Fix CVE-2017-5991:
https://bugs.ghostscript.com/show_bug.cgi?id=697500
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-5991
https://security-tracker.debian.org/tracker/CVE-2017-5991
Patch lifted from upstream source repository:
http://git.ghostscript.com/?p=mupdf.git;h=1912de5f08e90af1d9d0a9791f58ba3afdb9d465
From 1912de5f08e90af1d9d0a9791f58ba3afdb9d465 Mon Sep 17 00:00:00 2001
From: Robin Watts <robin.watts@artifex.com>
Date: Thu, 9 Feb 2017 15:49:15 +0000
Subject: [PATCH] Bug 697500: Fix NULL ptr access.
Cope better with errors during rendering - avoid letting the
gstate stack get out of sync.
This avoids us ever getting into the situation of popping
a clip when we should be popping a mask or a group. This was
causing an unexpected case in the painting.
---
source/pdf/pdf-op-run.c | 26 ++++++++++++++++++--------
1 file changed, 18 insertions(+), 8 deletions(-)
diff --git a/source/pdf/pdf-op-run.c b/source/pdf/pdf-op-run.c
index a3ea895d..f1eac8d3 100644
--- a/source/pdf/pdf-op-run.c
+++ b/source/pdf/pdf-op-run.c
@@ -1213,6 +1213,7 @@ pdf_run_xobject(fz_context *ctx, pdf_run_processor *proc, pdf_xobject *xobj, pdf
pdf_run_processor *pr = (pdf_run_processor *)proc;
pdf_gstate *gstate = NULL;
int oldtop = 0;
+ int oldbot = -1;
fz_matrix local_transform = *transform;
softmask_save softmask = { NULL };
int gparent_save;
@@ -1232,16 +1233,17 @@ pdf_run_xobject(fz_context *ctx, pdf_run_processor *proc, pdf_xobject *xobj, pdf
fz_var(cleanup_state);
fz_var(gstate);
fz_var(oldtop);
+ fz_var(oldbot);
gparent_save = pr->gparent;
pr->gparent = pr->gtop;
+ oldtop = pr->gtop;
fz_try(ctx)
{
pdf_gsave(ctx, pr);
gstate = pr->gstate + pr->gtop;
- oldtop = pr->gtop;
pdf_xobject_bbox(ctx, xobj, &xobj_bbox);
pdf_xobject_matrix(ctx, xobj, &xobj_matrix);
@@ -1302,12 +1304,25 @@ pdf_run_xobject(fz_context *ctx, pdf_run_processor *proc, pdf_xobject *xobj, pdf
doc = pdf_get_bound_document(ctx, xobj->obj);
+ oldbot = pr->gbot;
+ pr->gbot = pr->gtop;
+
pdf_process_contents(ctx, (pdf_processor*)pr, doc, resources, xobj->obj, NULL);
}
fz_always(ctx)
{
+ /* Undo any gstate mismatches due to the pdf_process_contents call */
+ if (oldbot != -1)
+ {
+ while (pr->gtop > pr->gbot)
+ {
+ pdf_grestore(ctx, pr);
+ }
+ pr->gbot = oldbot;
+ }
+
if (cleanup_state >= 3)
- pdf_grestore(ctx, pr); /* Remove the clippath */
+ pdf_grestore(ctx, pr); /* Remove the state we pushed for the clippath */
/* wrap up transparency stacks */
if (transparency)
@@ -1341,13 +1356,8 @@ pdf_run_xobject(fz_context *ctx, pdf_run_processor *proc, pdf_xobject *xobj, pdf
pr->gstate[pr->gparent].ctm = gparent_save_ctm;
pr->gparent = gparent_save;
- if (gstate)
- {
- while (oldtop < pr->gtop)
- pdf_grestore(ctx, pr);
-
+ while (oldtop < pr->gtop)
pdf_grestore(ctx, pr);
- }
pdf_unmark_obj(ctx, xobj->obj);
}
--
2.12.0

4
gnu/packages/patches/nss-pkgconfig.patch
View File

@ -221,5 +221,5 @@ Later adapted to apply cleanly to nss-3.21.
RELEASE = nss
-DIRS = coreconf lib cmd external_tests
+DIRS = coreconf lib cmd external_tests config
-DIRS = coreconf lib cmd gtests
+DIRS = coreconf lib cmd gtests config

179
gnu/packages/patches/pcre2-CVE-2016-3191.patch
View File

@ -1,179 +0,0 @@
Fixes CVE-2016-3191 (remote execution of arbitrary code or denial of
service (stack-based buffer overflow) via a crafted regular expression).
See <https://bugzilla.redhat.com/show_bug.cgi?id=1311503>.
This is svn r489 at <svn://vcs.exim.org/pcre2/code>, omitting the
changes to 'testdata/testoutput8-16-4', which does not exist in the
source tarball.
git-svn-id: svn://vcs.exim.org/pcre2/code/trunk@489 6239d852-aaf2-0410-a92c-79f79f948069
---
ChangeLog | 4 ++++
src/pcre2_compile.c | 16 ++++++++++++++--
testdata/testinput8 | 2 ++
testdata/testoutput8-16-2 | 3 +++
testdata/testoutput8-16-3 | 3 +++
testdata/testoutput8-16-4 | 3 +++
testdata/testoutput8-32-2 | 3 +++
testdata/testoutput8-32-3 | 3 +++
testdata/testoutput8-32-4 | 3 +++
testdata/testoutput8-8-2 | 3 +++
testdata/testoutput8-8-3 | 3 +++
testdata/testoutput8-8-4 | 3 +++
12 files changed, 47 insertions(+), 2 deletions(-)
diff --git a/ChangeLog b/ChangeLog
index 3ce0207..65e333e 100644
--- a/ChangeLog
+++ b/ChangeLog
@@ -58,6 +58,10 @@ some head-scratching the next time this happens.
assertion, caused pcre2test to output a very large number of spaces when the
callout was taken, making the program appearing to loop.
+12. A pattern that included (*ACCEPT) in the middle of a sufficiently deeply
+nested set of parentheses of sufficient size caused an overflow of the
+compiling workspace (which was diagnosed, but of course is not desirable).
+
Version 10.21 12-January-2016
-----------------------------
diff --git a/src/pcre2_compile.c b/src/pcre2_compile.c
index e33d620..887fbfd 100644
--- a/src/pcre2_compile.c
+++ b/src/pcre2_compile.c
@@ -5901,10 +5901,22 @@ for (;; ptr++)
goto FAILED;
}
cb->had_accept = TRUE;
+
+ /* In the first pass, just accumulate the length required;
+ otherwise hitting (*ACCEPT) inside many nested parentheses can
+ cause workspace overflow. */
+
for (oc = cb->open_caps; oc != NULL; oc = oc->next)
{
- *code++ = OP_CLOSE;
- PUT2INC(code, 0, oc->number);
+ if (lengthptr != NULL)
+ {
+ *lengthptr += CU2BYTES(1) + IMM2_SIZE;
+ }
+ else
+ {
+ *code++ = OP_CLOSE;
+ PUT2INC(code, 0, oc->number);
+ }
}
setverb = *code++ =
(cb->assert_depth > 0)? OP_ASSERT_ACCEPT : OP_ACCEPT;
diff --git a/testdata/testinput8 b/testdata/testinput8
index ca3b1b9..7e2a1f0 100644
--- a/testdata/testinput8
+++ b/testdata/testinput8
@@ -182,4 +182,6 @@
/((?1)(?2)(?3)(?4)(?5)(?6)(?7)(?8)(?9)(?9)(?8)(?7)(?6)(?5)(?4)(?3)(?2)(?1)(?0)){2,}()()()()()()()()()/debug
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+
# End of testinput8
diff --git a/testdata/testoutput8-16-2 b/testdata/testoutput8-16-2
index 05669bb..a5e8dec 100644
--- a/testdata/testoutput8-16-2
+++ b/testdata/testoutput8-16-2
@@ -1027,4 +1027,7 @@ Capturing subpattern count = 10
May match empty string
Subject length lower bound = 0
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+Failed: error 186 at offset 490: regular expression is too complicated
+
# End of testinput8
diff --git a/testdata/testoutput8-16-3 b/testdata/testoutput8-16-3
index 31884e1..36133b3 100644
--- a/testdata/testoutput8-16-3
+++ b/testdata/testoutput8-16-3
@@ -1023,4 +1023,7 @@ Capturing subpattern count = 10
May match empty string
Subject length lower bound = 0
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+Failed: error 114 at offset 509: missing closing parenthesis
+
# End of testinput8
diff --git a/testdata/testoutput8-32-2 b/testdata/testoutput8-32-2
index babd0c7..99c4fad 100644
--- a/testdata/testoutput8-32-2
+++ b/testdata/testoutput8-32-2
@@ -1023,4 +1023,7 @@ Capturing subpattern count = 10
May match empty string
Subject length lower bound = 0
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+Failed: error 114 at offset 509: missing closing parenthesis
+
# End of testinput8
diff --git a/testdata/testoutput8-32-3 b/testdata/testoutput8-32-3
index babd0c7..99c4fad 100644
--- a/testdata/testoutput8-32-3
+++ b/testdata/testoutput8-32-3
@@ -1023,4 +1023,7 @@ Capturing subpattern count = 10
May match empty string
Subject length lower bound = 0
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+Failed: error 114 at offset 509: missing closing parenthesis
+
# End of testinput8
diff --git a/testdata/testoutput8-32-4 b/testdata/testoutput8-32-4
index babd0c7..99c4fad 100644
--- a/testdata/testoutput8-32-4
+++ b/testdata/testoutput8-32-4
@@ -1023,4 +1023,7 @@ Capturing subpattern count = 10
May match empty string
Subject length lower bound = 0
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+Failed: error 114 at offset 509: missing closing parenthesis
+
# End of testinput8
diff --git a/testdata/testoutput8-8-2 b/testdata/testoutput8-8-2
index 6a9aa0a..6dc1f42 100644
--- a/testdata/testoutput8-8-2
+++ b/testdata/testoutput8-8-2
@@ -1026,4 +1026,7 @@ Capturing subpattern count = 10
May match empty string
Subject length lower bound = 0
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+Failed: error 114 at offset 509: missing closing parenthesis
+
# End of testinput8
diff --git a/testdata/testoutput8-8-3 b/testdata/testoutput8-8-3
index 2fe1168..ae14946 100644
--- a/testdata/testoutput8-8-3
+++ b/testdata/testoutput8-8-3
@@ -1024,4 +1024,7 @@ Capturing subpattern count = 10
May match empty string
Subject length lower bound = 0
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+Failed: error 114 at offset 509: missing closing parenthesis
+
# End of testinput8
diff --git a/testdata/testoutput8-8-4 b/testdata/testoutput8-8-4
index 91993b2..6c79956 100644
--- a/testdata/testoutput8-8-4
+++ b/testdata/testoutput8-8-4
@@ -1022,4 +1022,7 @@ Capturing subpattern count = 10
May match empty string
Subject length lower bound = 0
+/([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00]([00](*ACCEPT)/
+Failed: error 114 at offset 509: missing closing parenthesis
+
# End of testinput8
--
2.8.3

41
gnu/packages/patches/python-dendropy-fix-tests.patch Normal file
View File

@ -0,0 +1,41 @@
This patch fixes two test failures. It was downloaded from:
https://github.com/jeetsukumaran/DendroPy/commit/93f984bba7a6c588a28ca87f4e557ce283809453
From 93f984bba7a6c588a28ca87f4e557ce283809453 Mon Sep 17 00:00:00 2001
From: jeetsukumaran <jeetsukumaran@gmail.com>
Date: Tue, 21 Feb 2017 16:41:01 -0500
Subject: [PATCH] Update to Python 3 container and iteration semantics
---
dendropy/dataio/newickreader.py | 3 ++-
dendropy/datamodel/treemodel.py | 3 +++
2 files changed, 5 insertions(+), 1 deletion(-)
diff --git a/dendropy/dataio/newickreader.py b/dendropy/dataio/newickreader.py
index 6dcf3c5..f978729 100644
--- a/dendropy/dataio/newickreader.py
+++ b/dendropy/dataio/newickreader.py
@@ -303,7 +303,8 @@ def tree_iter(self,
taxon_symbol_map_fn=taxon_symbol_mapper.require_taxon_for_symbol)
yield tree
if tree is None:
- raise StopIteration
+ # raise StopIteration
+ return
def _read(self,
stream,
diff --git a/dendropy/datamodel/treemodel.py b/dendropy/datamodel/treemodel.py
index 0ecfe31..73146f0 100644
--- a/dendropy/datamodel/treemodel.py
+++ b/dendropy/datamodel/treemodel.py
@@ -772,6 +772,9 @@ def __hash__(self):
def __eq__(self, other):
return self is other
+ def __lt__(self, other):
+ return id(self) < id(other)
+
###########################################################################
### Basic Structure

36
gnu/packages/patches/python-fake-factory-fix-build-32bit.patch Normal file
View File

@ -0,0 +1,36 @@
These tests fail on 32-bit due to an overflow.
Upstream bug URL: https://github.com/joke2k/faker/issues/408
diff --git a/faker/tests/__init__.py b/faker/tests/__init__.py
index 6026772..58b6b83 100644
--- a/faker/tests/__init__.py
+++ b/faker/tests/__init__.py
@@ -384,7 +384,6 @@ class FactoryTestCase(unittest.TestCase):
provider = Provider
# test century
self.assertTrue(self._datetime_to_time(provider.date_time_this_century(after_now=False)) <= self._datetime_to_time(datetime.datetime.now()))
- self.assertTrue(self._datetime_to_time(provider.date_time_this_century(before_now=False, after_now=True)) >= self._datetime_to_time(datetime.datetime.now()))
# test decade
self.assertTrue(self._datetime_to_time(provider.date_time_this_decade(after_now=False)) <= self._datetime_to_time(datetime.datetime.now()))
self.assertTrue(self._datetime_to_time(provider.date_time_this_decade(before_now=False, after_now=True)) >= self._datetime_to_time(datetime.datetime.now()))
@@ -413,8 +412,6 @@ class FactoryTestCase(unittest.TestCase):
# ensure all methods provide timezone aware datetimes
with self.assertRaises(TypeError):
- provider.date_time_this_century(before_now=False, after_now=True, tzinfo=utc) >= datetime.datetime.now()
- with self.assertRaises(TypeError):
provider.date_time_this_decade(after_now=False, tzinfo=utc) <= datetime.datetime.now()
with self.assertRaises(TypeError):
provider.date_time_this_year(after_now=False, tzinfo=utc) <= datetime.datetime.now()
@@ -423,7 +420,6 @@ class FactoryTestCase(unittest.TestCase):
# test century
self.assertTrue(provider.date_time_this_century(after_now=False, tzinfo=utc) <= datetime.datetime.now(utc))
- self.assertTrue(provider.date_time_this_century(before_now=False, after_now=True, tzinfo=utc) >= datetime.datetime.now(utc))
# test decade
self.assertTrue(provider.date_time_this_decade(after_now=False, tzinfo=utc) <= datetime.datetime.now(utc))
self.assertTrue(provider.date_time_this_decade(before_now=False, after_now=True, tzinfo=utc) >= datetime.datetime.now(utc))
--
2.11.1

36
gnu/packages/patches/python-faker-fix-build-32bit.patch Normal file
View File

@ -0,0 +1,36 @@
These tests fail on 32-bit due to an overflow.
Upstream bug URL: https://github.com/joke2k/faker/issues/408
diff --git a/tests/__init__.py b/tests/__init__.py
index 6026772..58b6b83 100644
--- a/tests/__init__.py
+++ b/tests/__init__.py
@@ -384,7 +384,6 @@ class FactoryTestCase(unittest.TestCase):
provider = Provider
# test century
self.assertTrue(self._datetime_to_time(provider.date_time_this_century(after_now=False)) <= self._datetime_to_time(datetime.datetime.now()))
- self.assertTrue(self._datetime_to_time(provider.date_time_this_century(before_now=False, after_now=True)) >= self._datetime_to_time(datetime.datetime.now()))
# test decade
self.assertTrue(self._datetime_to_time(provider.date_time_this_decade(after_now=False)) <= self._datetime_to_time(datetime.datetime.now()))
self.assertTrue(self._datetime_to_time(provider.date_time_this_decade(before_now=False, after_now=True)) >= self._datetime_to_time(datetime.datetime.now()))
@@ -413,8 +412,6 @@ class FactoryTestCase(unittest.TestCase):
# ensure all methods provide timezone aware datetimes
with self.assertRaises(TypeError):
- provider.date_time_this_century(before_now=False, after_now=True, tzinfo=utc) >= datetime.datetime.now()
- with self.assertRaises(TypeError):
provider.date_time_this_decade(after_now=False, tzinfo=utc) <= datetime.datetime.now()
with self.assertRaises(TypeError):
provider.date_time_this_year(after_now=False, tzinfo=utc) <= datetime.datetime.now()
@@ -423,7 +420,6 @@ class FactoryTestCase(unittest.TestCase):
# test century
self.assertTrue(provider.date_time_this_century(after_now=False, tzinfo=utc) <= datetime.datetime.now(utc))
- self.assertTrue(provider.date_time_this_century(before_now=False, after_now=True, tzinfo=utc) >= datetime.datetime.now(utc))
# test decade
self.assertTrue(provider.date_time_this_decade(after_now=False, tzinfo=utc) <= datetime.datetime.now(utc))
self.assertTrue(provider.date_time_this_decade(before_now=False, after_now=True, tzinfo=utc) >= datetime.datetime.now(utc))
--
2.11.1

59
gnu/packages/patches/python-pandas-skip-failing-tests.patch Normal file
View File

@ -0,0 +1,59 @@
These tests fail on 32bit architectures.
Upstream bug URL: https://github.com/pandas-dev/pandas/issues/14866
--- a/pandas/tests/test_base.py 2017-03-08 17:49:44.422282717 +0100
+++ b/pandas/tests/test_base.py 2017-03-08 17:50:59.476701799 +0100
@@ -363,30 +363,6 @@
self.assertFalse(result.iat[0])
self.assertFalse(result.iat[1])
- def test_ndarray_compat_properties(self):
-
- for o in self.objs:
-
- # check that we work
- for p in ['shape', 'dtype', 'flags', 'T', 'strides', 'itemsize',
- 'nbytes']:
- self.assertIsNotNone(getattr(o, p, None))
- self.assertTrue(hasattr(o, 'base'))
-
- # if we have a datetimelike dtype then needs a view to work
- # but the user is responsible for that
- try:
- self.assertIsNotNone(o.data)
- except ValueError:
- pass
-
- self.assertRaises(ValueError, o.item) # len > 1
- self.assertEqual(o.ndim, 1)
- self.assertEqual(o.size, len(o))
-
- self.assertEqual(Index([1]).item(), 1)
- self.assertEqual(Series([1]).item(), 1)
-
def test_ops(self):
for op in ['max', 'min']:
for o in self.objs:
--- a/pandas/tools/tests/test_tile.py 2017-03-08 17:47:39.762261841 +0100
+++ b/pandas/tools/tests/test_tile.py 2017-03-08 17:48:26.831780495 +0100
@@ -271,19 +271,6 @@
np.array([0, 0, 1, 1], dtype=np.int8))
tm.assert_numpy_array_equal(bins, np.array([0, 1.5, 3]))
- def test_single_bin(self):
- # issue 14652
- expected = Series([0, 0])
-
- s = Series([9., 9.])
- result = cut(s, 1, labels=False)
- tm.assert_series_equal(result, expected)
-
- s = Series([-9., -9.])
- result = cut(s, 1, labels=False)
- tm.assert_series_equal(result, expected)
-
-
def curpath():
pth, _ = os.path.split(os.path.abspath(__file__))
return pth

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