gnu: Add r-scone.

* gnu/packages/bioconductor.scm (r-scone): New variable.
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Ricardo Wurmus 2019-03-13 13:14:40 +01:00
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commit f088775799
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@ -2083,3 +2083,43 @@ of differences between two conditions. The package also includes functions
for simulating data with these patterns from negative binomial
distributions.")
(license license:gpl2)))
(define-public r-scone
(package
(name "r-scone")
(version "1.6.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "scone" version))
(sha256
(base32
"0l1x4cjnfjbpx6k55sjqx03555daa6v63rq0rg6b7jpz8xxzwa7p"))))
(build-system r-build-system)
(propagated-inputs
`(("r-aroma-light" ,r-aroma-light)
("r-biocparallel" ,r-biocparallel)
("r-boot" ,r-boot)
("r-class" ,r-class)
("r-cluster" ,r-cluster)
("r-compositions" ,r-compositions)
("r-diptest" ,r-diptest)
("r-edger" ,r-edger)
("r-fpc" ,r-fpc)
("r-gplots" ,r-gplots)
("r-hexbin" ,r-hexbin)
("r-limma" ,r-limma)
("r-matrixstats" ,r-matrixstats)
("r-mixtools" ,r-mixtools)
("r-rarpack" ,r-rarpack)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rhdf5" ,r-rhdf5)
("r-ruvseq" ,r-ruvseq)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(home-page "https://bioconductor.org/packages/scone")
(synopsis "Single cell overview of normalized expression data")
(description
"SCONE is an R package for comparing and ranking the performance of
different normalization schemes for single-cell RNA-seq and other
high-throughput analyses.")
(license license:artistic2.0)))