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gnu: mash: Update to 2.0. 

* gnu/packages/bioinformatics.scm (mash): Update to 2.0.
This commit is contained in:
Ben Woodcroft 2018-03-04 10:32:56 +10:00
parent c7a8aa131d
commit f38ac742e6
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1 changed files with 5 additions and 3 deletions
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@ -3775,7 +3775,7 @@ sequences).")
(define-public mash (define-public mash
(package (package
(name "mash") (name "mash")
(version "1.1.1") (version "2.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
@ -3784,7 +3784,7 @@ sequences).")
(file-name (string-append name "-" version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"08znbvqq5xknfhmpp3wcj574zvi4p7i8zifi67c9qw9a6ikp42fj")) "00fx14vpmgsijwxd1xql3if934l82v8ckqgjjyyhnr36qb9qrskv"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
;; Delete bundled kseq. ;; Delete bundled kseq.
@ -3802,7 +3802,9 @@ sequences).")
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'unpack 'fix-includes (add-after 'unpack 'fix-includes
(lambda _ (lambda _
(substitute* '("src/mash/Sketch.cpp" "src/mash/CommandFind.cpp") (substitute* '("src/mash/Sketch.cpp"
"src/mash/CommandFind.cpp"
"src/mash/CommandScreen.cpp")
(("^#include \"kseq\\.h\"") (("^#include \"kseq\\.h\"")
"#include \"htslib/kseq.h\"")) "#include \"htslib/kseq.h\""))
#t)) #t))