From f794e85daa8c401ab22b5bdacd897ccf9ea3b266 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Sat, 2 Jun 2018 11:41:47 +0200 Subject: [PATCH] gnu: r-chippeakanno: Update to 3.14.0. * gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.0. [propagated-inputs]: Add r-biostrings, r-delayedarray, r-genomicranges, r-iranges, and r-s4vectors. --- gnu/packages/bioconductor.scm | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 16b5e71452..536349049c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -226,23 +226,27 @@ expressed genes in DNA microarray experiments.") (define-public r-chippeakanno (package (name "r-chippeakanno") - (version "3.12.7") + (version "3.14.0") (source (origin (method url-fetch) (uri (bioconductor-uri "ChIPpeakAnno" version)) (sha256 (base32 - "1zab489d7a6bh6ylc68x6yn47gdkmr7p3677grx9l2qafrryjr04")))) + "1kcnc3cnmrhdk1x7q3y6zsz09pgd3xn9xy1hfbxz48cajlb18ad0")))) (properties `((upstream-name . "ChIPpeakAnno"))) (build-system r-build-system) (propagated-inputs `(("r-biocgenerics" ,r-biocgenerics) + ("r-biostrings" ,r-biostrings) + ("r-delayedarray" ,r-delayedarray) ("r-go-db" ,r-go-db) ("r-biomart" ,r-biomart) ("r-bsgenome" ,r-bsgenome) ("r-genomicfeatures" ,r-genomicfeatures) + ("r-genomicranges" ,r-genomicranges) ("r-genomeinfodb" ,r-genomeinfodb) + ("r-iranges" ,r-iranges) ("r-matrixstats" ,r-matrixstats) ("r-annotationdbi" ,r-annotationdbi) ("r-limma" ,r-limma) @@ -254,6 +258,7 @@ expressed genes in DNA microarray experiments.") ("r-dbi" ,r-dbi) ("r-ensembldb" ,r-ensembldb) ("r-biobase" ,r-biobase) + ("r-s4vectors" ,r-s4vectors) ("r-seqinr" ,r-seqinr) ("r-idr" ,r-idr) ("r-genomicalignments" ,r-genomicalignments)