From fc3ebc3023f2c419ad07536de9211109c1bb2452 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Sat, 27 Apr 2019 20:44:43 +0200 Subject: [PATCH] gnu: r-ggbio: Fix build. * gnu/packages/bioinformatics.scm (r-ggbio)[arguments]: Add build phase to patch out typo. --- gnu/packages/bioinformatics.scm | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 4891bb15af..78d6fe8718 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9953,6 +9953,16 @@ effort and encourages consistency.") (base32 "0wq49qqzkcn8s19xgaxf2s1j1a563d7pbhhvris6fhxfdjsz4934")))) (build-system r-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; See https://github.com/tengfei/ggbio/issues/117 + ;; This fix will be included in the next release. + (add-after 'unpack 'fix-typo + (lambda _ + (substitute* "R/GGbio-class.R" + (("fechable") "fetchable")) + #t))))) (propagated-inputs `(("r-annotationdbi" ,r-annotationdbi) ("r-annotationfilter" ,r-annotationfilter)