ec2a67de88
gnu: Add python-dendropy.
...
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New
variables.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-07-09 08:00:34 +10:00
c11f79a49e
gnu: star: Restrict supported systems to 64-bit systems.
...
* gnu/packages/bioinformatics.scm (star)[supported-systems]: Restrict to
x86_64-linux and mips64el-linux.
2016-07-08 22:10:05 +10:00
71ca053928
gnu: rxvt-unicode: Update to 9.22.
...
* gnu/packages/xdisorg.scm (rxvt-unicode): Update to 9.22.
2016-07-07 20:46:29 -04:00
6c12abbdb2
services: nginx: Fix typo.
...
* gnu/services/web.scm (nginx-service): Fix typo.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-07 20:42:58 -04:00
614023981a
gnu: Add di.
...
* gnu/packages/admin.scm (di): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-07 20:38:49 -04:00
1a5fd02a82
gnu: getmail: Update to 4.49.0.
...
* gnu/packages/mail.scm (getmail): Update to 4.49.0.
2016-07-07 20:02:11 +03:00
a0b15f5eef
gnu: python-pyusb: Update to 1.0.0.
...
* gnu/packages/libusb.scm (python-pyusb): Update to 1.0.0.
2016-07-07 19:59:25 +03:00
6b810897a0
gnu: python-websocket-client: Update to 0.37.0.
...
* gnu/packages/python.scm (python-websocket-client): Update to 0.37.0.
[source]: Use pypi uri format.
2016-07-07 19:44:11 +03:00
697e86ddca
gnu: ansible: Update to 2.1.0.0.
...
* gnu/packages/admin.scm (ansible): Update to 2.1.0.0.
[source]: Use pypi format.
2016-07-07 18:59:28 +03:00
88535a4453
gnu: python-psutil: Update to 4.3.0.
...
* gnu/packages/python.scm (python-psutil): Update to 4.3.0.
[home-page]: Update home-page.
2016-07-07 17:38:20 +03:00
d285657eae
gnu: bedtools: Update to 2.26.0.
...
* gnu/packages/bioinformatics.scm (bedtools): Update to 2.26.0.
2016-07-07 23:27:19 +10:00
7c7643a7f0
gnu: diamond: Update to 0.8.11.
...
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.11.
2016-07-07 18:21:10 +08:00
0b166a7559
gnu: quassel: Build with modular qt.
...
* gnu/packages/irc.scm (quassel)[inputs]: Remove qt, add qtbase,
qttools, qtscript.
[arguments]: Disable webkit.
2016-07-07 12:23:39 +03:00
5f2074ca66
gnu: snorenotify: Build with modular qt.
...
* gnu/packages/kde.scm (snorenotify)[inputs]: Remove qt, add qtbase, qttools.
2016-07-07 12:23:39 +03:00
05b9c00e59
gnu: qca: Build with qtbase.
...
* gnu/packages/kde.scm (qca)[inputs]: Remove qt, add qtbase.
2016-07-07 12:23:39 +03:00
4742c4decc
gnu: Add qtscript.
...
* gnu/packages/qt.scm (qtscript): New variable.
2016-07-07 12:23:39 +03:00
66cf0f054d
gnu: Add r-domc.
...
* gnu/packages/statistics.scm (r-domc): New variable.
2016-07-07 10:46:39 +02:00
9003957e53
gnu: Add r-multitaper.
...
* gnu/packages/statistics.scm (r-multitaper): New variable.
2016-07-07 10:46:30 +02:00
274da826f9
gnu: Add r-seqinr.
...
* gnu/packages/bioinformatics.scm (r-seqinr): New variable.
2016-07-07 10:46:17 +02:00
fdd0f7b2a3
gnu: Add r-ade4.
...
* gnu/packages/statistics.scm (r-ade4): New variable.
2016-07-07 10:46:05 +02:00
939cf41c3f
gnu: python-oslosphinx: Update to 4.3.0.
...
* gnu/packages/openstack.scm (python-oslosphinx): Update to 4.3.0.
2016-07-07 06:54:06 +03:00
8157af2e09
gnu: khmer: Limit to x86_64 systems only.
...
* gnu/packages/bioinformatics.scm (khmer)[supported-systems]: New field.
2016-07-07 06:33:28 +03:00
25a814ceab
gnu: httpd: Update to 2.4.23.
...
Fixes CVE-2016-4979.
* gnu/packages/web.scm (httpd): Update to 2.4.23.
2016-07-06 14:37:46 -04:00
15ca556bbc
gnu: pumpa: Remove extra input.
...
* gnu/packages/pumpio.scm (pumpa)[inputs]: Remove qjson.
2016-07-06 21:22:36 +03:00
8f82641ac9
gnu: Add emacs-hl-todo.
...
* gnu/packages/emacs.scm (emacs-hl-todo): New variable.
2016-07-06 19:02:13 +02:00
41184943ae
gnu: Add emacs-ess.
...
* gnu/packages/emacs.scm (emacs-ess): New variable.
2016-07-06 13:25:50 +02:00
26112c0abb
gnu: python-numexpr: Update to 2.6.0.
...
* gnu/packages/python.scm (python-numexpr): Update to 2.6.0.
2016-07-06 12:02:18 +02:00
975cd29a98
gnu: r-ggplot2: Add r-svglite to propagated-inputs.
...
* gnu/packages/statistics.scm (r-ggplot2)[propagated-inputs]: Add
r-svglite.
2016-07-06 15:17:29 +08:00
3aebedcc02
gnu: Add r-svglite.
...
* gnu/packages/statistics.scm (r-svglite): New variable.
2016-07-06 15:17:29 +08:00
c5940b157e
gnu: Add r-gdtools.
...
* gnu/packages/statistics.scm (r-gdtools): New variable.
2016-07-06 15:17:29 +08:00
6baa83d283
gnu: sudo: Update to 1.8.17p1.
...
* gnu/packages/admin.scm (sudo): Update to 1.8.17p1.
[source]: Remove patch.
* gnu/packages/patches/sudo-CVE-2015-5602.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-07-06 07:28:09 +03:00
fda746b198
gnu: menu-cache: Update to 1.0.1.
...
* gnu/packages/lxde.scm (menu-cache): Update to 1.0.1.
2016-07-05 22:36:13 +03:00
d78c952dfd
gnu: lxtask: Update to 0.1.7.
...
* gnu/packages/lxde.scm (lxtask): Update to 0.1.7.
2016-07-05 22:33:20 +03:00
d7ec759a7a
gnu: lxrandr: Update to 0.3.1.
...
* gnu/packages/lxde.scm (lxrandr): Update to 0.3.1.
2016-07-05 22:30:38 +03:00
2c2a9ef79e
gnu: lxappearance: Update to 0.6.2.
...
* gnu/packages/lxde.scm (lxappearance): Update to 0.6.2.
2016-07-05 22:27:11 +03:00
5fb5dffbd4
gnu: Add multiqc.
...
* gnu/packages/bioinformatics.scm (multiqc): New variable.
2016-07-05 16:32:37 +02:00
091963c69b
gnu: Add perltidy.
...
* gnu/packages/perl.scm (perltidy): New variable.
2016-07-05 16:12:23 +02:00
1f1b20b8be
gnu: Add bits.
...
* gnu/packages/bioinformatics.scm (bits): New variable.
2016-07-05 15:43:36 +02:00
66e40e0065
gnu: Add EMBOSS.
...
* gnu/packages/bioinformatics.scm (emboss): New variable.
2016-07-05 12:32:12 +02:00
aae8ba4746
gnu: Add libharu.
...
* gnu/packages/pdf.scm (libharu): New variable.
2016-07-05 12:26:38 +02:00
5082eac957
gnu: Add perl-list-someutils.
...
* gnu/packages/perl.scm (perl-list-someutils): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:35 +02:00
8bcafb7440
gnu: Add perl-list-compare.
...
* gnu/packages/perl.scm (perl-list-compare): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:22 +02:00
056575421e
gnu: Add perl-io-captureoutput.
...
* gnu/packages/perl.scm (perl-io-captureoutput): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:04 +02:00
184497afec
build: Ignore texi2pdf temporary files.
...
* .gitignore: Modify.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:11:39 +02:00
b58cbf9ac5
services: Add rngd-service.
...
* gnu/services/base.scm (<rngd-configuration>): New record type.
(rngd-service-type): New variable.
(rngd-service): New procedure.
* doc/guix.texi (Base Services): Document it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:10:01 +02:00
cf91cfc0c4
gnu: testdisk: Update to 7.0.
...
* gnu/packages/admin.scm (testdisk): Update to 7.0.
2016-07-05 08:54:47 +02:00
d6a08ec0c6
gnu: testdisk: Add NTFS support.
...
* gnu/packages/admin.scm (testdisk)[inputs]: Add ntfs-3g.
2016-07-05 08:54:39 +02:00
0adc21c293
gnu: Add python2-pytest-cache.
...
* gnu/packages/python.scm (python2-pytest-cache): New variable.
(python-pytest-cache)[properties]: New field.
2016-07-04 22:47:15 +03:00
fa8af53e99
gnu: Add scrollkeeper.
...
* gnu/packages/documentation.scm (scrollkeeper): New variable.
2016-07-04 21:32:31 +02:00
42c4b24646
gnu: python2-pythondialog: Update to 3.4.0.
...
* gnu/packages/python.scm (python2-pythondialog): Update to 3.4.0.
[source]: Use pypi-uri.
Co-authored-by: Leo Famulari <leo@famulari.name>
2016-07-04 14:35:24 -04:00
Ben Woodcroft