939b6b113b
gnu: star: Update to 2.5.3a.
...
* gnu/packages/bioinformatics.scm (star): Update to 2.5.3a.
2017-03-23 11:21:08 +01:00
d5ceeb5a2d
gnu: scotch: Build with flex-2.6.1.
...
* gnu/packages/maths.scm (scotch)[native-inputs]: Use flex-2.6.1 and not
flex.
2017-03-23 07:32:31 +02:00
5302eba611
gnu: libffcall: Remove aarch64-linux from supported systems.
...
* gnu/packages/libffcall.scm (libffcall)[supported-systems]: New field,
remove aarch64-linux.
[home-page]: Use https.
2017-03-23 07:32:26 +02:00
b27bd0b057
gnu: youtube-dl: Update to 2017.03.22.
...
* gnu/packages/video.scm (youtube-dl): Update to 2017.03.22.
2017-03-23 02:53:18 +01:00
a06cd95ab0
gnu: python-natsort: Update to 5.0.2.
...
* gnu/packages/python.scm (python-natsort): Update to 5.0.2.
2017-03-23 02:53:17 +01:00
e17a12482b
gnu: python2-futures: Update to 3.0.5.
...
* gnu/packages/python.scm (python2-futures): Update to 3.0.5.
2017-03-23 02:53:17 +01:00
06fe79f263
gnu: python-rauth: Update to 0.7.3.
...
* gnu/packages/python.scm (python-rauth): Update to 0.7.3.
2017-03-23 02:53:17 +01:00
36e0d9db90
gnu: python-ipaddress: Update to 1.0.18.
...
* gnu/packages/python.scm (python-ipaddress): Update to 1.0.18.
2017-03-23 02:53:16 +01:00
543782e1ff
gnu: python-appdirs: Update to 1.4.3.
...
* gnu/packages/python.scm (python-appdirs): Update to 1.4.3.
2017-03-23 02:53:16 +01:00
80e8d8517a
gnu: python-beautifulsoup4: Update to 4.5.3.
...
* gnu/packages/python.scm (python-beautifulsoup4): Update to 4.5.3.
2017-03-23 02:53:15 +01:00
7c4279322e
gnu: python-drmaa: Update to 0.7.7.
...
* gnu/packages/python.scm (python-drmaa): Update to 0.7.7.
2017-03-23 02:53:15 +01:00
fd2662e950
gnu: python-sqlalchemy-utils: Update to 0.32.13.
...
* gnu/packages/python.scm (python-sqlalchemy-utils): Update to 0.32.13.
2017-03-23 02:53:15 +01:00
745d85b7db
gnu: python-pafy: Update to 0.5.3.1.
...
* gnu/packages/python.scm (python-pafy): Update to 0.5.3.1.
2017-03-23 02:53:14 +01:00
e20dafd0a1
gnu: gpsbabel: Fix a build failure with GCC 5.
...
* gnu/packages/gps.scm (gpsbabel)[arguments]: Add -fPIC to #:configure-flags.
2017-03-22 17:04:46 -04:00
283f04b053
gnu: libffcall: Set source file-name.
...
* gnu/packages/libffcall.scm (libffcall)[source]: Add file-name field.
[home-page]: Use https.
2017-03-22 22:36:43 +02:00
359e9c4215
gnu: chicken: Update to 4.12.0.
...
* gnu/packages/scheme.scm (chicken): Update to 4.12.0.
2017-03-22 15:31:17 -04:00
44cba47e93
gnu: wine: Build with flex-2.6.1.
...
* gnu/packages/wine.scm (wine)[native-inputs]: Use flex-2.6.1 and not
flex.
2017-03-22 21:06:46 +02:00
575a6f0f8a
gnu: binutils-vc4: Build with flex-2.6.1.
...
* gnu/packages/embedded.scm (binutils-vc4)[native-inputs]: Use
flex-2.6.1 and not flex.
2017-03-22 19:27:00 +02:00
112d645ffa
gnu: dovecot: Update to 2.2.28.
...
* gnu/packages/mail.scm (dovecot): Update to 2.2.28.
2017-03-22 13:04:29 -04:00
9b7a9580d4
gnu: rustc: Honor max line length.
...
* gnu/packages/rust.scm (rustc)[arguments]: patch-tests: Honor max line
length.
2017-03-22 17:41:44 +01:00
61a3137bdd
gnu: guix: Update development snapshot.
...
* gnu/packages/package-management.scm (guix-devel): Update to 73a4645
2017-03-22 16:05:46 +01:00
493ae57eca
gnu: binutils-vc4: Set source file-name.
...
* gnu/packages/embedded.scm (binutils-vc4)[source]: Add file-name field.
2017-03-22 16:10:45 +02:00
73a46451af
build: 'test-driver.scm' prints Scheme values with 'write'.
...
Previously it would print them with 'display', which was inconvenient.
* build-aux/test-driver.scm (test-display): Use ~S for VALUE.
(test-runner-gnu): Use 'format' instead of 'test-display' for the test
name, location, and result kind.
2017-03-22 15:02:33 +01:00
50b4d3ac26
tests: Skip 'guix pack' test when networking is unavailable.
...
* tests/pack.scm ("self-contained-tarball"): Skip unless (network-reachable?).
2017-03-22 15:02:33 +01:00
ed407f3ccc
tests: Fix 'cond-expand' clause for 2.2/2.0.
...
Fixes a mistake in a9a0227c01
2017-03-22 15:02:33 +01:00
dc8a34ed46
gnu: freeimage: Fix build with GCC 5.
...
* gnu/packages/patches/freeimage-fix-build-with-gcc-5.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (freeimage)[source]: Add patch.
2017-03-22 14:45:44 +01:00
aeb6fe5fa0
gnu: autoconf-archive: Update to 2017.03.21.
...
* gnu/packages/autotools.scm (autoconf-archive): Update to 2017.03.21.
2017-03-22 15:35:59 +02:00
4bb5e0aeb3
publish: Add '--nar-path'.
...
* guix/scripts/publish.scm (show-help, %options): Add '--nar-path'.
(%default-options): Add 'nar-path'.
(guix-publish): Honor it.
2017-03-22 14:05:59 +01:00
cdd7a7d210
publish: Make the nar URL prefix a parameter.
...
* guix/scripts/publish.scm (narinfo-string): Add #:nar-path and honor it.
(render-narinfo): Likewise.
(make-request-handler): Likewise.
(run-publish-server): Likewise.
* tests/publish.scm ("custom nar path"): New test.
2017-03-22 14:05:59 +01:00
46f58390cb
publish: Add '--public-key' and '--private-key'.
...
* guix/scripts/publish.scm (show-help, %options): Add --public-key and
--private-key.
* doc/guix.texi (Invoking guix publish): Document it.
2017-03-22 14:05:59 +01:00
ab2a74e4db
publish: The public and private keys are now SRFI-39 parameters.
...
* guix/scripts/publish.scm (%default-options): Add 'public-key-file' and
'private-key-file'.
(lazy-read-file-sexp): Remove.
(%private-key, %public-key): Turn into SRFI-39 parameters.
(signed-string, render-narinfo): Adjust accordingly.
(guix-publish): Honor 'public-key-file' and 'private-key-file' from
OPTS. Use 'parameterize'.
* guix/pk-crypto.scm (read-file-sexp): New procedure.
* tests/publish.scm: Initialize '%public-key' and '%private-key'.
2017-03-22 14:05:59 +01:00
5cd074ea32
gnu: guile: Add 'guile-next' as a deprecated alias.
...
This is a followup to f6396d862f
2017-03-22 14:05:58 +01:00
326249bab8
gnu: rustc: End resultless phases in #t.
...
* gnu/packages/rust.scm (rustc): End resultless phases in #t.
2017-03-22 12:59:32 +01:00
54262c5435
gnu: python-pysam: Run tests in parallel.
...
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Run nose tests in
parallel.
2017-03-22 12:33:28 +01:00
71dbf592c4
gnu: python-pysam: Run tests before installation.
...
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Adjust check
phase to be run before installation.
2017-03-22 12:33:28 +01:00
879b521cd0
gnu: python-pysam: Update to 0.10.0.
...
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.10.0.
2017-03-22 12:33:24 +01:00
d553cd6015
gnu: python-pysam: Run tests in parallel.
...
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Run nose tests in
parallel.
2017-03-22 12:21:39 +01:00
611154efc8
gnu: python-pysam: Run tests before installation.
...
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Adjust check
phase to be run before installation.
2017-03-22 12:21:39 +01:00
9488776a18
gnu: python-pysam: Update to 0.10.0.
...
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.10.0.
2017-03-22 12:21:38 +01:00
378de69c59
Merge remote-tracking branch 'origin/master' into core-updates
2017-03-22 12:57:37 +02:00
0e7c3ba1c0
gnu: perl-mojolicious: Update to 7.29.
...
* gnu/packages/perl-web.scm (perl-mojolicious): Update to 7.29.
2017-03-22 12:56:23 +02:00
c70b50efb9
gnu: perl-io-compress: Update to 2.074.
...
* gnu/packages/compression.scm (perl-io-compress): Update to 2.074.
[propagated-inputs]: Update minimum versions to 2.074.
2017-03-22 12:50:36 +02:00
c0b7b797a2
gnu: perl-compress-raw-bzip2: Update to 2.074.
...
* gnu/packages/compression.scm (perl-compress-raw-bzip2): Update to 2.074.
2017-03-22 12:45:55 +02:00
02b067d782
gnu: perl-compress-raw-zlib: Update to 2.074.
...
* gnu/packages/compression.scm (perl-compress-raw-zlib): Update to 2.074.
2017-03-22 12:40:05 +02:00
d8be338f16
gnu: openssh: Update to 7.5p1.
...
* gnu/packages/ssh.scm (openssh): Update to 7.5p1.
2017-03-22 02:37:31 -04:00
22f25392cf
gnu: ntp: Update to 4.2.8p10 [security fixes].
...
Fixes CVE-2016-9042 and CVE-2017-{6451,6452,6455,6458,6459,6460,6462,6463,6464}
and others. See 'NEWS' in the source code for more information.
* gnu/packages/ntp.scm (ntp): Update to 4.2.8p10.
2017-03-22 01:41:41 -04:00
8e71896340
gnu: python-psycopg2: Update to 2.6.2.
...
* gnu/packages/python.scm (python-psycopg2): Update to 2.6.2.
2017-03-22 02:03:35 +01:00
35e1a0f1a7
gnu: python-zope-component: Update to 4.3.0.
...
* gnu/packages/python.scm (python-zope-component): Update to 4.3.0.
[source]: Use pypi-uri.
2017-03-22 02:03:35 +01:00
c56ad5e291
gnu: python-atomicwrites: Update to 1.1.5.
...
* gnu/packages/python.scm (python-atomicwrites): Update to 1.1.5.
2017-03-22 02:03:34 +01:00
4c4d4df393
gnu: python-texttable: Update to 0.8.7.
...
* gnu/packages/python.scm (python-texttable): Update to 0.8.7.
2017-03-22 02:03:34 +01:00
Ricardo Wurmus