Commit Graph

20395 Commits

Author SHA1 Message Date
Petter 2a013d0f09
gnu: Add perl-carp-always.
* gnu/packages/perl.scm (perl-carp-always): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-25 10:49:38 +02:00
Petter fc4083c54f
gnu: Add perl-net-dbus-glib.
* gnu/packages/glib.scm (perl-net-dbus-glib): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-25 10:49:38 +02:00
Petter a372c4da2f
gnu: Add perl-net-dbus.
* gnu/packages/glib.scm (perl-net-dbus): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-25 10:49:37 +02:00
Eric Bavier 24404eaf93
gnu: dealii: Update to 8.5.1.
Fixes compilation with boost@1.64.0.

* gnu/packages/maths.scm (dealii): Update to 8.5.1.
2017-10-24 20:16:50 -05:00
Eric Bavier 4150da630f
gnu: p4est: Update to 2.0.
* gnu/packages/maths.scm (p4est): Update to 2.0.
2017-10-24 20:16:50 -05:00
Eric Bavier 9ce587f231
gnu: libhilbert: Remove package.
This package's source and webpage has disappeared for some time, and upstream
projects (e.g. libmesh) seem to be bundling it, so we remove it for now.

* gnu/packages/maths.scm (libhilbert): Remove variable.
2017-10-24 20:16:49 -05:00
Eric Bavier 958b5a1caa
gnu: slepc: Update to 3.8.0.
* gnu/packages/maths.scm (slepc): Update to 3.8.0.
2017-10-24 20:16:49 -05:00
Eric Bavier 6fec298d3e
gnu: petsc: Update to 3.8.0.
* gnu/packages/maths.scm (petsc): Update to 3.8.0
[native-inputs]: Remove perl, which is no longer needed.
2017-10-24 20:16:42 -05:00
Ben Woodcroft 6f141eff47
gnu: bwa: Update to 0.7.17.
* gnu/packages/bioinformatics.scm (bwa): Update to 0.7.17.
2017-10-25 09:29:22 +10:00
Ben Woodcroft ae6e00f6f9
gnu: bwa: Change source URL to GitHub.
* gnu/packages/bioinformatics.scm (bwa)[source]: Change source URL to
GitHub.
2017-10-25 09:29:22 +10:00
Petter 85c991b029
gnu: Add perl-moox-options.
* gnu/packages/perl.scm (perl-moox-options): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:25 +02:00
Ricardo Wurmus 68998abd4f
gnu: perl-getopt-long-descriptive: Update to 0.100.
* gnu/packages/perl.scm (perl-getopt-long-descriptive): Update to 0.100.
[native-inputs]: Add perl-cpan-meta-check.
2017-10-24 23:30:24 +02:00
Petter b936ddf312
gnu: Add perl-moox-configfromfile.
* gnu/packages/perl.scm (perl-moox-configfromfile): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:24 +02:00
Petter 8df39f572c
gnu: Add perl-moox-file-configdir.
* gnu/packages/perl.scm (perl-moox-file-configdir): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:24 +02:00
Petter 658a4976fa
gnu: Add perl-moox-cmd.
* gnu/packages/perl.scm (perl-moox-cmd): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:24 +02:00
Ricardo Wurmus b547ef1d09
gnu: perl-list-moreutils: Update to 0.426.
* gnu/packages/perl.scm (perl-list-moreutils): Update to 0.426.
[arguments]: Work around dotless @INC problem.
[native-inputs]: Add perl-test-leaktrace; remove perl-inc-latest and
perl-test-writevariants.
[propagated-inputs]: Add perl-list-moreutils-xs.
2017-10-24 23:30:24 +02:00
Ricardo Wurmus 189bfb1112
gnu: Add perl-list-moreutils-xs.
* gnu/packages/perl.scm (perl-list-moreutils-xs): New variable.
2017-10-24 23:30:24 +02:00
Petter 544dc8d46b
gnu: Add perl-libintl-perl.
* gnu/packages/perl.scm (perl-libintl-perl): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:23 +02:00
Petter 180411e3f4
gnu: Add perl-file-configdir.
* gnu/packages/perl.scm (perl-file-configdir): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:23 +02:00
Petter 987232e67d
gnu: Add perl-data-record.
* gnu/packages/perl.scm (perl-data-record): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:23 +02:00
Petter 8dca3bde0e
gnu: Add perl-data-printer.
* gnu/packages/perl.scm (perl-data-printer): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:23 +02:00
Petter 857d75388b
gnu: Add perl-clone-pp.
* gnu/packages/perl.scm (perl-clone-pp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:23 +02:00
Petter 0de1e5e557
gnu: Add perl-data.
* gnu/packages/perl.scm (perl-data): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 23:30:23 +02:00
ng0 6bf249211d
gnu: gnurl: Update to 7.56.1.
* gnu/packages/gnunet.scm (gnurl): Update to 7.56.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-10-24 17:19:15 -04:00
Efraim Flashner 648c896ad3
gnu: screen: Update to 4.6.2.
* gnu/packages/screen.scm (screen): Update to 4.6.2.
2017-10-24 21:26:19 +03:00
Leo Famulari ae7e24c421
gnu: mupdf: Fix CVE-2017-{14685,14686,14687}.
* gnu/packages/patches/mupdf-CVE-2017-14685.patch,
gnu/packages/patches/mupdf-CVE-2017-14686.patch,
gnu/packages/patches/mupdf-CVE-2017-14687.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pdf.scm (mupdf)[source]: Use them.
2017-10-24 13:44:34 -04:00
Leo Famulari 6dcc8239be
gnu: icu4c: Fix CVE-2017-14952.
* gnu/packages/patches/icu4c-CVE-2017-14952.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/icu4c.scm (icu4c)[replacement]: New field.
(icu4c-fixed): New variable.
2017-10-24 13:10:35 -04:00
Leo Famulari c330c27f7f
gnu: syncthing: Split into two outputs.
* gnu/packages/syncthing.scm (syncthing)[outputs]: New field.
[arguments]: Change the 'install' and 'install-docs' phases to install to the
two outputs.
2017-10-24 13:10:35 -04:00
Leo Famulari 1899ef0b83
gnu: syncthing: Use install-source? to disable installing the source code.
* gnu/packages/syncthing.scm (syncthing): Set #:install-source? #f
instead of deleting the install-source phase.
2017-10-24 13:10:35 -04:00
Petter 22473f6964
gnu: Add perl-types-path-tiny.
* gnu/packages/perl.scm (perl-types-path-tiny): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:32 +02:00
Petter 35aaf4b1bd
gnu: Add perl-type-tiny-xs.
* gnu/packages/perl.scm (perl-type-tiny-xs): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:32 +02:00
Petter 237edb6d1f
gnu: Add perl-test-taint.
* gnu/packages/perl.scm (perl-test-taint): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:32 +02:00
Petter cb2f48e7f2
gnu: Add perl-term-size-any.
* gnu/packages/perl.scm (perl-term-size-any): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:32 +02:00
Petter fcbc997e03
gnu: Add perl-term-size-perl.
* gnu/packages/perl.scm (perl-term-size-perl): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:32 +02:00
Petter a1798ee3c7
gnu: Add perl-devel-hide.
* gnu/packages/perl.scm (perl-devel-hide): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:31 +02:00
Petter 8ae0558aad
gnu: Add perl-sort-naturally.
* gnu/packages/perl.scm (perl-sort-naturally): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:31 +02:00
Petter b6cd89084d
gnu: Add perl-proc-invokeeditor.
* gnu/packages/perl.scm (perl-proc-invokeeditor): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:31 +02:00
Petter b44ecca691
gnu: Add perl-archive-extract.
* gnu/packages/compression.scm (perl-archive-extract): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 18:38:31 +02:00
Ricardo Wurmus 5aeb661134
gnu: Add perl-gnupg-interface.
* gnu/packages/gnupg.scm (perl-gnupg-interface): New variable.

Co-authored-by: Petter <petter@mykolab.ch>
2017-10-24 18:38:31 +02:00
Leo Famulari 6ee4fd2ae1
gnu: borg: Split up the monolithic man page.
* gnu/packages/backup.scm (borg)[arguments]: Rewrite 'install-docs'
phase to install one man page per Borg sub-command.
2017-10-24 10:21:51 -04:00
Leo Famulari db4411b42b
gnu: python-docutils: Update to 0.14.
* gnu/packages/python.scm (python-docutils, python2-docutils): Update to 0.14.
2017-10-24 10:21:51 -04:00
Petter 85f225fbf7
gnu: Add perl-xml-twig.
* gnu/packages/xml.scm (perl-xml-twig): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 10:40:49 +02:00
Marius Bakke 91f2daa58d
gnu: curl: Update replacement to 7.56.1 [fixes CVE-2017-1000257].
* gnu/packages/curl.scm (curl-7.56.0): Rename to ...
(curl-7.56.1): ... this.  Update to 7.56.1.
(curl)[replacement]: Adjust accordingly.
2017-10-24 08:09:47 +02:00
Danny Milosavljevic fc9a93cbf9
gnu: claws-mail: Re-enable vcalendar.
* gnu/packages/mail.scm (claws-mail): Use module (gnu packages calendar).
[inputs]: Add libical.
2017-10-24 08:07:24 +02:00
Marius Bakke 62d48234e2
gnu: git: Update to 2.14.3.
* gnu/packages/version-control.scm (git): Update to 2.14.3.
2017-10-24 07:55:34 +02:00
Ricardo Wurmus 306556528e
gnu: Add sorcer.
* gnu/packages/music.scm (sorcer): New variable.
2017-10-24 07:54:43 +02:00
Ricardo Wurmus 2809a355b6
gnu: Add papagayo.
* gnu/packages/animation.scm (papagayo): New variable.
2017-10-24 07:54:43 +02:00
Petter 7a04dddd26
gnu: Add perl-html-tidy.
* gnu/packages/web.scm (perl-html-tidy): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 00:06:21 +02:00
Petter 0a9bdd9583
gnu: Add tidyp.
* gnu/packages/web.scm (tidyp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 00:06:20 +02:00
Petter efc8f7d03d
gnu: Add perl-lwp-online.
* gnu/packages/web.scm (perl-lwp-online): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 00:05:28 +02:00
Petter 9e88b210f6
gnu: Add perl-xml-handler-yawriter.
* gnu/packages/xml.scm (perl-xml-handler-yawriter): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 00:04:15 +02:00
Petter 33b592eed3
gnu: Add perl-xml-sax-writer.
* gnu/packages/xml.scm (perl-xml-sax-writer): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 00:04:15 +02:00
Petter b7c5919514
gnu: Add perl-xml-filter-buffertext.
* gnu/packages/xml.scm (perl-xml-filter-buffertext): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 00:04:14 +02:00
Petter 9e1c358139
gnu: Add perl-tree-xpathengine.
* gnu/packages/xml.scm (perl-tree-xpathengine): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 00:04:14 +02:00
Petter 3b6958021d
gnu: Add perl-xml-xpathengine.
* gnu/packages/xml.scm (perl-xml-xpathengine): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-24 00:04:14 +02:00
Julien Lepiller 6768e0a7a5
gnu: Add java-jboss-javassist.
* gnu/packages/java.scm (java-jboss-javassist): New variable.
2017-10-23 22:55:29 +02:00
Julien Lepiller b12fe1e517
gnu: Add java-assertj.
* gnu/packages/java.scm (java-assertj): New variable.
2017-10-23 22:55:25 +02:00
Julien Lepiller ec4e8ad724
gnu: Add java-guice-servlet.
* gnu/packages/java.scm (java-guice-servlet): New variable.
2017-10-23 22:55:21 +02:00
Julien Lepiller 5766984b06
gnu: Add java-guice.
* gnu/packages/java.scm (java-guice): New variable.
2017-10-23 22:55:18 +02:00
Julien Lepiller 454536e0ce
gnu: Add java-javax-inject.
* gnu/packages/java.scm (java-javax-inject): New variable.
2017-10-23 22:55:14 +02:00
Julien Lepiller 5d104a2756
gnu: Add java-aopalliance.
* gnu/packages/java.scm (java-aopalliance): New variable.
2017-10-23 22:55:12 +02:00
Julien Lepiller 213bb98180
gnu: Add java-eclipse-jetty-servlet-9.2.
* gnu/packages/web.scm (java-eclipse-jetty-servlet-9.2): New variable.
2017-10-23 22:55:09 +02:00
Julien Lepiller fb680f88e9
gnu: Add java-eclipse-jetty-servlet.
* gnu/packages/web.scm (java-eclipse-jetty-servlet): New variable.
2017-10-23 22:55:07 +02:00
Julien Lepiller fa2a23a146
gnu: Add java-eclipse-jetty-security-9.2.
* gnu/packages/web.scm (java-eclipse-jetty-security-9.2): New variable.
2017-10-23 22:55:04 +02:00
Julien Lepiller 8528e20dff
gnu: Add java-eclipse-jetty-security.
* gnu/packages/web.scm (java-eclipse-jetty-security): New variable.
2017-10-23 22:55:02 +02:00
Julien Lepiller e36e2bee46
gnu: Add java-eclipse-jetty-server-9.2.
* gnu/packages/web.scm (java-eclipse-jetty-server-9.2): New variable.
2017-10-23 22:54:58 +02:00
Julien Lepiller 5d38f7e4e8
gnu: Add java-eclipse-jetty-server.
* gnu/packages/web.scm (java-eclipse-jetty-server): New variable.
2017-10-23 22:54:56 +02:00
Julien Lepiller 812c712f7a
gnu: Add java-eclipse-jetty-jmx-9.2.
* gnu/packages/web.scm (java-eclipse-jetty-jmx-9.2): New variable.
2017-10-23 22:54:52 +02:00
Julien Lepiller 4b172061e5
gnu: Add java-eclipse-jetty-jmx.
* gnu/packages/web.scm (java-eclipse-jetty-jmx): New variable.
2017-10-23 22:54:49 +02:00
Julien Lepiller 821869fcf4
gnu: Add java-eclipse-jetty-http-9.2.
* gnu/packages/web.scm (java-eclipse-jetty-http-9.2): New variable.
2017-10-23 22:54:47 +02:00
Julien Lepiller 4a1376d3fd
gnu: Add java-eclipse-jetty-http.
* gnu/packages/web.scm (java-eclipse-jetty-http): New variable.
2017-10-23 22:54:45 +02:00
Julien Lepiller b90012fddf
gnu: Add java-eclipse-jetty-io-9.2.
* gnu/packages/web.scm (java-eclipse-jetty-io-9.2): New variable.
2017-10-23 22:54:42 +02:00
Julien Lepiller b510b7f58f
gnu: Add java-eclipse-jetty-io.
* gnu/packages/web.scm (java-eclipse-jetty-io): New variable.
2017-10-23 22:54:40 +02:00
Julien Lepiller 5010671d4d
gnu: Add java-eclipse-jetty-util-9.2.
* gnu/packages/web.scm (java-eclipse-jetty-util-9.2): New variable.
2017-10-23 22:54:38 +02:00
Julien Lepiller 1657d62ae5
gnu: Add java-eclipse-jetty-util.
* gnu/packages/web.scm (java-eclipse-jetty-util): New variable.
2017-10-23 22:54:35 +02:00
Julien Lepiller 1f985e4497
gnu: Add java-eclipse-jetty-perf-helper.
* gnu/packages/web.scm (java-eclipse-jetty-perf-helper): New variable.
2017-10-23 22:54:33 +02:00
Julien Lepiller 339bef37cd
gnu: Add java-eclipse-jetty-test-helper.
* gnu/packages/web.scm (java-eclipse-jetty-test-helper): New variable.
2017-10-23 22:54:30 +02:00
Julien Lepiller 91072287a6
gnu: Add java-tomcat.
* gnu/packages/web.scm (java-tomcat): New variable.
2017-10-23 22:54:27 +02:00
Julien Lepiller 90a127c7ed
gnu: Add java-hdrhistogram.
* gnu/packages/web.scm (java-hdrhistogram): New variable.
2017-10-23 22:54:12 +02:00
Danny Milosavljevic 1a6497dee4
gnu: Add python2-libmpsse.
* gnu/packages/embedded.scm: Add imports.
(python2-libmpsse): New variable.
2017-10-23 19:11:19 +02:00
Tobias Geerinckx-Rice cc14a90fd3
gnu: borg: Update to 1.1.1.
* gnu/packages/backup.scm (borg): Update to 1.1.1.
2017-10-23 14:49:32 +02:00
Tobias Geerinckx-Rice 57af0d13b2
gnu: python-lmdb: Update to 0.93.
* gnu/packages/databases.scm (python-lmdb): Update to 0.93.
2017-10-23 14:49:32 +02:00
Tobias Geerinckx-Rice afd845368a
gnu: python-peewee: Update to 2.10.2.
* gnu/packages/databases.scm (python-peewee): Update to 2.10.2.
2017-10-23 14:49:31 +02:00
Tobias Geerinckx-Rice 6a4ad78dd6
gnu: python-graphviz: Update to 0.8.1.
* gnu/packages/graphviz.scm (python-graphviz): Update to 0.8.1.
2017-10-23 14:49:31 +02:00
Tobias Geerinckx-Rice 2b1b27990b
gnu: python-graphene: Disable tests.
* gnu/packages/python.scm (python-graphene)[native-inputs]: Remove.
[arguments]: Disable #:tests.
2017-10-23 14:49:30 +02:00
Tobias Geerinckx-Rice f737d9f2fb
gnu: python-pytest-django: Use python-pytest@3.
* gnu/packages/django.scm (python-pytest-django)[propagated-inputs]: Replace
python-pytest with python-pytest-3.0.
2017-10-23 14:49:30 +02:00
Tobias Geerinckx-Rice ce4dfde0d8
gnu: miso: Update to 0.5.4.
* gnu/packages/bioinformatics.scm (miso): Update to 0.5.4.
2017-10-23 14:49:29 +02:00
Efraim Flashner 1ee3079d78
gnu: cowsay: Run tests after install.
* gnu/packages/games.scm (cowsay)[arguments]: Delete 'check phase, add
custom 'check phase after install.
2017-10-23 11:44:17 +03:00
Efraim Flashner 3bf94bc8bc
gnu: criu: Add missing perl input.
* gnu/packages/virtualization.scm (criu)[native-inputs]: Add perl.
2017-10-23 09:50:33 +03:00
Ricardo Wurmus fe420383e1
gnu: Add criu.
* gnu/packages/virtualization.scm (criu): New variable.
2017-10-23 08:09:05 +02:00
Ricardo Wurmus de5308f526
gnu: Add libnet.
* gnu/packages/networking.scm (libnet): New variable.
2017-10-23 08:09:05 +02:00
Ludovic Courtès d298c815e6
gexp: Add 'directory-union'.
* gnu/services.scm (directory-union): Move to...
* guix/gexp.scm (directory-union): ... here.  New procedure.
* doc/guix.texi (G-Expressions): Document it.
2017-10-22 22:09:00 -07:00
Ludovic Courtès dedb512f8f
gexp: Add 'file-union'.
* gnu/services.scm (file-union): Move to...
* guix/gexp.scm (file-union): ... here.  New procedure.
* doc/guix.texi (G-Expressions): Document it.
2017-10-22 22:09:00 -07:00
Maxim Cournoyer 6e644cfdb3
services: base: Add file->udev-rule function.
This function allows passing a file-like object to the udev service.

* gnu/services/base.scm (file->udev-rule): New function.
* doc/guix.texi (Base Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-22 22:09:00 -07:00
Mark H Weaver 2f05dd6b4c
gnu: linux-libre: Update to 4.13.9.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.9.
(%linux-libre-hash): Update hash.
2017-10-23 00:53:38 -04:00
Mark H Weaver 1b635cafac
gnu: linux-libre@4.9: Update to 4.9.58.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.58.
2017-10-23 00:53:03 -04:00
Mark H Weaver 8e4a976c68
gnu: linux-libre@4.4: Update to 4.4.94.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.94.
2017-10-23 00:52:28 -04:00
Mark H Weaver bb234ed825
gnu: icecat: Add more fixes from upstream mozilla-esr52.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr52 repository.
2017-10-23 00:51:34 -04:00
Ludovic Courtès fc938a2775
gnu: lxqt-common: Remove.
This package is marked as deprecated upstream.
Fixes <https://bugs.gnu.org/28823>.

* gnu/packages/lxqt.scm (lxqt-common): Remove.
2017-10-22 16:05:26 -07:00
Ludovic Courtès ed9b09e4f0
gnu: impressive: Fix Python 2/3 dependency mismatch.
* gnu/packages/pdf.scm (impressive)[inputs]: Depend on PYTHON2-PYGAME.
2017-10-22 15:32:19 -07:00