a539ad867d
gnu: r-rhdf5lib: Make build reproducible.
...
* gnu/packages/bioinformatics.scm (r-rhdf5lib)[arguments]: Remove timestamp
and host system kernel version.
2018-03-09 11:40:59 +01:00
d8f46d5234
gnu: hdf5: Do not record the build-time kernel version.
...
* gnu/packages/maths.scm (hdf5)[arguments]: Patch libhdf5.settings to prevent
the kernel version on the build node from affecting the output.
2018-03-09 11:20:22 +01:00
1b5905fe68
gnu: r-fnn: Remove duplicate definition.
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* gnu/packages/cran.scm (r-fnn)[home-page]: Use HTTPS.
* gnu/packages/statistics.scm (r-fnn): Remove.
2018-03-08 23:38:41 +01:00
22a0c65969
gnu: Add r-phangorn.
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* gnu/packages/bioinformatics.scm (r-phangorn): New variable.
2018-03-08 23:31:56 +01:00
be815dbdda
gnu: Add r-smoother.
...
* gnu/packages/cran.scm (r-smoother): New variable.
2018-03-08 23:31:56 +01:00
d10b0952ce
gnu: Add r-fnn.
...
* gnu/packages/cran.scm (r-fnn): New variable.
2018-03-08 23:31:56 +01:00
661bb51e66
gnu: Add r-vim.
...
* gnu/packages/cran.scm (r-vim): New variable.
2018-03-08 23:31:56 +01:00
fc784b6672
gnu: Add r-prroc.
...
* gnu/packages/cran.scm (r-prroc): New variable.
2018-03-08 23:31:56 +01:00
94e46cabc1
gnu: Add r-abind.
...
* gnu/packages/cran.scm (r-abind): New variable.
2018-03-08 23:31:56 +01:00
3a563a410a
gnu: Add r-sqldf.
...
* gnu/packages/cran.scm (r-sqldf): New variable.
2018-03-08 23:31:56 +01:00
3dab50d92a
gnu: Add r-gsubfn.
...
* gnu/packages/cran.scm (r-gsubfn): New variable.
2018-03-08 23:31:56 +01:00
db80dd4a1d
gnu: Add r-psych.
...
* gnu/packages/cran.scm (r-psych): New variable.
2018-03-08 23:31:56 +01:00
35b0c051c5
gnu: Add r-signal.
...
* gnu/packages/cran.scm (r-signal): New variable.
2018-03-08 23:31:55 +01:00
53cc59a1d8
gnu: r-ape: Move to (gnu packages cran).
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* gnu/packages/bioinformatics.scm (r-ape): Move from here...
* gnu/packages/cran.scm (r-ape): ...to here.
2018-03-08 23:31:55 +01:00
b7ce825c85
gnu: r-sfsmisc: Update to 1.1-2.
...
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-2.
2018-03-08 23:31:55 +01:00
69c38faa91
gnu: r-nmf: Update to 0.21.0.
...
* gnu/packages/statistics.scm (r-nmf): Update to 0.21.0.
2018-03-08 23:31:55 +01:00
1b17fdbe41
gnu: r-openssl: Update to 1.0.1.
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* gnu/packages/statistics.scm (r-openssl): Update to 1.0.1.
2018-03-08 23:31:55 +01:00
bbf8540d43
gnu: python-sympy, python2-sympy: Only run core tests.
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* gnu/packages/python.scm (python-sympy, python2-sympy)[arguments]: Move tests
after installation; run only core tests.
2018-03-08 23:14:10 +01:00
1f3921e143
doc: Explain what we mean by root in binary installation.
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* doc/guix.texi (Binary Installation): Add explicit instructions to become root.
2018-03-08 22:03:19 +01:00
fee7f8a94e
gnu: nano: Update to 2.9.4.
...
* gnu/packages/nano.scm (nano): Update to 2.9.4.
2018-03-08 20:29:20 +02:00
84c195e505
gnu: r-dropbead: Update to 0-2.d746c6f.
...
* gnu/packages/bioinformatics.scm (r-dropbead): Update to 0-2.d746c6f.
2018-03-08 18:53:49 +01:00
7f2f834550
gnu: milkytracker: Actually link with the JACK library.
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* gnu/packages/music.scm (milkytracker)[arguments]: Add appropriate configure
flag.
2018-03-08 10:09:29 -05:00
3e25d2b22e
gnu: python-msgpack-transitional: Use a distinct name.
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* gnu/packages/python.scm (python-msgpack-transitional)[name]: New field.
2018-03-08 13:23:22 +01:00
875fe4b6b6
gnu: nghttp2: Use a fixed variant of tzdata for tests.
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* gnu/packages/web.scm (nghttp2)[native-inputs]: Replace TZDATA with TZDATA-FOR-TESTS.
2018-03-08 13:23:22 +01:00
c32e3ddedd
services: agetty: Call default-serial-port only when starting.
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* gnu/services/base.scm (agetty-shepherd-service): Call default-serial-port
only when starting.
2018-03-08 13:16:30 +01:00
770986d541
gnu: feh: Update to 2.25.1.
...
* gnu/packages/image-viewers.scm (feh): Update to 2.25.1.
2018-03-08 12:25:05 +01:00
dffc5ab5e4
vm: Use 9p mount tags below 32 chars.
...
Fixes <https://bugs.gnu.org/30667 >.
Reported by Björn Höfling <bjoern.hoefling@bjoernhoefling.de>.
* gnu/system/vm.scm (file-system->mount-tag): Use 'sha1' to compute the
tag.
2018-03-08 11:56:20 +01:00
33286075b9
hash: Add 'sha1'.
...
* guix/hash.scm (GCRY_MD_SHA1): New macro.
(bytevector-hash): New procedure.
(sha256): Express in terms of 'bytevector-hash'.
(sha1): New procedure.
* tests/hash.scm ("sha1, empty", "sha1, hello"): New tests.
2018-03-08 11:56:20 +01:00
3aab885144
gnu: guile: Add 2.2.2.
...
* gnu/packages/guile.scm (guile-2.2.2): New variable.
2018-03-08 11:56:20 +01:00
ca1499ce20
gnu: intelmetool, me-cleaner: Restrict to Intel platforms.
...
* gnu/packages/flashing-tools.scm (intelmetool)[supported-systems]: New
field.
(me-cleaner)[supported-systems]: New field.
2018-03-08 11:56:20 +01:00
338e2852b5
gnu: python-ddt: Update to 1.1.2.
...
* gnu/packages/python.scm (python-ddt): Update to 1.1.2.
2018-03-08 09:07:30 +01:00
ef20a6f0b4
gnu: python-ddt: Mark up description.
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* gnu/packages/python.scm (python-ddt)[description]: Use @dfn.
2018-03-08 09:07:30 +01:00
3d63422c92
gnu: yapet: Update to 1.1.
...
* gnu/packages/password-utils.scm (yapet): Update to 1.1.
2018-03-08 09:07:29 +01:00
f95e9a6bca
gnu: keepassxc: Update to 2.3.1.
...
* gnu/packages/password-utils.scm (keepassxc): Update to 2.3.1.
2018-03-08 09:07:29 +01:00
6e076b3d50
gnu: slurm: Update to 17.11.3.
...
* gnu/packages/parallel.scm (slurm): Update to 17.11.3.
2018-03-08 09:07:28 +01:00
254a88199f
gnu: global: Replace GLOBAL with GNU GLOBAL in description.
...
* gnu/packages/code.scm (global)[description]: Replace GLOBAL with GNU GLOBAL.
2018-03-08 09:01:12 +01:00
a89bf3318f
gnu: vulkan-icd-loader: Update to 1.1.70.0.
...
* gnu/packages/vulkan.scm (vulkan-icd-loader): Update to 1.1.70.0.
2018-03-08 08:53:19 +01:00
e2d0cf033e
gnu: sunxi-tools: Add cross-libc's "static" output.
...
* gnu/packages/admin.scm (sunxi-tools)[native-inputs]: Add cross-libc's
"static" output.
2018-03-08 01:41:22 +01:00
e7988175d9
gnu: sunxi-tools: Improve build error reporting.
...
* gnu/packages/admin.scm (sunxi-tools)[arguments]<#:phases>[set-environment-up]:
Improve build error reporting.
2018-03-08 01:41:20 +01:00
f43857d65d
gnu: emacs-slack: Update to 0-3.9272460.
...
* gnu/packages/emacs.scm (emacs-slack): Update to 0-3.9272460.
2018-03-08 01:24:02 +01:00
0bdd5b8ab7
gnu: Add pigx-rnaseq.
...
* gnu/packages/bioinformatics.scm (pigx-rnaseq): New variable.
2018-03-07 23:25:36 +01:00
e2cafc2449
gnu: Add r-algdesign.
...
* gnu/packages/cran.scm (r-algdesign): New variable.
2018-03-07 22:43:38 +01:00
f64fea1d2c
gnu: Add r-radiant-data.
...
* gnu/packages/cran.scm (r-radiant-data): New variable.
2018-03-07 22:18:38 +01:00
5d9b82acfc
gnu: Add r-shinyace.
...
* gnu/packages/cran.scm (r-shinyace): New variable.
2018-03-07 22:18:38 +01:00
a00968b7a8
gnu: Add r-import.
...
* gnu/packages/cran.scm (r-import): New variable.
2018-03-07 22:18:38 +01:00
b2dc4cb41c
gnu: Add r-cgdsr.
...
* gnu/packages/cran.scm (r-cgdsr): New variable.
2018-03-07 22:18:38 +01:00
12ff7f3fc7
gnu: glibc: Add a comment in the patch.
...
* gnu/packages/patches/glibc-allow-kernel-2.6.32.patch: Add a comment.
2018-03-07 21:39:32 +01:00
036ed3a830
gnu: glibc-2.26-patch: Remove unneeded 'replacement' field.
...
* gnu/packages/base.scm (glibc-2.26-patched): Remove unneeded
'replacement' field.
2018-03-07 21:39:32 +01:00
7c788ed227
gnu: commencement: 'glibc-final' inherits the replacement of 'glibc'.
...
That was the intent of commit b672a81607https://lists.gnu.org/archive/html/guix-devel/2018-02/msg00435.html >.
* gnu/packages/commencement.scm (glibc-final): Use 'package/inherit' so
that we inherit the 'replacement' of GLIBC.
2018-03-07 21:39:32 +01:00
0fccb24765
gnu: commencement: 'glibc-final' now inherits from 'glibc'.
...
* gnu/packages/commencement.scm (glibc-final): Inherit from GLIBC
instead of GLIBC-FINAL-WITH-BOOTSTRAP-BASH.
[propagated-inputs]: New fields.
2018-03-07 21:39:32 +01:00
Ricardo Wurmus