f89aa1521a
Merge branch 'master' into core-updates
2018-04-10 00:42:22 -04:00
33d82486d5
gnu: vc: Do not optimize for the build machine CPU.
...
* gnu/packages/maths.scm (vc)[arguments]: Add "-DTARGET_ARCHITECTURE=none" to
#:configure-flags.
2018-04-08 22:32:24 +02:00
36ce25f092
gnu: Add qtoctave.
...
* gnu/packages/maths.scm (qtoctave): New variable.
2018-03-31 14:05:25 -04:00
ab5f3f2131
gnu: octave: Add audio and more sparse matrix support.
...
* gnu/packages/maths.scm (octave)[inputs]: Add suitesparse, libsndfile,
portaudio and alsa-lib.
2018-03-31 14:05:16 -04:00
5576cfabf3
Merge branch 'master' into core-updates
2018-03-29 17:34:41 +02:00
910deec66c
gnu: Add tcalc.
...
* gnu/packages/maths.scm (tcalc): New variables.
Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2018-03-28 17:13:00 +02:00
1dc3109707
gnu: scotch: Use predictable source URI.
...
* gnu/packages/maths.scm (scotch)[source]: Use predictable URI.
2018-03-25 20:01:02 +02:00
7112b2f148
gnu: openlibm: Update to 0.5.5.
...
* gnu/packages/maths.scm (openlibm): Update to 0.5.5.
2018-03-25 20:01:00 +02:00
e0bee0de70
gnu: ceres-solver: Update to 1.14.0.
...
* gnu/packages/maths.scm (ceres-solver): Update to 1.14.0.
2018-03-25 00:36:32 +01:00
ac21be848a
Merge branch 'master' into core-updates
2018-03-20 14:22:06 -04:00
4a78fd4617
Correct name and Email for ng0.
...
* .mailmap: Correct name and Email for ng0.
* Makefile.am, doc/guix.texi, etc/completion/fish/guix.fish
gnu/packages/accessibility.scm, gnu/packages/admin.scm,
gnu/packages/audio.scm, gnu/packages/autotools.scm,
gnu/packages/cdrom.scm, gnu/packages/check.scm,
gnu/packages/cinnamon.scm, gnu/packages/compression.scm,
gnu/packages/crypto.scm, gnu/packages/databases.scm,
gnu/packages/django.scm, gnu/packages/dns.scm,
gnu/packages/emacs.scm, gnu/packages/enlightenment.scm,
gnu/packages/fonts.scm, gnu/packages/fontutils.scm,
gnu/packages/forth.scm, gnu/packages/fvwm.scm,
gnu/packages/games.scm, gnu/packages/gl.scm,
gnu/packages/gnome.scm, gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm,
gnu/packages/gtk.scm, gnu/packages/guile-wm.scm,
gnu/packages/guile.scm, gnu/packages/haskell-check.scm,
gnu/packages/haskell-crypto.scm, gnu/packages/haskell.scm,
gnu/packages/image-viewers.scm, gnu/packages/image.scm,
gnu/packages/irc.scm, gnu/packages/language.scm,
gnu/packages/libcanberra.scm, gnu/packages/linux.scm,
gnu/packages/lisp.scm, gnu/packages/lolcode.scm,
gnu/packages/lxde.scm, gnu/packages/lxqt.scm,
gnu/packages/mail.scm, gnu/packages/markup.scm,
gnu/packages/mate.scm, gnu/packages/maths.scm,
gnu/packages/mc.scm, gnu/packages/messaging.scm,
gnu/packages/music.scm, gnu/packages/ncurses.scm,
gnu/packages/networking.scm, gnu/packages/nickle.scm,
gnu/packages/openbox.scm, gnu/packages/pdf.scm,
gnu/packages/perl-check.scm, gnu/packages/perl.scm,
gnu/packages/python-crypto.scm, gnu/packages/python-web.scm,
gnu/packages/python.scm, gnu/packages/qt.scm,
gnu/packages/ruby.scm, gnu/packages/rust.scm,
gnu/packages/scheme.scm, gnu/packages/serialization.scm,
gnu/packages/shells.scm, gnu/packages/ssh.scm,
gnu/packages/suckless.scm, gnu/packages/tbb.scm,
gnu/packages/telephony.scm, gnu/packages/text-editors.scm,
gnu/packages/textutils.scm, gnu/packages/time.scm,
gnu/packages/tls.scm, gnu/packages/tor.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vim.scm, gnu/packages/web.scm,
gnu/packages/wm.scm, gnu/packages/xdisorg.scm,
gnu/packages/xfce.scm, gnu/packages/xml.scm,
gnu/packages/xorg.scm, gnu/services/certbot.scm,
gnu/services/desktop.scm, gnu/services/version-control.scm,
gnu/services/web.scm, guix/import/hackage.scm,
guix/licenses.scm: Likewise.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2018-03-20 17:17:58 +01:00
647888845c
Merge branch 'master' into core-updates
2018-03-20 00:49:05 -04:00
63e07468b3
gnu: Add ruby-asciimath.
...
* gnu/packages/maths.scm (ruby-asciimath): New variable.
2018-03-18 10:23:49 +00:00
9f388b1ee1
Merge branch 'master' into core-updates
2018-03-17 01:18:37 -04:00
6cbee49d66
gnu: All snippets report errors using exceptions, else return #t.
...
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
gnu/packages/backup.scm, gnu/packages/base.scm,
gnu/packages/bioinformatics.scm, gnu/packages/cdrom.scm,
gnu/packages/chez.scm, gnu/packages/code.scm, gnu/packages/compression.scm,
gnu/packages/cross-base.scm, gnu/packages/crypto.scm, gnu/packages/cups.scm,
gnu/packages/databases.scm, gnu/packages/dns.scm, gnu/packages/emacs.scm,
gnu/packages/emulators.scm, gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm, gnu/packages/fpga.scm,
gnu/packages/freedesktop.scm, gnu/packages/ftp.scm, gnu/packages/games.scm,
gnu/packages/gcc.scm, gnu/packages/geo.scm, gnu/packages/ghostscript.scm,
gnu/packages/gl.scm, gnu/packages/glib.scm, gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm, gnu/packages/graphics.scm, gnu/packages/gtk.scm,
gnu/packages/guile.scm, gnu/packages/irc.scm, gnu/packages/java.scm,
gnu/packages/kerberos.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm,
gnu/packages/lxde.scm, gnu/packages/machine-learning.scm,
gnu/packages/mail.scm, gnu/packages/maths.scm, gnu/packages/messaging.scm,
gnu/packages/monitoring.scm, gnu/packages/mp3.scm, gnu/packages/music.scm,
gnu/packages/netpbm.scm, gnu/packages/networking.scm, gnu/packages/node.scm,
gnu/packages/nvi.scm, gnu/packages/ocaml.scm, gnu/packages/pdf.scm,
gnu/packages/perl.scm, gnu/packages/php.scm, gnu/packages/plotutils.scm,
gnu/packages/pretty-print.scm, gnu/packages/profiling.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python-crypto.scm,
gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/robotics.scm,
gnu/packages/sawfish.scm, gnu/packages/scanner.scm, gnu/packages/scheme.scm,
gnu/packages/scribus.scm, gnu/packages/sdl.scm,
gnu/packages/serialization.scm, gnu/packages/shells.scm,
gnu/packages/slang.scm, gnu/packages/smalltalk.scm, gnu/packages/ssh.scm,
gnu/packages/sync.scm, gnu/packages/syncthing.scm, gnu/packages/tbb.scm,
gnu/packages/terminals.scm, gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm, gnu/packages/textutils.scm,
gnu/packages/tls.scm, gnu/packages/unrtf.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm, gnu/packages/xdisorg.scm, gnu/packages/xorg.scm:
In all snippets, report errors using exceptions, or else return #t.
2018-03-16 09:08:31 -04:00
47653b3933
gnu: octave: Update to 4.2.2.
...
* gnu/packages/maths.scm (octave): Update to 4.2.2.
2018-03-15 19:11:15 +01:00
799ad71bfc
gnu: Add r-desolve.
...
* gnu/packages/maths.scm (r-desolve): New variable.
2018-03-15 10:57:51 -04:00
41835f947e
gnu: Add r-subplex.
...
gnu/packages/maths.scm (r-subplex): New variable.
2018-03-15 10:57:51 -04:00
c0edb5b543
gnu: arpack-ng: Update to 3.5.0; use 3.3.0 for julia.
...
Partly fixes <https://bugs.gnu.org/30282 >.
* gnu/packages/maths.scm (arpack-ng): Update to 3.5.0.
[native-inputs]: New field.
(arpack-ng-3.3.0): New variable.
* gnu/packages/julia.scm (julia)[inputs]: Use ARPACK-NG-3.3.0.
2018-03-12 16:09:24 +01:00
d8f46d5234
gnu: hdf5: Do not record the build-time kernel version.
...
* gnu/packages/maths.scm (hdf5)[arguments]: Patch libhdf5.settings to prevent
the kernel version on the build node from affecting the output.
2018-03-09 11:20:22 +01:00
bd041e7fd3
gnu: dionysus: Update to 1.4.0.
...
* gnu/packages/maths.scm (dionysus): Update to 1.4.0.
2018-02-28 14:42:36 +02:00
0181df537f
gnu: wxmaxima: Update to 18.02.0.
...
* gnu/packages/maths.scm (wxmaxima): Update to 18.02.0.
[source]: Add patch.
[build-system]: Use the cmake-build-system.
[native-inputs]: Remove autoconf and automake.
[arguments]: Disable tests, remove 'autoconf' phase.
* gnu/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-24 18:05:52 -05:00
853b029209
gnu: vc: Update to 1.3.3.
...
* gnu/packages/maths.scm (vc): Update to 1.3.3.
2018-02-23 13:18:32 -05:00
a89e0cf581
gnu: lpsolve: Update to 5.5.2.5.
...
* gnu/packages/maths.scm (lpsolve): Update to 5.5.2.5.
2018-02-21 15:02:49 +01:00
6c96b5452c
gnu: lpsolve: Update phase style.
...
* gnu/packages/maths.scm (lpsolve)[arguments]: Use INVOKE and
INSTALL-FILE, and end phases with #t.
2018-02-21 15:02:48 +01:00
ff9d1a2f0c
Merge branch 'master' into core-updates
2018-02-18 00:39:25 +01:00
445929e038
gnu: glpk: Update to 4.65.
...
* gnu/packages/maths.scm (glpk): Update to 4.65.
2018-02-16 22:08:03 +01:00
288b8fd5e9
Merge branch 'master' into core-updates
2018-02-13 13:17:15 -05:00
637584253f
gnu: r-pracma: Update to 2.1.4.
...
* gnu/packages/maths.scm (r-pracma): Update to 2.1.4.
2018-02-13 16:18:41 +01:00
4dba441c2a
gnu: hdf5: Build with -fPIC.
...
* gnu/packages/maths.scm (hdf5)[arguments]: Add -fPIC to CFLAGS and CXXFLAGS.
2018-02-12 15:29:43 +01:00
efe2a2833c
Merge branch 'master' into core-updates
2018-02-09 01:46:34 -05:00
ed0c5d3c58
gnu: mcrl2: Fix typo in synopsis.
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* gnu/packages/maths.scm (mcrl2)[synopsis]: Fix typo.
[description]: Use @dfn.
2018-02-08 14:42:32 +01:00
5b05dce747
gnu: Add mcrl2.
...
* gnu/packages/maths.scm (mcrl2): New variable.
2018-02-08 08:50:06 +01:00
e7ca634912
Merge branch 'master' into core-updates
2018-02-03 22:46:07 -05:00
c684008992
gnu: slepc: Apply invoke to configure flags.
...
Follow-up to 94a1eb96d3
2018-02-02 08:26:59 -06:00
e01397b489
gnu: Add Elemental.
...
* gnu/packages/maths.scm (elemental): New variable.
2018-02-02 08:26:59 -06:00
bee7bb315c
Merge branch 'master' into core-updates
2018-02-01 13:18:47 +01:00
cc809f1636
gnu: slepc: Update to 3.8.2.
...
* gnu/packages/maths.scm (slepc): Update to 3.8.2.
2018-01-29 00:23:27 +01:00
3c524f2153
gnu: slepc: Update licence.
...
SLEPc has been released under a 2-clause BSD licence since version 3.8.
* gnu/packages/maths.scm (slepc)[licence]: Switch to bsd-2.
2018-01-29 00:23:27 +01:00
94a1eb96d3
gnu: fbcat, slepc: Use INVOKE.
...
* gnu/packages/linux.scm (fbcat)[arguments]: Substitute INVOKE for
SYSTEM*.
* gnu/packages/maths.scm (slepc)[arguments]: Likewise.
2018-01-29 00:23:27 +01:00
59cd0ba4ab
gnu: openspecfun: Update to 0.5.3.
...
* gnu/packages/maths.scm (openspecfun): Update to 0.5.3.
2018-01-29 00:23:27 +01:00
a4f393b71f
gnu: opencascade-oce: Fix build with glibc 2.26.
...
* gnu/packages/patches/opencascade-oce-glibc-2.26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (opencascade-oce)[source]: Use it.
2018-01-16 15:24:49 -08:00
23de2e1d5f
Merge remote-tracking branch 'origin/master' into core-updates
2017-12-31 14:10:25 +02:00
dc7d6d4ece
gnu: Fix copyright symbol.
...
* gnu/packages/maths.scm: Fix copyright line for Dave Love.
2017-12-24 20:51:48 +01:00
e9960d8cba
gnu, doc: Use HTTPS for cran.r-project.org home pages.
...
* gnu/packages/bioinformatics.scm (r-sparql, r-acsnminer, r-gkmsvm)
(r-maldiquant, r-gprofiler)[home-page]: Use HTTPS.
* gnu/packages/cran.scm (r-colorspace, r-auc, r-calibrate, r-shape)
(r-compare, r-proxy, r-sp, r-rmtstat, r-lmtest, r-inline, r-bbmle)
(r-lpsolve, r-energy, r-suppdists, r-ksamples, r-cvst, r-drr, r-prodlim)
(r-ddalpha, r-rcpproll, r-ipred, r-psych, r-truncnorm, r-rsolnp, r-laeken)
(r-vcd, r-ica, r-scatterplot3d)[home-page]: Likewise.
* gnu/packages/machine-learning.scm (r-adaptivesparsity, r-kernlab)
[home-page]: Likewise.
* gnu/packages/maths.scm (r-quadprog, r-pracma)[home-page]: Likewise.
* gnu/packages/statistics.scm (r-boot, r-cluster, r-codetools, r-foreign)
(r-kernsmooth, r-nlme, r-mgcv, r-rpart, r-dichromat, r-estimability)
(r-pheatmap, r-labeling, r-magrittr, r-munsell, r-rcolorbrewer, r-sendmailr)
(r-gdtools, r-acepack, r-formula, r-locfit, r-chron, r-coda, r-backports)
(r-brew, r-commonmark, r-rstudioapi, r-plotrix, r-gridbase, r-bitops)
(r-catools, r-xnomial, r-lambda-r, r-whoreadsthis, r-futile-options)
(r-futile-logger, r-segmented, r-snow, r-iterators, r-foreach, r-doparallel)
(r-domc, r-irlba, r-registry, r-e1071, r-bigmemory-sri, r-r-methodss3)
(r-tidyselect, r-base64, r-runit, r-sfsmisc, r-gtools, r-gdata, r-gplots)
(r-ztable, r-vipor, r-sourcetools, r-statmod, r-compquadform, r-mixtools)
(r-fastica, r-diptest, r-modeltools, r-flexmix, r-deoptimr, r-pcapp)
(r-rrcov, r-fit-models, r-robust, r-trimcluster, r-fpc, r-fnn)
(r-modelmetrics, r-nloptr, r-lme4, r-tclust, r-lubridate)[home-page]:
Likewise.
* gnu/packages/web.scm (r-htmltools, r-hwriter, r-rjson, r-rook)[home-page]:
Likewise.
* doc/guix.texi (Invoking guix import, Invoking guix refresh): Likewise.
2017-12-24 16:12:13 +01:00
493937ae1f
gnu: openblas: Build with LAPACK.
...
* gnu/packages/maths.scm (openblas)[arguments]: Don't disable LAPACK;
add set-extralib phase.
[inputs]: Add fortran-lib.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-12-23 20:37:40 +01:00
f76fc96866
Merge branch 'master' into core-updates
2017-12-21 13:58:35 -05:00
677bc34d5b
gnu: Remove redundant cmake libdir configure flags.
...
* gnu/packages/bioinformatics.scm (imp)[arguments]: Remove
CMAKE_INSTALL_LIBDIR flag.
* gnu/packages/calendar.scm (libical): Same.
* gnu/packages/engineering.scm (kicad): Same.
* gnu/packages/games.scm (openrct2, mgba): Same.
* gnu/packages/gl.scm (virtualgl): Same.
* gnu/packages/image-processing.scm (mia): Same.
* gnu/packages/linux.scm (rdma-core): Same.
* gnu/packages/machine-learning.scm (dlib): Same.
* gnu/packages/maths.scm (lapack, superlu, z3): Same.
* gnu/packages/password-utils.scm (keepassxc): Same.
* gnu/packages/photo.scm (darktable): Same.
* gnu/packages/rdesktop.scm (freerdp): Same.
2017-12-19 19:52:01 +02:00
a8db968fa4
gnu: wxmaxima: Update to 17.10.1.
...
* gnu/packages/maths.scm (wxmaxima): Update to 17.10.1.
2017-12-19 11:26:16 -05:00
32cd878be0
Merge branch 'master' into core-updates
2017-12-19 01:42:40 +01:00
Mark H Weaver